ID   GQ478667; SV 2; circular; genomic DNA; STD; VRL; 1368 BP.
XX
AC   GQ478667;
XX
DT   23-SEP-2009 (Rel. 102, Created)
DT   27-APR-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Nanovirus-like particle isolate Sriganganagar, complete genome.
XX
KW   .
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1368
RA   Kumar A., Kumar J., Khan J.A.;
RT   "Nanovirus-like particle associated rep protein isolate Sriganganagar,
RT   Rajasthan, India";
RL   Unpublished.
XX
RN   [2]
RP   1-1368
RA   Kumar A., Kumar J., Khan J.A.;
RT   ;
RL   Submitted (14-AUG-2009) to the INSDC.
RL   Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL   Marg, Lucknow, U.P. 226 001, India
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1368
RA   Kumar A., Kumar J., Khan J.A.;
RT   ;
RL   Submitted (20-APR-2010) to the INSDC.
RL   Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL   Marg, Lucknow, U.P. 226 001, India
XX
DR   MD5; 492a892ed99b1a3bc693e6c38a31c877.
XX
CC   On Apr 20, 2010 this sequence version replaced gi:258642522.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1368
FT                   /organism="Nanovirus-like particle"
FT                   /host="cotton"
FT                   /isolate="Sriganganagar"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Sriganganagar, Rajasthan"
FT                   /isolation_source="leaf tissue"
FT                   /collected_by="Abhinav Kumar"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:96892"
FT   gene            77..1030
FT                   /gene="rep"
FT   CDS             77..1030
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:C9E9Z8"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:C9E9Z8"
FT                   /protein_id="ACV85831.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSLSQVKALFGDLNPHLEKQRARKTDEARDYCMKEKTRVSGPFEF
FT                   GDYCPAGSHKRRQRESVIRSPVRMAEEDPSVFRRVKAKIAEEEFQKTAKEIQISNLKSW
FT                   QSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISVDRVHVIPCIPCGVCLKHHSGEIKCERIFGII"
XX
SQ   Sequence 1368 BP; 406 A; 259 C; 320 G; 383 T; 0 other;
     acccagcctc ggttccctct ccttggttcc ctcgtgcttt tcacgtgctc tctctcttct        60
     gtgttcttaa gcgaagatgc ctactattca gtcacaatgg tggtgtttta ctgtcttctt       120
     cctttctgcg accgctcccg acctggttcc tctcttcgag aacacccacg ttagttacgc       180
     ctgctggcag gaagaagagt cgccgacgac tcgacgacgc cacttgcagg gttacctgca       240
     attgaagggg aaaagaagtc tttcgcaggt taaggcactg ttcggagacc tgaaccccca       300
     cctggagaaa caacgtgcgc gtaagaccga cgaagctcgg gattactgta tgaaagagaa       360
     aactagggtt tccggtcctt ttgaatttgg ggattactgt cctgctggtt ctcacaaacg       420
     acgacaacga gaatctgtaa ttcgaagtcc ggtgagaatg gctgaggagg atccgtccgt       480
     cttccgacga gtcaaggcaa agattgctga ggaagaattc cagaagaccg ccaaggagat       540
     tcaaatttca aatttgaaat cttggcaatc gcgcctgaag acgctcctcg aacgggaccc       600
     agatgaccgc actatcttct gggtttacgg acctgatggt ggggaaggaa aatccacctt       660
     tgccagagac ctgtacagaa gtgggtcctg gttctataca cgtggaggat ctgcagataa       720
     tgtagcttac cagtacatag gatgtttagg gaataatatt gtatttgata ttcctcgtga       780
     taagaaggat tatctacagt acagtttaat agagatgttt aaggatagat taatagttag       840
     taataagtat gagcctctga tggctccctt aattaattgt atccatgtag ttgtgatgtc       900
     taattttctc ccagactttg agaagattag cgtagataga gtccatgtaa tcccatgtat       960
     tccttgtggt gtttgtctta agcatcatag tggtgaaata aaatgtgagc gaatatttgg      1020
     aataatctga aatgtttgcc gtataataga ttatattaaa gagagaaggg ccgcgcagcg      1080
     gcaataacat gagtaatttt gcttcttgaa aacaagaagg aatgaaatga aaaaaagaaa      1140
     taaaaaaaat tgtaatataa agatgtggga cccacattta tattgaaata aaaataaata      1200
     taaaaataac taaataaata tcactattca ttttgcggaa ggacataatt gtaaataatg      1260
     aaagttttgg gtaacgcggt gtaattttaa aagactttag ggtgtgcgct tgcaatttgc      1320
     cgggatccta ggatataaat aacacgtcac cgaggctggt gtagtatt                   1368
//