ID GU108584; SV 1; linear; genomic RNA; STD; VRL; 2231 BP. XX AC GU108584; XX DT 31-DEC-2010 (Rel. 107, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 3) XX DE Grapevine associated partitivirus-1 isolate Ctg474 putative RNA-dependent DE RNA polymerase gene, complete cds. XX KW GDS. XX OS Grapevine associated partitivirus-1 OC Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae. XX RN [1] RP 1-2231 RX DOI; 10.1007/s00705-010-0869-8. RX PUBMED; 21140178. RA Al Rwahnih M., Daubert S., Urbez-Torres J.R., Cordero F., Rowhani A.; RT "Deep sequencing evidence from single grapevine plants reveals a virome RT dominated by mycoviruses"; RL Arch. Virol. 156(3):397-403(2011). XX RN [2] RP 1-2231 RA Al Rwahnih M., Daubert S., Golino D., Rowhani A.; RT ; RL Submitted (14-OCT-2009) to the INSDC. RL Department of Plant Pathology, University of California, Davis, One Shields RL Avenue, Davis, CA 95616, USA XX DR MD5; b2a8260f5ee65cb7ea075d105c5d7533. DR EuropePMC; PMC3044836; 21140178. XX FH Key Location/Qualifiers FH FT source 1..2231 FT /organism="Grapevine associated partitivirus-1" FT /host="Vitis vinifera cv. Syrah" FT /isolate="Ctg474" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="10-Jun-2008" FT /db_xref="taxon:908835" FT CDS 85..2190 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:E7BMW6" FT /db_xref="UniProtKB/TrEMBL:E7BMW6" FT /protein_id="ADO60922.1" FT /translation="MLPKIRDYFHEKLKRLLFDHKIFSSQHEDPEQTAARHASSDIERI FT YKSIHNYAPHPDVIHDYEAQYQHIHDTLVTKQSLSGFNAEFYRLRTDPVPDNRIPPSGI FT TLLPFEYKSMNTVTATLEVPESGFHIHPKIERLVRSRYPQYLTFVRKYTRPLGTTDATV FT ADFFKPQTPSAPVEPERISHIMTHVMKKMAITPYRPLHFVDTQYDKRPLHTGTGYFNRR FT SIVQNVHAMFSYPKEYESKPSSKGYYINAFLESARSLVHWIKSTGTPFRHAPSNLADSL FT RTFFLQRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLTIESMLTFPAHVIARKLECCIM FT YGFETIRGSNAALDTIAQSYKSFFTIDWSGFDQRLPWVIAVLFFTEFIPRLLVINHGYA FT PTYEYPSYPDLTTTDMVSRLNNLLTFLSTWYFNMVYVTADGYSYTRHLAGVPSGMLNTQ FT FLGSFGNLVLITDGLIEYGFTDHEIDNLLLFIMGDDNSGFTHWSIARLESFIQWFETYT FT LHRYGMVLSKTKSVITVLRQRIETLGYQCNFGHPRRPIGKLVAQLCYPERGPRPKYMSA FT RAVGMAWASCAQDKTFHDFCRDVYYEFLDEREEIDETTYGMLQSYLPGYLRIDESVRQT FT INFNEFPSLEHVFSTVRKWKGPLSYQPKWDLAHFVYQPDVIPPNSQTLHEYWQLHNYKM FT PILYNLF" XX SQ Sequence 2231 BP; 597 A; 651 C; 343 G; 640 T; 0 other; aagttctctc cagcacgcct cccggccgct cagaaattta cagaataatt cttcatagaa 60 tattactctt cactcctgtc tacaatgcta ccaaagatcc gagactactt tcacgaaaaa 120 ctcaaacgct tattgttcga ccataaaatc ttttcatccc aacatgaaga tcctgaacaa 180 actgccgctc gacacgcctc ctccgatatt gaaagaatct acaaatctat tcacaactac 240 gcgcctcacc ccgacgtcat ccacgactac gaagcacaat accagcacat acacgatact 300 ctcgttacca aacaatcctt atctggattt aatgctgaat tttaccgctt aagaaccgat 360 cctgtccctg acaatcgaat tcctccctca ggtattacac tcctcccctt cgaatacaag 420 tcaatgaata ctgtcaccgc aacgctcgaa gtccccgaat ctggatttca cattcatccg 480 aaaatcgaac gcctcgtccg ctcaagatac ccacagtatc ttactttcgt tagaaaatac 540 acccgccccc tcggcaccac cgacgccacc gtcgctgatt tctttaagcc tcagactccc 600 tccgctcccg ttgaacccga acgcatctct catattatga ctcatgtaat gaagaaaatg 660 gctattacgc cttatcgtcc tctacacttt gtcgatactc aatatgacaa gagacctcta 720 catactggca ctggctactt taaccgccgt tccatcgtac aaaacgttca cgctatgttc 780 tcctacccga aagaatatga atcgaagccc tcctccaaag gttactatat taatgctttc 840 cttgaatccg ctcgatcgct cgtccattgg attaaatcca ccggaacacc tttccgtcac 900 gcaccttcca acctcgctga ctccttacga acattcttcc ttcaacgtcc aactatgctt 960 ttcacccgca atcacatctc tgatcgtgat ggtaatttaa aacaacgtcc tgtatatgca 1020 gtcgatgatc tattccttac aatagaatca atgctgacat ttcccgctca cgttatcgct 1080 cgaaaactcg aatgctgtat tatgtacggc tttgaaacta tccgtggctc caacgccgcc 1140 ctcgacacca tcgctcaatc atacaagtct ttcttcacaa tagactggtc tggttttgat 1200 caacgcctcc cctgggttat tgctgttctg tttttcacag aattcattcc ccgattgctc 1260 gttattaatc atggctacgc tccaacatat gagtacccct catatcctga cctcacaacc 1320 actgacatgg tttcccgcct caacaacctt cttacctttt tatccacttg gtattttaat 1380 atggtttacg ttactgcaga tggctactct tacacacgcc acctagctgg tgtaccttct 1440 ggtatgctta acacgcagtt cctcggctca ttcggaaatc tagtcctcat cactgatggt 1500 ttaatcgaat atggttttac cgaccatgaa atcgacaacc ttctcctatt tataatgggt 1560 gatgataact ctggttttac ccactggtca attgcacgac tcgaatcatt catacaatgg 1620 tttgaaacct ataccctcca tcgatatgga atggtcttat ctaagactaa atccgttatc 1680 actgtcctac gacagcgaat cgaaactcta ggttaccaat gcaattttgg acacccccgc 1740 cgccccatcg gcaaactcgt cgctcagctc tgctatccag agcgtggtcc acgacccaaa 1800 tacatgtctg ctcgcgcagt cggcatggcc tgggcctcgt gtgctcaaga caagacattc 1860 cacgacttct gtcgcgatgt ctattacgag ttcctcgatg aacgagaaga aattgatgaa 1920 actacctacg gtatgttaca atcttatctt cccggctatc ttagaattga tgaatctgtc 1980 cgccagacga tcaactttaa tgagttcccc tcacttgaac atgtgttctc cacagttcga 2040 aaatggaaag gacctttgtc ctaccaacca aaatgggatt tagctcattt cgtctaccaa 2100 cctgacgtga ttccacctaa ttcacaaact ttgcacgaat attggcaatt acacaactac 2160 aaaatgccta ttctatacaa tctcttttag tttacagttt tactataatt cttctgtcac 2220 tttttaatta c 2231 //