ID   GQ472845; SV 1; linear; genomic RNA; STD; VRL; 1798 BP.
XX
AC   GQ472845;
XX
DT   31-DEC-2012 (Rel. 115, Created)
DT   31-DEC-2012 (Rel. 115, Last updated, Version 1)
XX
DE   Southern rice black-streaked dwarf virus isolate Jni4 segment S10, complete
DE   sequence.
XX
KW   .
XX
OS   Southern rice black-streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1798
RA   Zhu Q., Yin X., Li X.;
RT   "Southern rice black-streaked dwarf virus isolate Jni4 segment S10";
RL   Unpublished.
XX
RN   [2]
RP   1-1798
RA   Zhu Q., Yin X., Li X.;
RT   ;
RL   Submitted (11-AUG-2009) to the INSDC.
RL   Dept. of Plant Pathology, College of Plant Protection, Shandong
RL   Agricultural University, Tai'an, Shandong 271018, China
XX
DR   MD5; b0f886cde3250c5af9547e835ca4a29b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1798
FT                   /organism="Southern rice black-streaked dwarf virus"
FT                   /segment="S10"
FT                   /host="maize"
FT                   /isolate="Jni4"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Ji'ning, Shandong"
FT                   /db_xref="taxon:519497"
FT   5'UTR           1..21
FT   CDS             22..1695
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:K9JAJ2"
FT                   /protein_id="ADG59722.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNSLFHE
FT                   SNIVKSPHIASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKEHIQSYFRNEHQ
FT                   PIFQTLTNNNPSDEFLGVTTFGLSLFATSKLDAEQIERVQIETLTEGNVTLKPFSADGL
FT                   EVILDDSYIGIIGKISGLEVHKLLDKCCREVPAQMGILTDEVKLLIRSGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQYSRQMFEKLNLFFNISLSIIPVSALKTIHVFEKELSALDADK
FT                   SLLEQTWSGVSSFIETWKVKTKAKDEDQDEYELAGLSALRKGVDGNSVSSPYNDKKFIE
FT                   WYSKTFAKIEKGSSLRKTEIEDKNTSGTSNITKQVKIHFPVQYFDEVKSNGHEKSVTVI
FT                   TNKGEMSLESYRKIGEILSAIWKRGKALAAPCIDYIKLGVEKAYHLAPVIMKKYNLTID
FT                   DIIHFIEIGPSYLAKLDKIDDWSLIAKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKADRDRLIKKATTANSSTSNSNSEHGQKIVLNKVTR"
FT   3'UTR           1696..1798
XX
SQ   Sequence 1798 BP; 614 A; 327 C; 317 G; 540 T; 0 other;
     aagttttttt cctcacccat aatggctgac ataagacttg acatagcgcc cgatcttatc        60
     cataatggtg tgcctcaaag actttcagat acgataattc taaacaaccg accaacaatc       120
     acacttctgt ctcacttcaa ctctcttttt cacgaatcaa atattgttaa atcaccccac       180
     atcgcgtcat ctcaaactac agttaattta tacattcgta agcatttact gactcgactt       240
     catgatagat tacaaactgt cgaaaccagt actctaccga acattactca acttaaagaa       300
     catattcaaa gttatttccg caatgaacat caacctattt ttcaaaccct gactaacaat       360
     aatcctagtg atgaattttt aggtgtaact acttttggtt taagtttatt cgcaacttcg       420
     aagttggatg cagaacaaat agaacgagta caaattgaga ccctaactga aggaaacgtt       480
     acacttaaac cattctccgc tgacggttta gaagtaattt tagatgatag ctacatcgga       540
     ataattggaa aaatttctgg tttagaagta cataaattgc ttgataaatg ttgtcgtgaa       600
     gttcctgctc aaatgggaat attaactgac gaagttaaac ttttaatacg ttccggaaaa       660
     ttaagaattg acggtggata cgatttcaat tgtcctgcta gtacaacaga cgtgacacac       720
     tatggcggtt acgaccaata ttcgagacaa atgtttgaaa aattgaattt gttctttaac       780
     atcagtttga gcattattcc tgtttctgca cttaaaacta ttcatgtatt tgagaaagaa       840
     ctaagcgctt tagatgctga caaatcactt ttagaacaaa catggagcgg agtctcctca       900
     tttattgaaa cctggaaagt aaaaactaaa gctaaagatg aagatcaaga tgagtacgaa       960
     ctagctggac tgtccgcact tagaaaagga gtcgatggca attctgtatc tagcccttac      1020
     aatgataaga agttcatcga atggtattcc aagacgtttg ctaaaataga gaaaggttca      1080
     tcgttgcgta agaccgaaat tgaagacaaa aatacatccg gcacctcaaa cataacaaag      1140
     caagttaaaa ttcattttcc tgttcagtat ttcgatgaag tcaaatctaa cggtcatgaa      1200
     aaaagtgtta ctgtaatcac taataaaggt gaaatgtcat tggaatctta ccgaaagata      1260
     ggtgaaatat taagtgcgat ctggaaacgt ggtaaggcat tagctgctcc ctgcatcgat      1320
     tacatcaaac ttggcgtcga aaaagcttat catttagctc ctgtaatcat gaagaaatat      1380
     aatttaacta ttgatgatat aattcatttt attgaaattg gtccttcata cttagcgaaa      1440
     ttggataaaa ttgatgattg gtccttaatt gcaaaattga ttattaccag tgttttgcca      1500
     aatatcattc aagcggtgta taaaacagat cctagcaata atgttatgaa ttcagttatt      1560
     attagcagag ccaacaattt attgaaggcg gatcgcgatc gtctaattaa gaaagctacc      1620
     actgcaaatt catctaccag taattcaaat tcagaacatg gtcaaaagat tgtgttaaat      1680
     aaagtcacca gatgataatt gaggtttcat cattagcgcg actagttcag tgctgtgtgg      1740
     tcttcagttc attatcgacg ccgagtgacg acggctaggg ggaaattcag ctattgtc        1798
//