ID GU076451; SV 1; circular; genomic DNA; STD; VRL; 2773 BP. XX AC GU076451; XX DT 16-DEC-2010 (Rel. 107, Created) DT 16-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Tomato yellow leaf curl virus-[Roodan:Iran] isolate TYLCV-OM[IR:Ro25:06], DE complete genome. XX KW . XX OS Tomato yellow leaf curl virus-[Roodan:Iran] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2773 RX DOI; 10.1371/journal.ppat.1001164. RX PUBMED; 21060815. RA Lefeuvre P., Martin D.P., Harkins G., Lemey P., Gray A.J., Meredith S., RA Lakay F., Monjane A., Lett J.M., Varsani A., Heydarnejad J.; RT "The spread of tomato yellow leaf curl virus from the Middle East to the RT world"; RL PLoS Pathog. 6(10):E1001164-E1001164(2010). XX RN [2] RP 1-2773 RA Heydarnejad J., Varsani A.; RT ; RL Submitted (06-OCT-2009) to the INSDC. RL Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman RL Ave, Kerman, Kerman 7616914111, Iran XX DR MD5; 0ea4c24441452fe9c9c1fcd611ba8fa4. XX FH Key Location/Qualifiers FH FT source 1..2773 FT /organism="Tomato yellow leaf curl virus-[Roodan:Iran]" FT /host="Solanum lycopersicum" FT /isolate="TYLCV-OM[IR:Ro25:06]" FT /mol_type="genomic DNA" FT /country="Iran" FT /collection_date="2006" FT /db_xref="taxon:761710" FT gene 148..498 FT /gene="V2" FT CDS 148..498 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:E7BM87" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BM87" FT /protein_id="ADG37291.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQASIMDVQAHV FT PKAQNIQNVSKP" FT gene 308..1084 FT /gene="V1" FT CDS 308..1084 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:E7BM88" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BM88" FT /protein_id="ADG37292.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT MYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="C3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:E7BM89" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BM89" FT /protein_id="ADG37293.1" FT /translation="MDSRTGELITAHQAQNGVFIWEIENPLYFKITNHDERPFLMSHDI FT ISIQIRFNHNIRKVLGIHKCYLNFQIWTTLQPQTGRFLRVFRYQVLKYLDNLGVISINN FT VIRAVDHVLYNVLENTLNVTETHDIKYKFY" FT gene complement(1226..1633) FT /gene="C2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:E7BM90" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BM90" FT /protein_id="ADG37294.1" FT /translation="MQPSSPSTSHCSQVPIKIQHRIAKTKPVRRKRIDLDCGCSYYLHI FT NCINHGFTHRGTHHCSSSPEWRFYMGDRKSPVFQDHQPRREAISNEPRHHFNTDKIQSQ FT HQEGTGDSQMLSQLPNLDDLTASDWSFLKSI" FT gene complement(1557..2621) FT /gene="C1" FT CDS complement(1557..2621) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:E7BM91" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BM91" FT /protein_id="ADG37295.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLASPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDILDHGVFQVDGRSARGGCQSANDAYAEAINAGSKAQALNILKEKAPRDFILQFH FT NLNSNLDRYFQEPPAPYVSPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FSSANQNPTPHSED" FT gene complement(2171..2464) FT /gene="C4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BM92" FT /protein_id="ADG37296.1" FT /translation="MGLLTCMFSSNSKESSSARTIDSSTSPPQPGQHISIRTFRELKAQ FT AMSKPTWRKTETSLIMEFSRSMEDQLEEVANLPTTHMPRQSTQGPKLRPSIY" XX SQ Sequence 2773 BP; 740 A; 537 C; 627 G; 869 T; 0 other; accggatggc cgcccctttt ctttttatgt ggtccccacg agggttccac agacgtcact 60 atcaaccaat caaattgatg actcaaacgt tagataattg tttatttgtc cttataaact 120 tagtccccaa gtttgttgtc ttgcaatatg tgggatccac ttcttaatga attccctgaa 180 tccgttcacg gatttcgttg tatgttagct attaaatatt tgcaggccgt tgaggaaact 240 tacgagccca acactttggg ccacgattta attagggatc ttatatctgt tgtaagggct 300 cgtgactatg tcgaagcgac ccggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccctacag cagccgtgct gctgccccca ttgtccaagg 420 cataaacaag cgtcgatcat ggatgtacag gcccatgtac cgaaagccca gaatatacag 480 aatgtatcga agccctgatg ttccccgtgg atgtgaaggc ccatgtaaag tccagtctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttactcg 600 tggatctgga attacccaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggatggatg aaaatatcaa gaagcagaat cacactaatc aggttatgtt 720 cttcttggtc cgtgatagaa ggccctatgg aagcagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaccgtcaag aatgacctcc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt cattggtgga ccctctggaa tgaaggaaca 900 ggctttagtt aagagatttt ttagaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtat gagaatcata ctgaaaacgc cttgttattg tatatggcat gtacacatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgtatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt ttctgttaca tttaatgtgt tttcaagtac 1140 attatacaat acatgatcaa ctgctctaat tacattgttt atggaaatta cacctaaatt 1200 atctaaatat ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taaggtcgtc cagatttgga agttgagata acatttgtga atccccagta ccttcctgat 1320 gttgtgattg aatcttatct gtattgaaat gatgtcgtgg ctcattagaa atggcctctc 1380 gtcgtggttg gtgatcttga aatacagggg attttctatc tcccatataa aaacgccatt 1440 ctgggcttga tgagcagtga tgagttcccc ggtgcgtgaa tccatgattg atgcagttga 1500 tgtggaggta atacgagcat ccgcagtcga ggtctatgcg cttacgtctg actggcttag 1560 tcttcgctat gcggtgttgg attttgattg gcacttgaga acagtggctc gtagagggtg 1620 acgaaggttg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggtttccc gtattttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt ataccacgca 1860 tcattactgt atacctttgg acttaggtct agatgtccac acaaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgccggtt ctgctatcac cctcgatgac aatactgtta 1980 ggtctccatg gccgcgcagc ggaagacatg acgttctctg acacccatac ttcaagttcc 2040 tctggaactt gattaaaaga tgaagataaa aagggagaaa cataaggagc cggaggctcc 2100 tgaaaatacc tatctaaatt actatttaaa ttatggaatt ggagtataaa gtctcttggg 2160 gctttctcct tcagtatatt gagggcctga gctttggacc ctgcgttgat tgcctcggca 2220 tatgcgtcgt tggcagattg gcaacctcct ctagctgatc ttccatcgac ctggaaaact 2280 ccatgatcaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct tgagctttta 2340 gctccctgaa tgttcggatg gaaatgtgct gacctggttg gggaggcgag gtcgaagaat 2400 ctattgttct tgcactggaa ctttccttcg aattggatga gaacatgcaa gtgaggagtc 2460 ccatcttcgt gaagctctct gcagattcta atgaattttt tggaagtggg tgtttggaga 2520 tttaataatt gggaaagtgc ttcctcttta gtaagagagc acttgggata agtgagaaaa 2580 taatttttgg catttatttt aaaccgattg ggggctgcca tgctgactta gtcaatcggt 2640 gtctctcaat ttgctctatg tatcggtgta ctggagtcct atatatatgg agactctaat 2700 ggcataattg taataaaaga actttaattt gaatttcaaa tgaaaaggct aaagcggcca 2760 tccgtctaat att 2773 //