ID GQ996948; SV 1; linear; genomic RNA; STD; VRL; 6008 BP. XX AC GQ996948; XX DT 01-APR-2010 (Rel. 104, Created) DT 14-SEP-2011 (Rel. 110, Last updated, Version 3) XX DE Bean pod mottle virus isolate Iowa-Prignitz 10 segment RNA1, complete DE sequence. XX KW . XX OS Bean pod mottle virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-6008 RX DOI; 10.1007/s00705-011-1005-0. RX PUBMED; 21562882. RA Bradshaw J.D., Zhang C., Hill J.H., Rice M.E.; RT "Landscape epidemiology of bean pod mottle comovirus: molecular evidence of RT heterogeneous sources"; RL Arch. Virol. 156(9):1615-1619(2011). XX RN [2] RP 1-6008 RA Bradshaw J.D., Zhang C., Hill J.H., Rice M.E.; RT ; RL Submitted (21-SEP-2009) to the INSDC. RL Department of Plant Pathology, Iowa State University, 351 Bessey Hall, RL Ames, IA 50010, USA XX DR MD5; 5cab59de278058bbc63624956d20a009. XX FH Key Location/Qualifiers FH FT source 1..6008 FT /organism="Bean pod mottle virus" FT /segment="RNA1" FT /host="Glycine max" FT /isolate="Iowa-Prignitz 10" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:12260" FT CDS 370..5925 FT /codon_start=1 FT /product="polyprotein 1" FT /db_xref="GOA:D5IC31" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:D5IC31" FT /protein_id="ADD92352.1" FT /translation="MKFYPGQNVSEIVYHFQSNETANRLDAYFACGCEEDTEVLARLKQ FT CNPRLLHLSYAAFCLEMGSHSVEEIEYDDGELVFLYFQNFLLSIVSNSSKTANLRAYIR FT SAFAYHFQHFVEFDQYTNDSLNVMDTSVSAQGIADLALSMVRWIPTQIKKVVNFGVGSV FT IESFSEHFNKLIMQYCPIVFQAFSWVNNIWTMVKEWIEEAAKEISWFLQGCKELLAWGM FT CILASSCALGLVEKCLISLGMISESFDLVGLFVRSAIVGAFCVSIKTGKFVSNSELITC FT ATIAVSTIATVMSQAFKPSEEIKGQFQALSVLEGLATQLTSFCDTSLIAMGKTCTAFNQ FT ICTAGKNVKVIAGRLLDVVSNFVRKLLGLDSAFLRDAALIFSQDVDGWLRNISWCQEQF FT LLKAYMSQDDLIVLRSLVVKGERMREQMLEGEVKVSPSVCNLIVKGCEEASKLMRESVL FT HCSKTVRKIPFVIFAHGDSRVGKSLLVDRLITDFCDHLEIGEDAVYSRNPSDPFWSGYR FT RQPIVTIDDFAAVASEPSAEAQLIPLISSAPYPLNMASLEEKGMHFDSQIMMCSSNFLE FT PSPEAKIRDDMAFRNRRHVLITVELKPGVEYDESDFTKNQRYLLKTWFHDHYVVDQTFE FT SYADLLAYCFTKWERHVKEQESNLSQIKGKKSESGHFNNFQQLMDLAVSWNLSANIMKE FT RIKADKSDMVYVFSAGRKDKIVHCFLNKEGECSIRPDSIEDPEAQLLLKASETMLMKAY FT AFLKYNNATNLIVRTHLAELVNEDFYDEKFNFIGTIGTPAFHRQIAAHLEKMPLWQKAI FT LCGMGHCLSRKSKETWYSGMKEKFVQMMKSIYETEVTDWPVPLKIISGTILATILGTTF FT WKLFSFLRDAGNGGVFVGNVASAFTTSSVLEAQSRKPNRYEVSQYRYRNVPIKRRAWVE FT GQMSFDQSVVAIMSKCKASMRMGNTDAQILMVPGRRFIAHGHFFKNLTQKVRVQIVTSE FT KSYWHVYDPDKFQMFDNSEIGLYSNPTLEDIPHSAWDLFCWDSEKTLPNNFSAELLSCK FT LDTVTGQYYPEWAPINCRVHRQPIHITEGNYVRKQDVSIEYDACTIPNDCGSLVVAKVG FT NHKQIVGFHVAGSKGRLGYASLIPYVEPVVQAQSAEVYFDFFPVEVDSQEGVAHIGELK FT SGVYVPLPTKTNLVETPKEWQLDLPCDKIPSVLTTTDERLVGTEHEGYDPFLGGIQKYA FT TPMMPLDEEILSKVAQDMVEEWFDCVDEEDSFEEVSLSAALNGVEGLDYMERIPLATSE FT GFPHVLSRKNGEKGKRRFVSGDGEEMTLIPGTSVEEAYNKLIVELEKSVPTLVGIECPK FT DEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDNLSCQVGINPYSME FT WTGLANRLLSKGNDILCCDYASFDGLITKQVMSKMAEMINSLCGGDEKLMRERTHLLLA FT CCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSF FT KNFVSLCVYGDDNLISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLAD FT CDFLKRNFKQMSNVLWVAPEDKASLWSQLHYVSCNNLEMQEAYLVNLVNVLRELYLHSP FT EEARQLRRKALSRIEWLQKADVPTIAQIEEFHSMQRMMNAPDSNDNIDLLLSIDLLGLQ FT GAGKAFPNKIVFDDKLVLANTQEFFDGNFPVDSWLPIFVNCLYPVSQLPSEAVVVNVTC FT GSGRGGLPTTAWISSAVNNRSSDINKRIRTALGKGKKIVFLTRVDPFPVALLAVLFGVK FT NEILSSNATNPMLTRLLENCKSLKYLVDECPFAFVN" XX SQ Sequence 6008 BP; 1749 A; 1002 C; 1303 G; 1954 T; 0 other; tattaaaatt ttcataagat ttgaaatttt gataaaccgc gatcacaggt tgccgcacct 60 taaaaccgga aacaaaagca atcgttactt gttctcaaga atcttcaaac tttcttctgt 120 tttctctgcg ttcggttctt caggaaaaga aaatcactct ctgtattgat tacagacttc 180 gtgaatcatt ttcttttcaa ctttcagttc acttgctgaa cactctccta taaatatata 240 ggacttcgtg tcagatttga actttccctg tctctttctc ggttttcttt cttattctca 300 tcttctttga attttaaggc tcgtattttg tttctttaaa ctttctgttg gactcatttg 360 aaatacaaca tgaagtttta tccaggacaa aatgtctctg aaattgttta ccattttcag 420 agtaatgaga cagctaatag gcttgatgct tattttgcct gtggctgtga agaggatact 480 gaagtcctcg ctcgtttgaa gcaatgtaac cctcggttac tgcatttatc ttatgctgct 540 ttctgtttgg aaatgggcag tcattctgtt gaagaaatag aatatgatga tggagagtta 600 gttttcttgt atttccaaaa ttttctactc tccatagtgt ccaattcttc caaaacagca 660 aatctgagag catacatacg ttcagctttt gcatatcatt ttcagcactt tgttgaattt 720 gatcaatata caaatgattc tctcaatgtg atggatacaa gcgtatctgc tcaaggaatt 780 gcagatttgg ctctgtccat ggtcagatgg attcctactc aaattaaaaa agttgtgaat 840 tttggggtag gatcggtcat agaatccttt tcagaacatt tcaataagct cataatgcaa 900 tattgtccaa tagtgttcca agcttttagc tgggttaaca atatttggac catggttaaa 960 gaatggattg aagaggctgc gaaggaaatt tcttggttcc tgcagggttg taaggaattg 1020 ttagcttggg gaatgtgtat tctggctagt tcctgtgctt tgggattggt tgaaaaatgt 1080 ctcatttctc taggcatgat ttctgaatcc tttgatttgg ttggtttgtt tgtccgatca 1140 gccattgttg gggccttctg tgtttctatc aagacgggca agtttgtttc aaatagtgag 1200 ttgatcacat gtgctaccat tgcagtttct acaattgcaa ctgttatgtc tcaagctttc 1260 aaaccttctg aagaaattaa agggcaattc caggctcttt ctgttttaga gggattggca 1320 acacaactca cttcattttg tgacacatct ttgattgcca tgggaaaaac ttgcacagca 1380 tttaatcaaa tttgtactgc cgggaaaaat gttaaagtga ttgctggcag attgttggat 1440 gtagtttcca attttgtgag gaaacttttg ggattggata gtgcttttct tagagatgca 1500 gcgcttatct tctctcaaga tgttgatggt tggctgcgca atatcagctg gtgtcaggaa 1560 caattcctac tgaaagcata catgtctcaa gatgatctta ttgtcttgcg ttccttagtt 1620 gtcaaaggtg aaagaatgag agagcaaatg ctggaaggag aggttaaagt gtctcctagt 1680 gtttgtaacc ttattgtaaa aggttgtgaa gaagcaagta agttgatgag agaaagtgtg 1740 ctacattgtt caaagactgt acggaaaatt ccatttgtca tttttgcaca cggtgattct 1800 cgtgttggaa aatctttgct agttgataga cttatcacag atttttgtga tcatctagaa 1860 attggggagg atgctgtcta ttcaaggaat ccttcggatc ctttctggag cgggtatagg 1920 agacaaccaa tcgtcactat tgatgatttt gctgctgttg catcagagcc atctgctgag 1980 gctcaattga ttccattaat ttcaagtgct ccatacccat tgaacatggc aagtttagag 2040 gaaaagggaa tgcacttcga ttcccagatc atgatgtgct cttcaaattt tttggaacct 2100 tctcctgaag ccaaaattag agatgacatg gcttttagaa atagaagaca tgttttgata 2160 acagttgagc ttaaacctgg agtggagtat gatgagagcg attttaccaa aaatcagcgg 2220 tatttactca aaacttggtt tcatgatcat tatgttgtag accaaacttt tgaatcttat 2280 gctgatcttt tggcatattg cttcactaaa tgggagagac atgtgaagga acaagagtct 2340 aatttgtctc aaattaaagg caagaaaagt gagagtggcc atttcaataa ttttcaacaa 2400 cttatggatt tggcagtttc atggaatctc agtgcaaata tcatgaagga acgaatcaaa 2460 gctgataaaa gtgatatggt ttatgtcttc tctgctggaa ggaaggacaa aattgtacat 2520 tgcttcttga ataaagaagg cgaatgtagt atacgtcctg attcaataga agatccagaa 2580 gcacaacttt tgctcaaagc ttcagaaact atgctcatga aagcttatgc ttttttgaag 2640 tacaacaatg cgaccaattt gattgtcagg acccatttgg cagaattggt caatgaagac 2700 ttttatgatg aaaaattcaa ttttattggc acaattggga ctccagcttt tcatcgacaa 2760 attgctgcac acttggagaa aatgccatta tggcaaaaag caattttgtg tggaatggga 2820 cattgtttgt ctcggaaaag caaagaaaca tggtattctg ggatgaagga aaaatttgta 2880 caaatgatga agagcatcta tgaaacagaa gttacagatt ggccagtacc actgaaaatc 2940 atttctggaa ccattcttgc aacaattttg ggaacaacct tctggaaact cttttccttt 3000 cttagagatg ctggtaatgg gggagttttt gttggcaatg ttgcttcagc attcacaact 3060 tcaagtgtgc ttgaggccca aagtagaaag cccaacagat atgaagtttc ccaatacaga 3120 tatcgcaatg tgccaataaa gcgcagagca tgggttgaag gccagatgtc tttcgatcag 3180 tctgtagtag caattatgtc taaatgcaaa gccagcatga gaatgggaaa cactgatgct 3240 caaattttga tggttccagg gcgcagattc atagctcatg gacatttttt caaaaatctg 3300 actcagaaag tgcgagtcca aattgttaca tctgaaaaga gttactggca tgtgtatgat 3360 cctgacaagt ttcagatgtt tgacaacagt gaaataggtc tttattctaa tcccactttg 3420 gaagatatcc cacattcagc ttgggacctt ttttgctggg acagtgagaa aactttgcca 3480 aataattttt ctgcagaatt gctctcttgc aaattggata ctgttactgg ccaatattat 3540 cctgagtggg ctccaattaa ttgtcgagtt catcgacaac caattcacat cactgaagga 3600 aattatgtca gaaagcaaga tgtcagcatt gaatatgatg catgcacaat tccaaatgat 3660 tgtggttcat tagttgttgc caaggttgga aatcacaaac aaattgttgg tttccatgtt 3720 gctggaagca aaggaagact gggatatgct tcattgatac catatgttga gccagttgtg 3780 caagctcaaa gtgctgaagt ttactttgac ttcttccctg tggaggttga tagtcaagag 3840 ggagttgctc acattggtga attgaaatct ggtgtctatg ttccactgcc tacaaaaact 3900 aatttggtgg aaactcccaa ggaatggcaa ctggatctac cttgtgacaa aattcctagt 3960 gtcttgacta caactgatga gagattggta ggcacagaac atgagggata tgatcctttt 4020 cttggtggaa ttcaaaaata tgccactccc atgatgcccc tagatgaaga aattctttct 4080 aaggttgcac aagatatggt tgaggaatgg tttgattgtg ttgatgagga ggattccttt 4140 gaggaagttt ctttaagtgc agcactcaat ggtgttgagg gtttggacta tatggaaaga 4200 attcctcttg ccacatctga gggttttcct catgtgcttt cacgcaaaaa tggtgaaaaa 4260 ggcaaaagga gatttgtttc tggggatggt gaagagatga cattgattcc gggaaccagt 4320 gttgaagagg cttacaacaa gctaatagtt gaacttgaga aaagtgttcc tacattggtt 4380 ggcattgaat gtcccaagga tgagaaactt cctcgtcgca aaatttttga caaacctaag 4440 acgcgctgct tcactattct ccctatggag tttaatcttg tggtccgtca gaagttttta 4500 aattttgtga ggttcattat gaagaaaagg gacaacctta gttgtcaagt tggaatcaac 4560 ccatactcca tggaatggac tggtttggcc aatagattac tgagcaaggg caacgacatt 4620 ctgtgttgcg attatgctag ttttgatggt ttgattacca agcaagttat gagcaagatg 4680 gcagaaatga taaacagtct ttgtggtggt gatgaaaaat tgatgcgtga aaggacacac 4740 ctgctgttgg cttgttgttc aaggatggca atttgtaaga aagatgtttg gagagttgaa 4800 tgtggaatcc cttctggatt tccgctcaca gttatttgca atagcatttt taatgagatg 4860 ctcattagat atagctatga aaaattactg cgccaggcta aagctccaag tatgttttta 4920 caatccttca aaaattttgt ttctttgtgt gtgtatggtg atgataactt aattagtgtt 4980 catgaatatg tcaagcctta ctttagtggt tctaaattga aaagctttct agctggtcac 5040 aatatcacca ttactgatgg tattgacaaa actagtgcaa ctttgcaatt tagaaagtta 5100 gcagattgtg attttctcaa gagaaacttt aagcagatgt ctaatgtttt gtgggtggct 5160 cctgaggaca aggcgagttt atggtcacaa cttcattatg tttcgtgtaa taatctggaa 5220 atgcaagaag cttatcttgt caatctcgta aatgtgttac gagaattgta tttgcacagt 5280 ccagaggaag ctcgccaact gagaaggaaa gctctctctc gtattgaatg gctgcaaaaa 5340 gctgatgtgc ctaccatagc acagattgaa gagttccatt cgatgcagag gatgatgaat 5400 gctcctgatt caaatgataa tattgatcta ctgttgagca ttgatttgtt gggtttacaa 5460 ggagcaggta aagcttttcc aaacaagatt gtttttgatg ataagcttgt gttggctaac 5520 acacaagaat tctttgatgg aaattttcca gtggattctt ggttaccaat ttttgtgaat 5580 tgtctttatc ctgtaagtca attaccttca gaagctgtcg ttgtaaatgt tacatgtggt 5640 agtggacgtg gtggtttacc caccactgct tggattagtt ctgcagttaa caatcgctcc 5700 tcagatatca acaaaaggat tcgcacagca cttgggaaag gtaagaaaat tgtttttctt 5760 actagagttg atccttttcc agtagcttta ctggctgttc tttttggcgt taagaatgaa 5820 attctgagtt ctaacgccac taaccctatg ctgacgcgac ttcttgagaa ctgtaagagt 5880 ctcaaatatc tggttgatga gtgtcctttt gcatttgtga actagtatgt aatattttat 5940 tcacttaaat aaagcgcatt actatgtgca atgagtgtgt ttaaatataa aaaaaaaaaa 6000 aaaaaaaa 6008 //