ID GQ861426; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC GQ861426; XX DT 12-OCT-2009 (Rel. 102, Created) DT 12-OCT-2009 (Rel. 102, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate TYLCV-IL[JO:Ju:08], complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RA Al Abdallat A.M., Al Debei H.S., Akash M.W., Kvarnheden A.; RT "Agrodrench inoculation confirms the infectivity of two Jordanian isolates RT of Tomato yellow leaf curl virus"; RL Unpublished. XX RN [2] RP 1-2780 RA Al Abdallat A.M., Al Debei H.S., Akash M.W., Kvarnheden A.; RT ; RL Submitted (01-SEP-2009) to the INSDC. RL Horticulture and Crop Science, University of Jordan, Queen Rania Street, RL Amman 11942, Jordan XX DR MD5; 88e153666e50d2bdca0808b0e2967b75. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="TYLCV-IL[JO:Ju:08]" FT /mol_type="genomic DNA" FT /country="Jordan" FT /collection_date="2008" FT /db_xref="taxon:10832" FT gene 313..663 FT /gene="V2" FT CDS 313..663 FT /codon_start=1 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:B4YSZ9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B4YSZ9" FT /protein_id="ACX42557.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT SKAQNIQNVSKP" FT gene 473..1249 FT /gene="V1" FT CDS 473..1249 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:D0ENK4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D0ENK4" FT /protein_id="ACX42558.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGVVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSLMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1246..1650) FT /gene="C3" FT CDS complement(1246..1650) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:D0ENK5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D0ENK5" FT /protein_id="ACX42559.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISFQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1391..1798) FT /gene="C2" FT CDS complement(1391..1798) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:D0ENK6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D0ENK6" FT /protein_id="ACX42560.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFLSDKIQPQ FT HQEGNGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1707..2780) FT /gene="C1" FT CDS complement(1707..2780) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:D0ENK7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D0ENK7" FT /protein_id="ACX42561.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLKTPTNKKYIKVC FT KELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENIVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2336..2629) FT /gene="C4" FT CDS complement(2336..2629) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D0ENK8" FT /protein_id="ACX42562.1" FT /translation="MGNHISMCLSNSKANTNVKTNGSSTWYPQTGQHISIQTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY" XX SQ Sequence 2780 BP; 761 A; 530 C; 597 G; 892 T; 0 other; tttgaaatga atcggtgtcc ctcaaagctc tatggcaatc ggtgtattgg tgtcttactt 60 atacctggac acctaatggc tatttggtaa tttcataaat gttcattgca attcaaaatt 120 caaaatttaa aaatcaaatc attaaagtgg ccatccgtat aatattaccg gatggccgcg 180 cctttctttt tatgtggtcc ccacgagtgt tccaccgatg tcactgtcaa ccaatcaaat 240 tgcatcctca aacgttagat aactgttcat ttgtctttat atacttggtc cccaagtatt 300 ttgtcttaca atatgtggga cccactccta aatgaatttc ctgaatctgt tcacggattt 360 cgttgtatgt tagctattaa atatttgcag tccgttgagg aaacttacga gcccaataca 420 ttgggccacg atttaattag ggatcttata tctgttgtaa gggcccgtga ctatgtcgaa 480 gcgaccaggc gatataatca tttccacgcc cgtctcgaag gttcgccgaa ggctgaactt 540 cgacagccca tacagcagcc gtgctgctgt ccccattgtc caaggcacaa acaagcgacg 600 atcatggacg tacaggccca tgtatcgaaa gcccagaata tacagaatgt atcgaagccc 660 tgatgttccc cgtggatgtg aaggcccatg taaagtccag tcttatgaac aacgtgatga 720 tattaagcat actggtgttg ttcgttgtgt aagtgatgtt actcgtggat ctggaattac 780 tcacagagtg ggtaagaggt tctgtgttaa atcgatatat tttttaggta aagtctggat 840 ggatgaaaat atcaagaagc agaatcacac taatcaggtc atgttcttct tggtccgtga 900 tagaaggccc tatggaagca gcccaatgga ttttggacag gtttttaata tgttcgataa 960 tgagcccagt accgcaaccg tgaagaatga tttgcgggat aggtttcaag tgatgaggaa 1020 atttcatgct acagttattg gtgggccctc tttaatgaag gaacaggctt tagttaagag 1080 attttttaaa attaacagtc atgtaactta taatcatcaa gaggcagcta agtatgagaa 1140 ccatactgaa aacgccttgt tattgtatat ggcatgtacg catgcctcta atccagtgta 1200 tgcaactatg aaaatacgca tctatttcta tgattcaata tcaaattaat aaaatttata 1260 ttttatatca tgagtttctg ttacatttat tgtgttttca agtacatcat acaatacatg 1320 atcaactgct ctaattacat tgttaatgga aattacacca agactatcta aatacttaag 1380 aacttcatat ctaaatactc ttaagaaatg accagtctga ggctgtaatg tcgtccaaat 1440 tcggaagttg agaaaacatt tgtgaatccc cattaccttc ctgatgttgt ggttgaatct 1500 tatctgaaag gaaatgatgt cgtggttcat tagaaatggc ctctggctgt gttctgttat 1560 cttgaaatag aggggattgt ttatctccca gataaaaacg ccattctctg cctgaggagc 1620 agtgatgagt tcccctgtgc gtgaatccat gattattgca attgagatgg aggtagtatg 1680 agcagccaca gtctaggtct acacgcttac gccttattgg tttcttcttg gctatcttgt 1740 gttggacctt gattgatact tgcgaacagt ggctcgtaga gggtgacgaa ggttgcattc 1800 ttgagagccc aatttttcaa ggatatgttt ttttcttcgt ctagatattc cctatatgag 1860 gaggtaggtc ctggattgca gaggaagata gtgggaattc cccctttaat ttgaatgggc 1920 ttcccgtact ttgtgttgct ttgccagtcc ctctgggccc ccatgaattc cttgaagtgc 1980 tttaaataat gcgggtctac gtcatcaatg acgttgtacc acgcatcatt actgtacacc 2040 tttgggctta ggtctagatg tccacataaa taattatgtg ggcctagaga cctggcccac 2100 attgttttgc ctgttctgct atcaccctca atgacaatac ttatgggtct ccatggccgc 2160 gcagcggaag acacgatgtt ctcggcgacc cactcttcaa gttcatctgg aacttgatta 2220 aaagaagaag aaagaaatgg agaaacataa acttctaaag gaggactaaa aatcctatct 2280 aaatttgaac ttaaattatg aaattgtaaa atatagtcct ttggggcctt ctcttttaat 2340 atattgaggg cctcggattt actgcctgaa ttgagtgctt cggcatatgc gtcgttggca 2400 gattgctgac ctcctctagc tgatctgcca tcgatttgga aaactccaaa atcaatgaag 2460 tctccgtctt tctccacgta ggtcttgaca tctgttgagc tcttagctgc ctgaatgttt 2520 ggatggaaat gtgctgacct gtttggggat accaggtcga agaaccgttg gtttttacat 2580 tggtatttgc cttcgaattg gataagcaca tggagatgtg gttccccatt ctcgtggagt 2640 tctttgcaaa ctttgatgta ttttttattt gttggggttt ttaggttttt taattgggaa 2700 agtgcttcct ctttagagag agaacaattg ggatatgtta ggaaataatt cttggcatat 2760 attttaaata aacgaggcat 2780 //