ID   GQ475386; SV 1; linear; genomic RNA; STD; VRL; 771 BP.
XX
AC   GQ475386;
XX
DT   13-SEP-2010 (Rel. 106, Created)
DT   15-FEB-2013 (Rel. 115, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus isolate 565-OYDV5 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-771
RA   Parrano L., Afunian M., Pagliaccia D., Douhan G., Vidalakis G.;
RT   "Characterization of viruses associated with garlic plants propagated from
RT   different reproductive tissues from Italy and other geographic regions";
RL   Phytopathol. Mediterr. 51(3):549-565(2012).
XX
RN   [2]
RP   1-771
RA   Afunian M.R., Parrano L., Pagliaccia D., Vidalakis G.;
RT   ;
RL   Submitted (13-AUG-2009) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, 900 University
RL   Ave, Riverside, CA 92521, USA
XX
DR   MD5; 4bec657e063893b435f5d937e8f531a0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..771
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum (garlic)"
FT                   /isolate="565-OYDV5"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /collection_date="2008"
FT                   /PCR_primers="fwd_seq: gcgggggaaggagaagatgcag, rev_seq:
FT                   aaccgtatcgttcgccacaactag"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..>771
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:E0X551"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E0X551"
FT                   /protein_id="ADM89579.1"
FT                   /translation="AGEGEDAAAQSSTSRQVTKQKDKDVDTGTTGKFAVPRIKALSDKM
FT                   RFPKVGKTVVLNAEHLLAYKPDQIELYNTRATKSQFENWYNAVKKEYDVDDEQMKILLN
FT                   GLMVWCIENGTSPNLSGNWTMMDGEEQVEYPLAPVLDNAKPTFRQIMAHFSDAAEAYIE
FT                   YRNATEKYMPRYGLQRNITELSLARYAFDFYEMTSKTPKRAKEAHMQMKAAAIRGATNR
FT                   LFGLDGNVNTTEEDTERHTAADVNKNQHTLLGIRM"
XX
SQ   Sequence 771 BP; 275 A; 141 C; 182 G; 173 T; 0 other;
     gcgggggaag gagaagatgc agcagcacaa tcaagcactt cgaggcaagt cacaaagcaa        60
     aaagataaag atgttgatac tggcacaacc ggtaaatttg cagttcctag aattaaggct       120
     ttatctgaca agatgaggtt tccaaaggtt ggtaaaaccg ttgtacttaa cgcagaacac       180
     ctgttagctt ataaaccaga tcaaatcgag ctgtataaca cgagagcaac gaagagtcaa       240
     tttgaaaact ggtataatgc tgtaaagaaa gagtacgacg tcgatgatga gcaaatgaaa       300
     attttactaa acggtttgat ggtttggtgc attgagaatg gaacatcacc taatctatca       360
     ggaaactgga ccatgatgga tggcgaagag caagttgaat atccgttagc accagttctc       420
     gataatgcaa aaccaacctt cagacaaata atggcacatt tcagtgatgc agctgaagca       480
     tacattgaat atagaaatgc cacagaaaaa tacatgcccc ggtatggact tcagcgcaac       540
     ataacagaac ttagtttggc acgttacgca ttcgattttt acgagatgac ttctaaaact       600
     cctaaacgag cgaaagaagc acatatgcaa atgaaggcag cagcgattag aggggcaact       660
     aatcgtttgt ttggcctgga tggtaacgta aacacaacgg aagaggacac ggaaagacat       720
     acggctgcgg atgttaataa gaaccagcac acgttgcttg gtattaggat g                771
//