ID GU076450; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC GU076450; XX DT 16-DEC-2010 (Rel. 107, Created) DT 16-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Tomato yellow leaf curl virus-[Jiroft:Iran] isolate TYLCV-OM[IR:Ji48:07], DE complete genome. XX KW . XX OS Tomato yellow leaf curl virus-[Jiroft:Iran] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2753 RX DOI; 10.1371/journal.ppat.1001164. RX PUBMED; 21060815. RA Lefeuvre P., Martin D.P., Harkins G., Lemey P., Gray A.J., Meredith S., RA Lakay F., Monjane A., Lett J.M., Varsani A., Heydarnejad J.; RT "The spread of tomato yellow leaf curl virus from the Middle East to the RT world"; RL PLoS Pathog. 6(10):E1001164-E1001164(2010). XX RN [2] RP 1-2753 RA Heydarnejad J., Varsani A.; RT ; RL Submitted (06-OCT-2009) to the INSDC. RL Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman RL Ave, Kerman, Kerman 7616914111, Iran XX DR MD5; f5f0fc1d6f827d5b5ff31d55ae723010. XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="Tomato yellow leaf curl virus-[Jiroft:Iran]" FT /host="Solanum lycopersicum" FT /isolate="TYLCV-OM[IR:Ji48:07]" FT /mol_type="genomic DNA" FT /country="Iran" FT /collection_date="2007" FT /db_xref="taxon:761706" FT gene 129..479 FT /gene="V2" FT CDS 129..479 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:E7BM81" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BM81" FT /protein_id="ADG37285.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQASIMDVQAHV FT PKAQNIQNVSKP" FT gene 289..1065 FT /gene="V1" FT CDS 289..1065 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:E7BM82" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BM82" FT /protein_id="ADG37286.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYDQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQERAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1062..1466) FT /gene="C3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:E7BM83" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BM83" FT /protein_id="ADG37287.1" FT /translation="MDSRTGELITAHQAQNGVFIWEIENPLYFKITNHDERPFLMSHDI FT ISIQIRFNHNIRKVLGIHKCYLNFQIWTTLRPQTGRFLRVFRYQVLKYLDNLGVISINN FT VIRAVDHVLYNVLENTINVTETHDIKYKFY" FT gene complement(1207..1614) FT /gene="C2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:E7BM84" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BM84" FT /protein_id="ADG37288.1" FT /translation="MQPSSPSTSHCSQVPIKIQHRIAKTKPVRRKRIDLDCGCSYYLHI FT NCINHGFTHRGAHHCSSSPEWRFYMGDRKSPLFQDHQPRREAISNEPRHHFNTDKIQSQ FT HQEGTGDSQMLSQLPNLDDLTASDWSFLKSI" FT gene complement(1538..2602) FT /gene="C1" FT CDS complement(1538..2602) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:E7BM85" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BM85" FT /protein_id="ADG37289.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFQGKFQCKNNRFFDLTSPTRSPHFHPNIQGANSSSDVQTYM FT EKDGDILDHGVFQVDGRSARGGCQSANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH FT NLNSNLDRYFQEPPAPYVSPFLSSSFNQVPDELEVWVSENVMSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FSSANQNPTPHSED" FT gene complement(2152..2445) FT /gene="C4" FT CDS complement(2152..2445) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BM86" FT /protein_id="ADG37290.1" FT /translation="MGLLTCMFSSNSKESSSARTIDSSTSPPQPGHHTSIRTFRELTAQ FT AMSKPTWRKTETSLIMEFSRSMEDQLEEVANLPTTHMPRQSTQGPKLRPSIY" XX SQ Sequence 2753 BP; 741 A; 524 C; 627 G; 861 T; 0 other; accggatggc cgcgccccac atgggtccca cacacgtcgc tatcatccaa tcaaattgat 60 gactgaaacg ttagataatt gtttatttgt ctttataaac ttaatcccca agtttgttgt 120 cttgcaatat gtgggatcca cttcttaatg aatttcctga atccgttcac ggatttcgtt 180 gtatgttagc tattaaatat ttgcaggccg ttgaggaaac gtatgagccc aacactttgg 240 gccacgattt aattagggat cttatatctg ttgtaagggc tcgtgactat gtcgaagcga 300 cccggcgata taatcatttc cacgcccgtc tcgaaggttc gccgaaggct gaacttcgac 360 agcccctaca gcagccgtgc tgctgccccc attgtccaag gcataaacaa gcgtcgatca 420 tggacgtaca ggcccatgta ccgaaagccc agaatataca gaatgtatcg aagccctgat 480 gttccccgtg gatgtgaagg cccatgtaaa gtccagtctt atgatcaacg ggatgatatt 540 aagcatactg gtattgttcg ttgtgttagt gatgttactc gtggatctgg aattacccac 600 agagtgggta agaggttctg tgttaaatcg atatattttt taggtaaagt ctggatggat 660 gaaaatatca agaagcagaa tcacactaat caggtcatgt tcttcttggt ccgtgataga 720 aggccctatg gaagcagccc aatggatttt ggacaggttt ttaatatgtt cgataatgag 780 ccaagtaccg caaccgtgaa gaatgacctc cgggataggt ttcaagtgat gaggaaattt 840 catgctacag ttattggtgg gccctctgga atgaaagaac aggctttagt taagagattt 900 tttagaatta acagtcatgt aacttataat catcaagaaa gagccaagta cgagaatcat 960 actgaaaacg ccttgttgtt gtatatggca tgtacacatg cctctaaccc agtgtatgca 1020 actatgaaaa tacgcatcta tttctatgat tcaatatcaa attaataaaa tttatatttt 1080 atatcatgag tttctgttac atttattgtg ttttcaagta cattatacaa tacatgatca 1140 actgctctaa ttacattgtt tatggaaatt acacctaaat tatctaaata tttaagaact 1200 tgatatctaa atactcttaa gaaacgacca gtctgaggcc gtaaggtcgt ccagatttgg 1260 aagttgagat aacatttgtg aatccccagt accttcctga tgttgtgatt gaatcttatc 1320 tgtattgaaa tgatgtcgtg gctcattaga aatggcctct cgtcgtggtt ggtgatcttg 1380 aaatagaggg gattttctat ctcccatata aaaacgccat tctgggcttg atgagcagtg 1440 atgagctccc cggtgcgtga atccatgatt gatgcagttg atgtggaggt aatatgagca 1500 tccgcagtcg aggtctatgc gcttacgtct gactggctta gtcttcgcta tgcggtgttg 1560 gattttgatt ggcacttgag aacagtggct cgtagagggt gacgaaggtt gcattcttga 1620 gagcccaatt ttttaaggat atgttttttt cttcgtctag atattcccta tatgatgagg 1680 taggtcctgg attgcagagg aagatagtgg gaattccccc tttaatttga atgggtttcc 1740 cgtattttgt gttgctttgc cagtccctct gggcccccat gaattctttg aagtgcttta 1800 aataatgcgg gtctacgtca tcaatgacgt tgtaccaagc atcattactg tacacttttg 1860 gacttaggtc tagatgtcca cataaataat tatgtgggcc tagagacctg gcccacattg 1920 ttttgcctgt tctgctatca ccctcgatga caatactatt aggtctccat ggccgcgcag 1980 cggaagacat gacgttctcc gacacccata cttcaagttc atctggaact tgattaaaag 2040 atgaagataa aaagggagaa acataaggag ccggaggctc ctgaaaatac ctatctaaat 2100 tactatttaa attatgaaat tggagtagaa agtctcttgg ggctttctcc ttcagtatat 2160 tgagggcctg agctttggac cctgcgttga ttgcctcggc atatgcgtcg ttggcagatt 2220 ggcaacctcc tctagctgat cttccatcga cctggaaaac tccatgatca aggatgtctc 2280 cgtctttctc catgtaggtt tggacatcgc ttgagctgtt agctccctga atgttcggat 2340 ggaagtgtgg tgacctggtt ggggaggtga ggtcgaagaa tctattgttc ttgcactgga 2400 actttccttg gaattggatg agaacatgca agtgaggagt cccatcttcg tgaagctctc 2460 tgcagattct aatgaatttt ttggaagtgg gtgtttggag atttaataat tgggaaagtg 2520 cttcctcttt agtaagagag cacttgggat aagtgagaaa ataatttttg gcatttattt 2580 taaaccgatt gggggctgcc atgctgactt agtcaatcgg tgtctctcaa tttgctctat 2640 gtatcggtgt actggagtcc tatatatatg gagactctaa tggcataatt gtaataaaag 2700 aactttaatt tgaattttaa tgaaaagctt aaagcggcca tccgtctaat att 2753 //