ID GU076443; SV 1; circular; genomic DNA; STD; VRL; 2764 BP. XX AC GU076443; XX DT 16-DEC-2010 (Rel. 107, Created) DT 16-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Tomato yellow leaf curl virus-[Minab:Iran] isolate TYLCV-Ker[IR:Ho33:06], DE complete genome. XX KW . XX OS Tomato yellow leaf curl virus-[Minab:Iran] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2764 RX DOI; 10.1371/journal.ppat.1001164. RX PUBMED; 21060815. RA Lefeuvre P., Martin D.P., Harkins G., Lemey P., Gray A.J., Meredith S., RA Lakay F., Monjane A., Lett J.M., Varsani A., Heydarnejad J.; RT "The spread of tomato yellow leaf curl virus from the Middle East to the RT world"; RL PLoS Pathog. 6(10):E1001164-E1001164(2010). XX RN [2] RP 1-2764 RA Heydarnejad J., Varsani A.; RT ; RL Submitted (06-OCT-2009) to the INSDC. RL Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman RL Ave, Kerman, Kerman 7616914111, Iran XX DR MD5; e0afa04a2e444bd50e722861964b38eb. XX FH Key Location/Qualifiers FH FT source 1..2764 FT /organism="Tomato yellow leaf curl virus-[Minab:Iran]" FT /host="Solanum lycopersicum" FT /isolate="TYLCV-Ker[IR:Ho33:06]" FT /mol_type="genomic DNA" FT /country="Iran" FT /collection_date="2006" FT /db_xref="taxon:761708" FT gene 129..479 FT /gene="V2" FT CDS 129..479 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:E7BM33" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BM33" FT /protein_id="ADG37243.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQAPIMDVQAHV FT PKAQNIQNVSKP" FT gene 289..1065 FT /gene="V1" FT CDS 289..1065 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:E7BM40" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BM40" FT /protein_id="ADG37244.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASIPVYATMKIRIYFYDSISN" FT gene complement(1062..1466) FT /gene="C3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:E7BM35" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BM35" FT /protein_id="ADG37245.1" FT /translation="MDLRTGELITAHQAQNGVFIWEIENPLYFKITNHDERPFLMSHDI FT ISIQIRFNHNIRKVLGIHKCYLNFQIWTTLRPQTGHFLRVFRYQVFKYLDNIGVISINN FT VIRAVDHVLYDVLENTLNVTENHDIKYKFY" FT gene complement(1207..1614) FT /gene="C2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:E7BM36" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BM36" FT /protein_id="ADG37246.1" FT /translation="MQPSSPSTSHCSQVPIKIQHRIAKTKPVRRKRIDLDCGCSYYLHI FT NCINHGFTHRGTHHCSSSPEWRFYMGDRKSPVFQDHQPRREAISNEPRHHFNTDKIQSQ FT HQEGTGDSQMLSQLPNLDDLTASDWSFLKSI" FT gene complement(1538..2602) FT /gene="C1" FT CDS complement(1538..2602) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:E7BM43" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BM43" FT /protein_id="ADG37247.1" FT /translation="MAPPKRFQINCKNYFLTYPKCSLTKEAALSQLQNLQTPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYI FT DKEGDTLDWGEFQIDGRSARGGQQSANDAYAAAINSGSKAEALRVLRELALRDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEMWVSENVMSSAARPWRPKSIIIEGA FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FSSANQNPTPHSED" FT gene complement(2152..2445) FT /gene="C4" FT CDS complement(2152..2445) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BM44" FT /protein_id="ADG37248.1" FT /translation="MGSHISMCLSNSRGNSSAKIRDSSTWYPQAGQHISIQTFRELNPV FT PTSSLTSTRRETPSTGESFRSMEGLQEGDNNLQTTLTPQQLTLEVRQRLLEF" XX SQ Sequence 2764 BP; 752 A; 536 C; 614 G; 862 T; 0 other; accggatggc cgcgccccac gtgggtcccg cacatgtcgc tattgtccaa tcaaattgat 60 gactgaaacg ttagataatt ggttagttgt ccttataaac ttagtcccca agtttgttgt 120 cgtgcaatat gtgggatcca cttcttaatg aatttccgga atccgttcac ggatttcgtt 180 gtatgttagc tattaaatat ttgcaggccg ttgaggaaac gtatgagccc aacactttgg 240 gccacgattt aattagggat cttatatctg ttgtaagggc tcgtgactat gtcgaagcga 300 cccggcgata taatcatttc cacgcccgtc tcgaaggttc gccgaaggct gaacttcgac 360 agcccctaca gcagccgtgc tgctgccccc attgtccaag gcataaacaa gcgccgatca 420 tggacgtaca ggcccatgta ccgaaagccc agaatataca gaatgtatcg aagccctgat 480 gttccccgtg gatgtgaagg cccatgtaaa gtccagtctt atgagcaacg ggatgatatt 540 aagcatacag gtattgttcg ttgtgttagt gatgttactc gtggatccgg aattacccac 600 agagtgggta agaggttctg tgttaaatcc atatattttt taggtaaagt ttggatggat 660 gaaaatatta agaagcagaa tcacactaat caggtcatgt tcttcttggt ccgtgataga 720 aggccctatg gaaacagccc aatggatttt gggcaggttt ttaatatgtt cgataatgag 780 cctagtaccg caaccgtgaa gaatgatctc cgggataggt ttcaagtgat gaggaaattt 840 catgctacag ttattggtgg gccctctgga atgaaggaac aggcattagt taagagattt 900 tttaaaatta acagtcatgt aacttataat catcaagagg cagccaagta tgagaaccat 960 actgaaaacg ccttgttatt gtatatggca tgtacgcatg cctctattcc agtgtatgca 1020 actatgaaaa tacgtatcta tttctatgat tcaatatcaa attaataaaa tttatatttt 1080 atatcatgat tttctgttac atttagtgtg ttttcgagta catcatacaa tacatgatca 1140 actgctctga ttacattgtt aatggaaatt acacctatat tatctaaata tttaaaaact 1200 tgatatctaa atactcttaa gaaatgacca gtctgaggcc gtaaggtcgt ccagatttgg 1260 aagttgagat aacatttgtg aatccccagt accttcctga tgttgtgatt gaatcttatc 1320 tgtattgaaa tgatgtcgtg gctcattaga aatggcctct cgtcgtggtt ggtgatcttg 1380 aaatacaggg gattttctat ctcccatata aaaacgccat tctgggcttg atgagcagtg 1440 atgagttccc cggtgcgtaa atccatgatt gatgcagttg atgtggaggt aatatgagca 1500 tccgcagtcg aggtctatgc gcttacgtct gactggttta gtcttcgcta tgcggtgttg 1560 gattttgatt ggcacttgag aacagtggct cgtagagggt gacgaaggtt gcattcttga 1620 gagcccaatt ttttaaggat atgttttttt cttcgtctag atattcccta tatgatgagg 1680 taggtcctgg attgcagagg aagatagtgg gaattccccc tttaatttga atgggtttcc 1740 cgtattttgt gttgctttgc cagtccctct gggcccccat gaattccttg aagtgcttta 1800 aataatgcgg gtctacgtca tcaatgacgt tataccacgc atcattactg tatacctttg 1860 gacttaggtc tagatgtcca cataaataat tatgtgggcc tagagacctg gcccacattg 1920 ttttgccggt tctgctagca ccctcgatga taatactctt aggtctccat ggccgcgcag 1980 cggaagacat gacgttttcc gacacccaca tttcaagttc ctctggaact tgattaaaag 2040 aagaagataa aaatggagaa atataaggag ccggaggctc ctgaaaaatc ctatctaaat 2100 tactatttaa attatgaaat tgcaaaatat aatctctgag agctaattcc ctcagaactc 2160 taagagcctc tgccttactt ccagagttaa ttgctgcggc gtaagcgtcg tttgcagatt 2220 gttgtccccc tcttgcagac cttccatcga tctgaaactc tccccagtcg agggtgtctc 2280 cctccttgtc gatgtaagac ttgacgtcgg aactggattt agctccctga atgtttggat 2340 ggaaatgtgc tgccctgctt ggggatacca agtcgaagaa tctctgattt tggcacttga 2400 atttcccctc gaattggata agcacatgga gatgtggctc cccattttcg tgaagttccc 2460 tgcaaacttt gatgtatttt ttatttgttg gggtttgtag gttttgtaat tgggaaagtg 2520 ccgcttcttt ggttaatgag cacttaggat atgtgaggaa ataatttttg caatttattt 2580 ggaaacgctt aggaggagcc atatggtcaa tgagtaccga ttgaccaaga atttcaactt 2640 atccctagta tatcggtact caatatatag tgagtagcaa atggcatatt ggtaatttcg 2700 taaaagcatt tttaaaagta aaattcaaaa atcaaaatcc taaagcggcc atccgtataa 2760 tatt 2764 //