ID GU076453; SV 1; circular; genomic DNA; STD; VRL; 2770 BP. XX AC GU076453; XX DT 16-DEC-2010 (Rel. 107, Created) DT 16-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Tomato yellow leaf curl virus-[Jiroft:Iran] isolate TYLCV-OM[IR:Ji31p:06], DE complete genome. XX KW . XX OS Tomato yellow leaf curl virus-[Jiroft:Iran] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2770 RX DOI; 10.1371/journal.ppat.1001164. RX PUBMED; 21060815. RA Lefeuvre P., Martin D.P., Harkins G., Lemey P., Gray A.J., Meredith S., RA Lakay F., Monjane A., Lett J.M., Varsani A., Heydarnejad J.; RT "The spread of tomato yellow leaf curl virus from the Middle East to the RT world"; RL PLoS Pathog. 6(10):E1001164-E1001164(2010). XX RN [2] RP 1-2770 RA Heydarnejad J., Varsani A.; RT ; RL Submitted (07-OCT-2009) to the INSDC. RL Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman RL Ave, Kerman, Kerman 7616914111, Iran XX DR MD5; 9f9e49d50a16e85fe8ed0e1871d825b5. XX FH Key Location/Qualifiers FH FT source 1..2770 FT /organism="Tomato yellow leaf curl virus-[Jiroft:Iran]" FT /host="Solanum lycopersicum" FT /isolate="TYLCV-OM[IR:Ji31p:06]" FT /mol_type="genomic DNA" FT /country="Iran" FT /collection_date="2006" FT /db_xref="taxon:761706" FT gene 129..479 FT /gene="V2" FT CDS 129..479 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:E7BM27" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BM27" FT /protein_id="ADG37303.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQAPIMDVQAHV FT PKAQNIPNVSKP" FT gene 289..1065 FT /gene="V1" FT CDS 289..1065 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:E7BMA0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BMA0" FT /protein_id="ADG37304.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGSCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPITATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1062..1466) FT /gene="C3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:E7BM29" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BM29" FT /protein_id="ADG37305.1" FT /translation="MDSRTGELITAHQAQNGVFIWEIENPLYFKITNHDERPFLTSHDI FT ISIQIRFNHNIRKVLGIHKCYLNFQIWTTLRPQTGRFLRVFRYQVLKYLDNLGVISINN FT VIRAVDHVLYDVLENTLNVIESHDIKYKFY" FT gene complement(1207..1614) FT /gene="C2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:E7BM30" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BM30" FT /protein_id="ADG37306.1" FT /translation="MQPSSPSTSHCSQLPIKIQHRIAKTKPVRRKRIDLDCGCSYYLHI FT NCINHGFTHRGTHHCSSSPEWRFYMGDRKSPVFQDHQPRRETISNEPRHHFNTDKIQSQ FT HQEGTGDSQMLSQLPNLDDLTASDWSFLKSI" FT gene complement(1538..2602) FT /gene="C1" FT CDS complement(1538..2602) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:E7BMA3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BMA3" FT /protein_id="ADG37307.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSTHFHPNIQGAKSSSDVKTYM FT EKDGDILDHGVFQVDGRSARGGCQSTNDAYAEAINAGSKAQALNILKEKAPRDFLLQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FSTANQNTTPHSED" FT gene complement(2152..2445) FT /gene="C4" FT CDS complement(2152..2445) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BM98" FT /protein_id="ADG37308.1" FT /translation="MGLLTCMFSSNSKESSSARTIDSSTSPPQPGQHISIRTFRELKAQ FT AMSKPTWRKTETSLIMEFSRSMEDQLEEVANLQTTHMPRQSTQGPKLRPSIY" XX SQ Sequence 2770 BP; 742 A; 529 C; 625 G; 874 T; 0 other; accggatggc cgcgccccac gtgggtccca cacacgtcgc tatcatccaa tcaaattgat 60 gactgaaacg ttagataatt gtttatttgt ccttataaac ttagtcccca agtttgttgt 120 cttgcaatat gtgggatcca cttcttaatg aatttcctga atccgttcac ggatttcgtt 180 gtatgttagc tattaaatat ttgcaggccg ttgaggaaac gtatgagccc aacactttgg 240 gccacgattt aattagggat cttatatctg ttgtaagggc tcgtgactat gtcgaagcga 300 cccggcgata taatcatttc cacgcccgtc tcgaaggttc gccgaaggct gaacttcgac 360 agcccctaca gcagccgtgc tgctgccccc attgtccaag gcataaacaa gcgccgatca 420 tggacgtaca ggcccatgta ccgaaagccc agaatatacc gaatgtatcg aagccctgat 480 gttccccgtg gatgtgaagg ctcatgtaaa gtccagtctt atgagcaacg ggatgatatt 540 aagcatactg gtattgtacg ttgtgttagt gatgttactc gtggatccgg aattacccac 600 agagtgggta agaggttctg tgttaaatcc atatattttt taggtaaagt ttggatggat 660 gaaaatatca agaagcagaa tcacactaat caggtcatgt tcttcttggt ccgtgataga 720 aggccctatg gaaacagccc aatggatttt gggcaggttt ttaatatgtt cgataatgag 780 cctattaccg caaccgtgaa gaatgatctc cgggataggt ttcaagtgat gaggaaattt 840 catgctacag tcattggtgg accatctgga atgaaggaac aggctttagt taagagattt 900 tttaaaatta acagtcatgt aacttataat catcaggagg cagccaagta tgagaaccat 960 actgaaaacg ccttgttatt gtatatggca tgtacgcatg cttctaatcc agtgtatgca 1020 actatgaaaa tacgtatcta tttctatgat tcaatatcaa attaataaaa tttatatttt 1080 atatcatgac tttctattac atttagtgtg ttttcaagta catcatacaa tacatgatca 1140 actgctctaa ttacattgtt tatggaaatt acacctaaat tatctaaata tttaagaact 1200 tgatatctaa atactcttaa gaaacgacca gtctgaggcc gtaaggtcgt ccagatttgg 1260 aagttgagat aacatttgtg aatccccagt accttcctga tgttgtgatt gaatcttatc 1320 tgtattgaaa tgatgtcgtg gctcgttaga aatggtctct cgtcgtggtt ggtgatcttg 1380 aaatacaggg gattttctat ctcccatata aaaacgccat tctgggcttg atgagcagtg 1440 atgagttccc cggtgcgtga atccatgatt gatgcagttg atgtggaggt aatatgagca 1500 tccgcagtcg aggtctatgc gcttacgtct gactggctta gtcttcgcta tgcggtgttg 1560 tattttgatt ggcagttgag aacagtggct cgtagagggt gacgaaggtt gcattcttga 1620 gagcccaatt ttttaaggat atgttttttt cttcgtctag atattcccta tatgatgagg 1680 taggtcctgg attgcagagg aagatagtgg gaattccccc tttaatttga atgggcttcc 1740 cgtactttgt gttgctttgc cagtccctct gggcccccat gaattctttg aagtgcttta 1800 aataatgcgg gtctacgtca tcaatgacgt tgtaccacgc atcattactg tacacctttg 1860 gacttaggtc tagatgtcca cataaataat tatgtgggcc tagagacctg gcccacattg 1920 ttttgcctgt tctgctatca ccctcgatga caatactatt aggtctccat ggccgcgcag 1980 cggaagacat gacgttctct gacacccata cttcaagttc ctctggaact tgattaaaag 2040 aagaagataa aaatggagaa atataaggag ccggaggctc ctgaaaaatc ctatctaaat 2100 tactatttaa attatgaaat tggagtagaa agtctcttgg ggctttctcc tttagtatat 2160 tgagggcctg agctttggac cctgcgttga ttgcctcggc atatgcgtcg tttgtagatt 2220 ggcaacctcc tctagctgat cttccatcga cctggaaaac tccatgatca aggatgtctc 2280 cgtctttctc catgtaggtt ttgacatcgc ttgagctttt agctccctga atgttcggat 2340 ggaaatgtgt tgacctggtt ggggaggtga ggtcgaagaa tctattgttc ttgcactgga 2400 actttccttc gaattggatg agaacatgca agtgaggagt cccatcttcg tgaagctctc 2460 tgcagattct aatgaatttt ttggaagtgg gtgtttggag atttaataat tgggaaagtg 2520 cttcttcttt agtaagagag cacttgggat aagtgagaaa ataatttttg gcatttattt 2580 taaaccgatt gggggctgcc atgctggctt agtcaatcgg tgtctctcaa tttgctctat 2640 gtatcggtgt actggagtcc tatatatatg gagactctaa tggcattttg gtaatttggt 2700 aaaggtgcat tgcaattcaa aattcaaaat tcaaaaatca aatcattaaa gcggccatcc 2760 gtataatatt 2770 //