ID GQ861427; SV 1; circular; genomic DNA; STD; VRL; 2791 BP. XX AC GQ861427; XX DT 12-OCT-2009 (Rel. 102, Created) DT 12-OCT-2009 (Rel. 102, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate TYLCV-Mld[JO:Ju:08], complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2791 RA Al Abdallat A.M., Al Debei H.S., Akash M.W., Kvarnheden A.; RT "Agrodrench inoculation confirms the infectivity of two Jordanian isolates RT of Tomato yellow leaf curl virus"; RL Unpublished. XX RN [2] RP 1-2791 RA Al Abdallat A.M., Al Debei H.S., Akash M.W., Kvarnheden A.; RT ; RL Submitted (01-SEP-2009) to the INSDC. RL Horticulture and Crop Science, University of Jordan, Queen Rania Street, RL Amman 11942, Jordan XX DR MD5; 5a387e4de6cd39406b17cfe0e1f8c7dc. XX FH Key Location/Qualifiers FH FT source 1..2791 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="TYLCV-Mld[JO:Ju:08]" FT /mol_type="genomic DNA" FT /country="Jordan" FT /collection_date="2008" FT /db_xref="taxon:10832" FT gene 318..668 FT /gene="V2" FT CDS 318..668 FT /codon_start=1 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:Q77PF9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q77PF9" FT /protein_id="ACX42563.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT gene 478..1254 FT /gene="V1" FT CDS 478..1254 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:D0ENL0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D0ENL0" FT /protein_id="ACX42564.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSNRAAVPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGVVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1251..1655) FT /gene="C3" FT CDS complement(1251..1655) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:D0ENL1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D0ENL1" FT /protein_id="ACX42565.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITDHSQRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1396..1803) FT /gene="C2" FT CDS complement(1396..1803) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q6QP61" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6QP61" FT /protein_id="ACX42566.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRPQPEAISNEPRHHFHSDKIQPQ FT HQEGNGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1712..2791) FT /gene="C1" FT CDS complement(1712..2791) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:D0ENL3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D0ENL3" FT /protein_id="ACX42567.1" FT /translation="MAPPKRFQINCKNYFLTYPHCSLTKEEALSQLKNLETPTNKKYIK FT VCKELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV FT DKDGDTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELVPKDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVMSSAARPWRPNSIIIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPMVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FASINQGPTQDSQEETNKA" FT gene complement(2332..2634) FT /gene="C4" FT CDS complement(2332..2634) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D0ENL4" FT /protein_id="ACX42568.1" FT /translation="MGNHISMCLSNLKGNSNAKINDSSTWYPQAGQHISIQTFRELNPV FT QTSSLMSIRTETPSTGVSFKSTDDLHVGVSNQPMTLTPQLLTQAVSQRLLESLKN" XX SQ Sequence 2791 BP; 765 A; 535 C; 609 G; 882 T; 0 other; atggtcaatg agtaccgatt gaccaagata tttacactta tccctggtgt atcggtactc 60 aatatatagt gagtaccaaa tggcattttg gtaattacat aaaagtacat tgcaattcaa 120 acttcaaaat tcaaaaatca aatcattaaa gcggccatcc gtataatatt accggatggc 180 cgcgcctttt ccttttatgt ggtttccacg agggttcccc agacgtcact gtcaaccaat 240 caaattgcat cctcaaacgt tagataagtt ttcatttgtc tttatatact tggtcgccaa 300 gtattttgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa tctgttcatg 360 gatttcgttg tatgttagct attaaatatt tgcagtccgt tgaggaaact tacgagccca 420 atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc cgtgactatg 480 tcgaagcgac caggcgatat aatcatttcc acgcccgtct cgaaggttcg ccgaaggctg 540 aacttcgaca gcccatacag caaccgtgct gctgtcccca ttgtccaagg cataaacaag 600 cgacgatcat ggacgtacag gcccatgtac cgaaagccca gaatatacag aatgtatcga 660 agccctgatg ttccccgtgg atgtgaaggc ccatgtaaag tccagtctta tgagcaacgg 720 gatgatatta agcacactgg tgttgttcgt tgtgttagtg atgttactcg tggatctgga 780 attactcaca gagtcggtaa gaggttctgt gttaaatcga tatatttttt aggtaaagtc 840 tggatggatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt ctttttggtc 900 cgtgatagaa ggccctatgg aagcagtcca atggattttg gacaggtttt taatatgttc 960 gataatgagc ccagtaccgc aaccgtgaag aatgatttgc gtgacaggtt tcaagtgatg 1020 aggaaatttc atgctacagt tattgggggg ccctctggaa tgaaggaaca ggcattagtt 1080 aagagatttt ttaaaattaa cagtcatgta acttataatc atcaggaggc agccaagtac 1140 gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc ctctaatcca 1200 gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa ttaataaaat 1260 ttatatttta tatcatgagt ttctgttaca tttattgtgt tttcaagtac atcatacaat 1320 acatgatcaa ctgctctgat tacattgtta atggaaatta caccaagact atctaaatac 1380 ttaagaactt catatctaaa tactcttaag aaatgaccag tctgaggctg taatgtcgtc 1440 caaattcgga agttgagaaa acatttgtga atccccatta ccttcctgat gttgtggttg 1500 aatcttatct gaatggaaat gatgtcgtgg ttcattagaa atggcctctg gctgtggtct 1560 gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt ctctgcctga 1620 ggagcagtga tgagttcccc tgtgcgtgaa tccatgatta ttgcagttga ggtggaggta 1680 gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttct tcttggctat 1740 cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg acgaaggttg 1800 cattcttgag agcccaattt ttcaaagata tgtttttttc ttcgtctaga tattctctat 1860 atgaggagtt aggtcctgga ttgcagagga agatagtggg aattccccct ttaatttgaa 1920 tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg aattccttga 1980 agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca tcattactgt 2040 acaccattgg gcttaggtct agatgtccac ataaataatt atgtgggcct agagacctgg 2100 cccacattgt tttgcctgtt ctgctatcac cctcaatgat aatactgtta ggtctccatg 2160 gccgcgcagc ggaagacatg acgttctcgg acacccatac ttcaagttca tctggaactt 2220 gattaaaaga tgaagataaa aagggagaaa tataaggagc cggaggctcc tgaaaaattc 2280 tatctaaatt actatttaaa ttatgaaact gtaaaatata atctttcggt actaattctt 2340 taatgattct aagagcctct gacttactgc ctgagttaag agctgcggcg taagcgtcat 2400 tggctgattg ctgaccccca cgtgcagatc gtccgtcgat ttgaaactca ccccagtcga 2460 cggtgtctcc gtccttatcg acataagact tgacgtctga actggattta gctccctgaa 2520 tgtttggatg gaaatgtgct gccctgcttg gggataccag gtcgaagaat cgttgatttt 2580 ggcatttgaa tttcccttca aattggataa gcacatggag atgtggttcc ccattctcgt 2640 ggagttcttt gcaaactttg atgtattttt tatttgttgg ggtttctagg ttttttaatt 2700 gggaaagtgc ttcttctttt gttaaggagc aatgaggata tgtgaggaaa taatttttgc 2760 aatttatttg gaagcgctta ggaggagcca t 2791 //