ID   GQ475389; SV 1; linear; genomic RNA; STD; VRL; 771 BP.
XX
AC   GQ475389;
XX
DT   13-SEP-2010 (Rel. 106, Created)
DT   15-FEB-2013 (Rel. 115, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus isolate 557-OYDV2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-771
RA   Parrano L., Afunian M., Pagliaccia D., Douhan G., Vidalakis G.;
RT   "Characterization of viruses associated with garlic plants propagated from
RT   different reproductive tissues from Italy and other geographic regions";
RL   Phytopathol. Mediterr. 51(3):549-565(2012).
XX
RN   [2]
RP   1-771
RA   Afunian M.R., Parrano L., Pagliaccia D., Vidalakis G.;
RT   ;
RL   Submitted (13-AUG-2009) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, 900 University
RL   Ave, Riverside, CA 92521, USA
XX
DR   MD5; 8f2413d0d936b86894c149c4967ddf30.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..771
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum (garlic)"
FT                   /isolate="557-OYDV2"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2008"
FT                   /PCR_primers="fwd_seq: gcgggggaaggagaagatgcag, rev_seq:
FT                   aaccgtatcgttcgccacaactag"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..>771
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:E0X553"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E0X553"
FT                   /protein_id="ADM89581.1"
FT                   /translation="AGEGEDAAAQSSTTKQIVRQKDKDVDAGTTGKFAVPRIKVLSDKM
FT                   RFPKVGKKVVLNAEHLLAYKPEQIELYNTRSTQQQFETWYMAIKKEYDVDDEQMKIILD
FT                   GLMVWCIENGTSPNLTGNWTMMDGDEQVEYPLAPILDNAKPTFRQIMAHFSDAAEAYIE
FT                   YRNATEKYMPRYGLQRNLTEFSLARYAFDFYEMTSKTPKRAKEAHMQMKAAAVRGATNR
FT                   LFGLDGNVNTTEEDTERHTAADINKNQHTLLGIKM"
XX
SQ   Sequence 771 BP; 275 A; 143 C; 189 G; 164 T; 0 other;
     gcgggggaag gagaagatgc agcagcgcaa tcaagtacga cgaaacaaat tgtgaggcaa        60
     aaggataaag atgttgatgc tggaaccact ggtaagtttg cagtacccag gattaaagtg       120
     ctgtcagaca aaatgcgatt tccaaaggtt ggcaagaaag ttgtactaaa cgcagagcat       180
     ttattagcat acaaacctga acaaattgaa ttgtacaaca cgaggtcgac gcaacaacag       240
     ttcgagactt ggtatatggc aatcaagaaa gaatacgacg tggatgacga acaaatgaaa       300
     atcatattag atggtttaat ggtttggtgc attgagaatg ggacttcccc aaacctaaca       360
     ggaaattgga ctatgatgga tggtgatgag caagtcgaat atccattggc accaattttg       420
     gataatgcga aaccgacttt tagacaaata atggcgcatt tcagtgatgc agctgaagca       480
     tatattgaat atcgaaacgc cacagaaaaa tacatgcccc ggtatggact tcagcgaaac       540
     ctaacagaat tcagtttagc acgttacgca ttcgactttt atgagatgac ttcaaagact       600
     cccaagcgag ccaaggaagc acacatgcaa atgaaggcgg cagcggttag aggggcaact       660
     aaccgtttgt ttggcctgga tggtaacgta aacacaacag aagaggacac ggaaaggcac       720
     actgcagcag acataaacaa gaaccaacac acgttgcttg gtattaagat g                771
//