ID GQ477135; SV 1; circular; genomic DNA; STD; VRL; 2763 BP. XX AC GQ477135; XX DT 24-SEP-2009 (Rel. 102, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 3) XX DE Honeysuckle yellow vein virus, complete genome. XX KW . XX OS Honeysuckle yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2763 RX DOI; 10.1007/s00705-011-0916-0. RX PUBMED; 21279729. RA Lee G., Kim S., Jung J., Auh C.K., Choi E., Chang M., Lee S.; RT "Agroinoculation of Nicotiana benthamiana with cloned honeysuckle yellow RT vein virus isolated from Lonicera japonica"; RL Arch. Virol. 156(5):785-791(2011). XX RN [2] RP 1-2763 RA Lee G., Choi E., Chang M., Lee S.; RT "Molecular Characterization and Establishment for Infectious Clone of RT Honeysuckle yellow vein virus Korean Isolate"; RL Unpublished. XX RN [3] RP 1-2763 RA Lee G., Choi E., Chang M., Lee S.; RT ; RL Submitted (13-AUG-2009) to the INSDC. RL Genetic Engineering, SungKyunKwan Univ., 300 Chunchundong Jangangu, Suwon RL 440-746, South Korea XX DR MD5; b4c02c2ffe37c09cd3af087b399595ac. XX FH Key Location/Qualifiers FH FT source 1..2763 FT /organism="Honeysuckle yellow vein virus" FT /host="Lonicera japonica" FT /mol_type="genomic DNA" FT /country="South Korea:Daegu" FT /collection_date="Oct-2005" FT /db_xref="taxon:240865" FT gene 138..488 FT /gene="AV2" FT CDS 138..488 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:C9E9V5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C9E9V5" FT /protein_id="ACV87535.1" FT /translation="MWDPLVNDFPETVHGFRCMLAVKYLLLVESTYAPDTVGYDLVRDL FT IGVVRAKNYVEASCRYRNFHTRLQGTAPSELRQPVCQPCECPHCPRHKQKEIMGSAAHV FT SEAQDVQNVQKS" FT gene 298..1071 FT /gene="AV1" FT CDS 298..1071 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /db_xref="GOA:C9E9V6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C9E9V6" FT /protein_id="ACV87534.1" FT /translation="MSKRPADIGIFTPVSKVRRRLNFDSPYVSRASAPIALVTNKRRSW FT AQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEKKNDVGHSGTLLCVSDITRGSGLTH FT RVGKRFCIKSVYIIGKIWMDDNIKTKNHTNNVLFWLVRDRRPGSTPYVFQEAFNMFENE FT PSTATIKQELRDRLQVLHRFSATVTGGQYASKEQAVIKRFWKLNHHVTYNHQEQAKYEN FT HTENALLLYMACTHASSPVYATLKIRVYFYDSVQN" FT gene complement(1068..1472) FT /gene="AC3" FT CDS complement(1068..1472) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:C9E9V7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C9E9V7" FT /protein_id="ACV87538.1" FT /translation="MDSRTGDTITAAQARNGAYTWTVPNPLYFKITTHAQRPFNMDQDI FT ITLQIQFNHNLRNQLHIHKCFLSFKIWTRLHPQTLHFLRVFRTQVLKYLDNLGVISINN FT VIRAVDHVLYNVFEGTEYVQQFTDIKFKLY" FT gene complement(1213..1620) FT /gene="AC2" FT CDS complement(1213..1620) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:C1KDZ2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C1KDZ2" FT /protein_id="ACV87537.1" FT /translation="MQPSSPSTAHSTQVPIKVRHRSEKRRAPRRRRIDLNCGCSIYVAL FT GCANHGFTHRGHHHCSSGKEWRVYLDSAQSPIFQNHDTRATAIQHGSGYNNFTDTIQPQ FT PQESTAHTQVLPLFQDLDSLTSSDFAFLEGI" FT gene complement(1520..2611) FT /gene="AC1" FT CDS complement(1520..2611) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:C9E9V9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C9E9V9" FT /protein_id="ACV87536.1" FT /translation="MPRAGRFSLKAKNYFLTYPQCSIDKGEALTQLQKLNTPTNIKFIR FT ICRELHQNGSPHLHVLIQFEGKYNCTNQRFFDLVSPNRSAHFHPNIQGAKSSSDVKTYM FT EKDGDIVDFGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALCILREKAPKDFVLQFH FT NLNSNLDRIFAPPLEEFVSPFLSSSFDQVPEQLEEWAAENVRDSAARPWRPISIVIEGD FT SRTGKTMWARSLSPRHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAIKNATFVTLYGP FT LYSGTHQGATQIREEESTSPEED" FT gene complement(2161..2454) FT /gene="AC4" FT CDS complement(2161..2454) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C9E9W0" FT /protein_id="ACV87539.1" FT /translation="MGALISMSSSSSRGNTTAQINDSSTSYPQTGQHISIQTFRELKAR FT QMSRPIWRKTETSLILECSRSMEDQLEEVASLPTTRMPRQSTQDLSHRHSVY" XX SQ Sequence 2763 BP; 714 A; 557 C; 654 G; 838 T; 0 other; accggatggc cgcccgaaat ttcgtggtgg tccccccctt gtcggccaat gaataacgtg 60 ccttgaatgt tagataagtg gaaagtgacg tttgcttttg tctttatata cgtcagccct 120 aattttaacg gtgtaagatg tgggatcctt tagttaacga tttccctgaa accgttcacg 180 gttttaggtg tatgttagcg gttaagtacc tcctacttgt tgaatctacg tatgctccag 240 atactgttgg gtacgatctt gtacgcgatc taattggagt tgttcgagct aagaactatg 300 tcgaagcgtc ctgcagatat aggaattttc acacccgtct ccaaggtacg gcgccgtctg 360 aacttcgaca gcccgtatgt cagccgtgcg agtgccccca ttgccctcgt cacaaacaaa 420 aggagatcat gggctcagcg gcccatgtat cggaagccca ggatgtacag aatgtacaga 480 agtcctgatg ttcccaaggg gtgtgaaggc ccatgtaagg tccagtcatt tgagaagaag 540 aatgatgttg ggcattctgg tactctgctc tgtgtttctg atatcactcg tggtagtgga 600 cttactcatc gtgttgggaa gagattttgt ataaaatctg tttatattat tggtaaaatc 660 tggatggatg ataatattaa gacgaagaat cacactaaca acgtgttatt ctggttagtt 720 agggatagac gtcctggttc aactccttat gtattccaag aggcattcaa tatgtttgaa 780 aatgaaccca gtacagccac tattaaacag gagttgagag atcgtttgca ggtgttacat 840 agattcagtg cgactgttac aggtggacaa tatgcgtcca aggaacaagc tgtcatcaag 900 aggttctgga agttgaatca tcatgtcact tacaatcatc aggagcaagc taaatatgag 960 aaccatactg aaaatgcttt gttattgtat atggcgtgta ctcatgccag tagtccagtg 1020 tatgccacat taaaaatcag agtgtatttc tacgattcag tacaaaatta ataaagctta 1080 aattttatat ctgtaaattg ttgtacatat tcagttcctt cgaatacatt atacaataca 1140 tgatctactg ctctaattac attgttaatt gatattacac ccaaattatc taagtacttc 1200 aacacttgag tcctaaatac cctcaagaaa tgcaaagtct gaggatgtaa gcgagtccaa 1260 atcttgaaag agaggaagca cttgtgtatg tgcagttgat tcctgaggtt gtggttgaat 1320 tgtatctgta aagttattat atcctgatcc atgttgaatg gccgttgcgc gtgtgtcgtg 1380 attttgaaat ataggggatt gggcactgtc caggtatacg cgccattcct tgcctgagct 1440 gcagtgatgg tgtcccctgt gcgtgaatcc atgatttgca caccccaatg cgacgtaaat 1500 agaacacccg cagttcagat caatcctcct ccggcgaggt gctctcctct tctctgatct 1560 gtgtcgcacc ttgatgggta cctgagtaga gtgggccgta gagggtgacg aaggttgcat 1620 ttttaattgc ccaggctttt agggcagcat tcttgtcctc gtctaaatac tcggtgtatg 1680 atgacgttgg gcctggattg cagaggaaga ttgttgggat acctccttta atttgaattg 1740 gtttcccgta cttggtgttg ctttgccagt ccctttgggc ccccatgaac tctttaaagt 1800 gctttagata gtggggatcc acgtcatcaa tgacgttgta ccaggcctca ttgctgtaaa 1860 ccttggggct taagtcaaga tggccgcaaa ggtagttatg acgtggactc agagacctgg 1920 cccacatggt cttccctgtc ctgctatcac cttctatcac aatgctaatg ggcctccatg 1980 gccgcgcagc ggaatccctg acgttctcgg cagcccattc ctcaagttgc tctggaactt 2040 gatcaaatga agaagataaa aaaggagaaa caaattcctc caacggagga gcaaaaatcc 2100 tatctaaatt gctatttaaa ttatgaaatt gtaaaacaaa atctttggga gctttctccc 2160 ttaatataca gagtgccgat gacttagatc ctgagttgat tgcctcggca tacgcgtcgt 2220 tggcagactg gcaacctcct ctagctgatc ttccatcgac ctggaacact ccaaaatcaa 2280 cgatgtctcc gtctttctcc atataggtct tgacatctga cgagctttta gctccctgaa 2340 tgtttggatg gaaatgtgct gacctgtttg gggatacgag gtcgaagaat cgttgatttg 2400 tgcagttgta tttcccctcg aactggatga ggacatggag atgagggctc ccattttgat 2460 gtagctctct gcagatcctt atgaatttaa tgttagttgg tgtgtttaat ttttgtaatt 2520 gggttagggc ttcacctttg tcgatggagc attgtgggta tgtgaggaaa taatttttgg 2580 cttttaaaga gaaacgccca gctctaggca tgttgacttg gtcaattggg gggcacttca 2640 aactcctgct gaatgggggg gcattggggg gcaatttata ttctgggggg catggcatta 2700 ttgtaattac tttaatttta aattcaagat tcaaattggt aaagcggcca tccgtataat 2760 att 2763 //