ID GQ478343; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC GQ478343; XX DT 01-AUG-2011 (Rel. 109, Created) DT 01-AUG-2011 (Rel. 109, Last updated, Version 1) XX DE Eclipta yellow vein virus clone EcYVV-[PK,Fai,06], complete genome. XX KW . XX OS Eclipta yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Khatri S.M., Nawaz-ul-Rehman M.S., Fauquet C.M.; RT "Eclipta yellow vein disease associated begomovirus"; RL Unpublished. XX RN [2] RP 1-2740 RA Khatri S.M., Nawaz-ul-Rehman M.S., Fauquet C.M.; RT ; RL Submitted (28-JUL-2009) to the INSDC. RL ILTAB, Danforth Plant Science Center, 975 N Warson Rd., St. Louis, MO RL 63132, USA XX DR MD5; 55799b1a679c7ba9c079b7a91a69d364. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Eclipta yellow vein virus" FT /segment="DNA-A" FT /host="Eclipta prostrata" FT /lab_host="Nicotiana benthamiana" FT /mol_type="genomic DNA" FT /country="Pakistan" FT /collected_by="Muhammad Shah Nawaz-ul-Rehman" FT /collection_date="06-Nov-2006" FT /clone="EcYVV-[PK,Fai,06]" FT /db_xref="taxon:875324" FT CDS 132..479 FT /codon_start=1 FT /product="V2" FT /note="pre-coat protein" FT /db_xref="GOA:G0T4T2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G0T4T2" FT /protein_id="ADM32421.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL FT ISILRSRNYVEASCRYRHFYPRVEGASSTELRQPLCNPCSCPHCPRHKVSHVGEQAHEP FT EAQNVQDVQKP" FT CDS 292..1062 FT /codon_start=1 FT /product="V1" FT /note="coat protein" FT /db_xref="GOA:G0T4T3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:G0T4T3" FT /protein_id="ADM32420.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1065..1469) FT /codon_start=1 FT /product="C3" FT /note="replication enhancer protein; REn" FT /db_xref="GOA:G0T4T4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G0T4T4" FT /protein_id="ADM32424.1" FT /translation="MDLRTGEPITAAQAWNGAYIWDVPNPLYFKILSHDNRPFTTNMDL FT IKIRIQFNYNLRRALGVHKCFLTFQIWTTLHPPTGLFLKVFKTQVLKYLNNLGVISINS FT IIRAVDHVLYNKIEQTMYVDMNSEIKFDLY" FT CDS complement(1162..1614) FT /codon_start=1 FT /product="C2" FT /note="transcriptional activator protein; TrAP" FT /db_xref="GOA:G0T4T5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G0T4T5" FT /protein_id="ADM32423.1" FT /translation="MRSSSPLRDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN FT CFNHGFTHRGTHHCSSSMEWRLYLGRSKSPIFQDPQPRQPAIHDQYGLNKDQNPIQLQP FT SESSGSAQMFSDLPNLDDLTPSDWSFLKGIQDPSPQVSQQSGCNLN" FT CDS complement(1511..2596) FT /codon_start=1 FT /product="C1" FT /note="replication protein" FT /db_xref="GOA:G0T4T6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G0T4T6" FT /protein_id="ADM32422.1" FT /translation="MPRAFKLNAKNYFLTYPDCSLTKEEALSQIKNLNTPTSIKYIKIC FT RELHQNGKPHLHMLIQFEGKYQCTNHRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYVEK FT DGDTLDWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEAIRIIKELAPKDYVLQFHNL FT NANLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENIVSAAARPLRPQSIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQS FT NTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFVTLEGPLYS FT GSNQSTAQGSEEAQQEEESRS" FT CDS complement(2143..2445) FT /codon_start=1 FT /product="C4" FT /note="movement associated protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G0T4T7" FT /protein_id="ADM32425.1" FT /translation="MGNLIYTCSSSSRESTSARITDSSTWSPQPGQHISIRTFRELNQA FT RTSSHTSRRTETPSTGESFRSMEDLQEGDNSQPMTLTPQHLTQAVSQRLLESLKN" XX SQ Sequence 2740 BP; 697 A; 572 C; 638 G; 833 T; 0 other; accggatggc cgcgcgattt ttttgtgggt ccctccacta actcttgtct gccaatcata 60 tgacgcgctg aaagcttaaa taattatccc gcctattata agtacttcgt cgctaagtta 120 tagtttgaaa aatgtgggat ccactgttaa acgagttccc tgagactgtt cacgggtttc 180 gttgcatgct tgcgattaaa tatcttcaac aactgtctga agaatactca cctgatacgg 240 taggttacga tctaattcgc gatttaattt ctattttacg ttccaggaat tatgtcgaag 300 cgtcctgccg atatcgtcat ttctaccccc gcgtcgaagg tgcgtcgtcg actgaacttc 360 gacagcccct atgcaacccg tgcagttgtc cccactgtcc gcgtcacaaa gtctcgcatg 420 tgggcgaaca ggcccatgaa ccggaagccc agaatgtaca ggatgtacag aagccctgat 480 gttccaagag gctgtgaggg tccgtgtaag gtccaatcct ttgagtccag acacgatgta 540 gtccatatag gtaaggtcat gtgtattagt gatgttactc gcggtactgg gctgacccat 600 agagttggga aacgtttctg tgttaaatca gtctatgtat tgggtaagat ctggatggat 660 gaaaacataa agtccaaaaa ccacactaac aatgtgatgt tcttcttggt ccgtgatcga 720 cggcctgtgg ataagcctca ggattttgga gaggtcttca acatgtttga caacgagccc 780 agcaccgcta ctgtcaagaa tgttcatcga gatcgctacc aggtgttgag gaaatggtat 840 gcaacagtta cgggtggtca atatggagct aaggaacagg ccttggtcaa gaagtttgtc 900 cgagttaaca attatgttgt ttacaatcag caagaggcag ggaaatatga gaatcattct 960 gagaatgccc tgatgttgta tatggcatgt actcatgcct ctaatccagt ttacgccact 1020 cttaagatta ggatctactt ctacgattct gtaaccaatt gatattaata aagatcgaat 1080 tttatttctg aattcatgtc tacgtacata gtttgttcta ttttattgta caatacatga 1140 tctactgctc taataatcga attaattgag attacaccca gattgttgag atacttgagg 1200 acttgggtct tgaatacctt taagaaaaga ccagtcggag ggtgtaaggt cgtccagatt 1260 tggaaggtca gaaaacattt gtgcactccc agagctctcc gaaggttgta gttgaattgg 1320 attctgatct ttattaagtc catattggtc gtgaatggcc ggttgtcgtg gctgaggatc 1380 ttgaaatata ggggatttgg aacgtcccag atataggcgc cattccatgc ttgagctgca 1440 gtgatgggtt cccctgtgcg taaatccatg gttgaagcag ttaatagata aataataaga 1500 acacccgcat tcaagatcta ctctcctcct cctgttgcgc ctcttcgctt ccctgtgctg 1560 tactttgatt ggaacctgag tacagtggtc cctcaagggt gacgaagatc gcattcttca 1620 ctgcccagtt ctttagtgcg gtgttctttt cctcatctag gaattcttta taactgctgt 1680 tgggaccagg attgcagagg aagattgttg gtattccgcc tttaatttga actggcttcc 1740 cgtactttgt gttggattgc cagtcccttt gggcccccat gaattcttta aagtgcttga 1800 ggaagtgcgg atctacgtca tcaatgacgt tataccaagc gtcgttactg tacacctttg 1860 ggcttagatc taaatgccca cataaatagt tatgtgggcc taaagaccta gcccacattg 1920 tcttcccagt acgactgtca ccctcaatca ctatactttg aggtctcaag ggccgcgcag 1980 cggcactgac gatgttctcg gcagcccact cttcaagttc ttctggaact tgatcaaagg 2040 aagaggaaga aaaaggagag acataaacct ccattggagg tgtaaaaatc ctatctaaat 2100 tagcatttaa attatgaaat tgtagtacat aatcttttgg tgctaattct ttaatgattc 2160 taatagcctc tgacttactg cctgcgttaa gtgctgcggc gtaagcgtca ttggctgact 2220 gttgtccccc tcttgcagat cttccatcga tctgaaactc tccccagtcg agggtgtctc 2280 cgtccttctc gacgtatgac ttgacgtccg agcttgattt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt ggggagacca agtcgaagaa tcggtgattc gtgcactggt 2400 actttccctc gaactggatg agcatgtgta gatgaggttt cccattttga tgaagctctc 2460 tgcagatctt gatatatttt attgaagttg gggtatttag gtttttgatt tgggaaagtg 2520 cttcctcttt tgttagagag cagtcgggat aagtgaggaa gtagtttttg gcgtttaatt 2580 taaaggcacg tggcattttg gcaatcggtg tacactctaa ttctctggta atcggtgtaa 2640 tggggtacaa tatataggtg tacaccaaat ggcattattg taatttggga aagtaattca 2700 aaatcctcac gctccaaaaa gcggccatcc gtctaatatt 2740 //