ID   GQ857550; SV 1; linear; genomic RNA; STD; VRL; 1506 BP.
XX
AC   GQ857550;
XX
DT   12-OCT-2009 (Rel. 102, Created)
DT   12-OCT-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Hippeastrum mosaic virus isolate Alaska polyprotein gene, partial cds.
XX
KW   .
XX
OS   Hippeastrum mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1506
RA   Robertson N.L.;
RT   "First Alaskan report of Hippeastrum mosaic virus in amaryllis";
RL   Unpublished.
XX
RN   [2]
RP   1-1506
RA   Robertson N.L.;
RT   ;
RL   Submitted (31-AUG-2009) to the INSDC.
RL   United States Department of Agriculture, Agricultural Research Service, 533
RL   E. Fireweed Ave., Palmer, AK 99645, USA
XX
DR   MD5; 074749f833be11b2905404a6a558b4e7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1506
FT                   /organism="Hippeastrum mosaic virus"
FT                   /host="Hippeastrum hybrid cultivar"
FT                   /isolate="Alaska"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:421010"
FT   CDS             <1..1383
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and coat protein"
FT                   /db_xref="GOA:D0EM92"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:D0EM92"
FT                   /protein_id="ACX42384.1"
FT                   /translation="TVVDNTLMVMLAMQYSLAKLGVDFEEQESVIKYFANGDDLLIAVH
FT                   PDFCDRILNQLGGLFSQLGLIYDFTHRTQEKSELFYLSHCGVLKDGIYVPKLEKERIVS
FT                   ILEWDKSSEPIQRLEAICAAIIESWGYDDLIHEIRTFYSWVLEQAPYNELAKEGKAPYL
FT                   AELALKHLYTDEKIDASELLDYVRKFQNLFDDELPQDDCVFQSQVDAGDERAVEKAKKA
FT                   DKDVDAGTSGVMPIIQAKSFSRSMKMPQIKGKKILDLSHLLQYKPAAEDLYNTKASQAQ
FT                   LEYWYNGVMNTYEVNSDEMAKVLNGLIVWCIENGTSPNLRDTWRMEFSGTFVEYPLQPI
FT                   IEFAQPSLRQIMRHFSNIAESYIVMRNQTERYMPRYAIQRGLTDYSLARYAFDFYDVTA
FT                   QTSVRAREAIAQMKAAALRGANSKLFTLDGKVGTAVEDTERHTVEDVNRNMHSMLGVRG
FT                   VI"
XX
SQ   Sequence 1506 BP; 458 A; 281 C; 364 G; 403 T; 0 other;
     actgttgtgg acaacactct tatggttatg ttagccatgc agtattcact tgccaagctt        60
     ggagtggact ttgaagagca agagagcgta ataaagtatt tcgctaatgg agatgacctc       120
     ttgatagcag tgcatccaga tttctgtgat cgaattttaa atcagcttgg aggtctattt       180
     agccagcttg gattaattta tgattttaca cacagaacac aagaaaaatc cgagttgttt       240
     tacttatctc actgtggtgt attgaaagat ggaatctacg taccaaaact cgaaaaagag       300
     cgcattgtgt caatattgga gtgggacaag agcagcgagc caattcaaag gcttgaggct       360
     atctgtgctg cgataatcga gtcatggggt tatgatgact tgattcatga aattcgcact       420
     ttttattctt gggtccttga acaagcacca tacaatgaat tggcaaagga gggaaaggcc       480
     ccgtacttgg cagaattggc actcaaacat ttgtacacgg acgaaaagat agatgcctct       540
     gaactgttgg attacgtacg taaattccaa aatttgtttg acgatgaact gcctcaagat       600
     gattgcgtgt ttcaatctca agtggatgcc ggtgatgaaa gagctgtcga aaaggcgaag       660
     aaagctgata aggacgtgga tgcaggaact tctggggtca tgccaattat acaagccaag       720
     tctttttcca gatcgatgaa gatgcctcag attaaaggaa agaagatact ggatttgtcg       780
     catctcttgc agtataaacc agcagcagag gatttgtaca acacgaaggc aagtcaagca       840
     caacttgagt actggtacaa tggcgtgatg aacacttatg aggttaactc ggatgagatg       900
     gcgaaggttt taaatggatt gatcgtatgg tgtattgaaa acggaacttc gccaaatttg       960
     agagatacat ggcgcatgga attttcgggg acttttgtgg agtacccgct gcaaccaatt      1020
     attgaatttg cgcaaccttc gttgcgacaa ataatgcgcc actttagcaa catcgctgaa      1080
     tcgtatattg tgatgcgaaa tcagacagag cgttacatgc cacgatatgc aattcagaga      1140
     ggacttaccg actacagcct agctcgctac gctttcgact tctacgatgt caccgctcag      1200
     acatcggtaa gggcgagaga agccattgct caaatgaaag cagcggcact tagaggcgcg      1260
     aactcgaaac tgtttacact tgatggcaaa gtcgggacag cggttgaaga tacagagcga      1320
     catacggttg aagatgtcaa tcgtaacatg cactcgatgc taggggtgcg cggtgtcatt      1380
     taatcggtct aatttagcac ttatgagttt ttcataaata aacttatatt tagcgaaatt      1440
     tccacttcat ggcgcaccta gtgatgtctt acatcccaac aggtgaatta tgaaattgga      1500
     aaaaaa                                                                 1506
//