ID GQ415387; SV 1; circular; genomic DNA; STD; VRL; 2705 BP. XX AC GQ415387; XX DT 23-DEC-2009 (Rel. 103, Created) DT 23-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Panicum streak virus isolate A_MZ_Nac1, complete genome. XX KW . XX OS Panicum streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RC Publication Status: Online-Only RP 1-2705 RX PUBMED; 19903330. RA Varsani A., Monjane A.L., Donaldson L., Oluwafemi S., Zinga I., Komba E.K., RA Plakoutene D., Mandakombo N., Mboukoulida J., Semballa S., Briddon R.W., RA Markham P.G., Lett J.M., Lefeuvre P., Rybicki E.P., Martin D.P.; RT "Comparative analysis of Panicum streak virus and Maize streak virus RT diversity, recombination patterns and phylogeography"; RL Virol J 6:194-194(2009). XX RN [2] RP 1-2705 RA Varsani A., Monjane A.L., Donaldson L., Oluwafemi S., Zinga I., Komba E.K., RA Plakoutene D., Mandakombo N., Mboukoulida J., Semballa S., Briddon R.W., RA Markham P.G., Lett J.-M., Lefeuvre P., Rybicki E.P., Shepherd D.N., RA Martin D.P.; RT ; RL Submitted (25-JUL-2009) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Rondebosch, Cape Town, RL WP 7701, South Africa XX DR MD5; 6210f8383c5cc961cacd623f6474ddb2. DR EuropePMC; PMC2777162; 19903330. XX FH Key Location/Qualifiers FH FT source 1..2705 FT /organism="Panicum streak virus" FT /host="panicum maximum" FT /isolate="A_MZ_Nac1" FT /mol_type="genomic DNA" FT /country="Mozambique" FT /lat_lon="25.99 S 32.02 E" FT /collection_date="2009" FT /db_xref="taxon:10826" FT CDS 153..476 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:D2IW05" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:D2IW05" FT /protein_id="ADA67939.1" FT /translation="MYASSTTPFPFPQPPRVPSAAPVAGGLPWSRVGEIVIFTFVSVLG FT LYLLWLWVLKDCILLLKAQRGRSTEELIFGPGERPAVASADGSRSVPDPSPSCPPGPRP FT FVV" FT CDS 487..1230 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:D2IW06" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:D2IW06" FT /protein_id="ADA67940.1" FT /translation="MSGALKRKRSDEVAWSRRKPVKKQARVPPPRAGPSVRRGLPALQI FT QTLTAAGDTMITVPSGGICSLIGTYARGSDEGNRHTNETLTYKVALDYHFVATAAACRY FT SSIGVGVMWLVYDAQPTGNSPEVKDIFPHSDTLSAFPYTWKVGREVCHRFVVKRRWCFT FT METNGRIGSDVPPANTAWPPCKKDLYFHKFCTGLGVKTEWKNVTDGKVGAIKKGALYIV FT IAPGNGLEFTVHGQCRLYFKSVGNQ" FT CDS complement(1595..2569) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:D2IW07" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2IW07" FT /protein_id="ADA67941.1" FT /translation="MSTSLSITSDGRHSVRSFRHRNANTFLTYSKCPLEPEFIGEHLFR FT LTKDFEPAYILVVRETHQDGTWHCHALLQCIKPVTTRDERYFDIDRYHPNIQSAKSTDK FT VREYILKDPKDKWEKGTYIPRKKSFVPPGKENSEKKPSKDEVMKEIMTHATSRAEYLSL FT VQTSLPYDWATKLSYFEYSASRLFPDIAEPYSNPHPATDPDLLCNETLQDWLEPNIYQV FT SPKAYMLLEPSCLSLEQAKADLEWLSETTRLLQEQESAASTSSAQHGQVKHPGPEASDD FT TTTGRIISTGLHTMKKLSTMSLTTFPSSSVRAGSSSSAVKRTT" XX SQ Sequence 2705 BP; 556 A; 718 C; 728 G; 703 T; 0 other; taatattacc gctcacaccc catgcgagcc gcggctctgt gcggcgagcg gtccccggat 60 gttcttaccc cggtgcgatt tctttagctg cgtcttcttt agcagctgcc cccaccgtcc 120 tataagttgc tcccccggtg cgattccgca tcatgtatgc tagcagcacc actccttttc 180 ctttccctca gccgcctcgg gtaccctctg cagctccggt cgccggaggc ctgccgtgga 240 gtcgcgtcgg tgagatagtt atctttacct ttgtttcagt gctaggcctt tacctgcttt 300 ggctttgggt gctcaaagat tgtatcttac ttctgaaggc tcagcgaggt agatccacgg 360 aggagctgat ctttggtcct ggtgagaggc cagccgtcgc ttctgccgac ggttctcgct 420 ccgttccaga tccgtctccg tcctgtccgc cgggacctag acctttcgtg gtctagagca 480 ctcagcatgt ccggagcttt gaagcgcaag cgttcggatg aggttgcctg gagtcgaagg 540 aagcccgtca agaagcaagc ccgggttccc cctccccggg ctggcccctc tgtcaggaga 600 ggactccctg cccttcagat ccagacgctt acggcggctg gtgacactat gatcacggtg 660 ccgtccggcg gcatctgcag tctgattggc acgtatgccc ggggctctga tgaaggtaac 720 cgccacacca acgagactct gacgtacaag gttgcgctgg actaccactt cgttgctact 780 gctgcggcct gccgttactc cagcattgga gtgggtgtca tgtggttggt gtatgatgcg 840 cagccgaccg gcaattcacc ggaggtgaag gacatcttcc ctcactccga cacgctctca 900 gcgttcccct acacttggaa ggttggcagg gaggtgtgcc atcgcttcgt tgttaaacgg 960 cgctggtgct ttaccatgga gactaacggc cggatcggtt cagacgttcc tccggccaat 1020 accgcttggc cgccttgcaa gaaggacctc tacttccaca agttctgcac gggactcggc 1080 gtgaagacgg agtggaagaa cgtgacagac gggaaggtcg gcgctattaa gaagggcgcc 1140 ttgtacatag tcattgcgcc tggaaacggg cttgagttta cggttcacgg ccagtgccgt 1200 ctgtacttca agtcagttgg taatcagtga ttaccacatc aattaataaa acaagtttta 1260 ttcaaagagc gaagctcata cattacatag tcagcagata tgctgacaga aaacacacac 1320 atagtgcagc ctcgggctaa agaccgagtc tcaaacgacc caacttaaaa acaaatcaaa 1380 acaagcatga tattattaaa tatgcagccg ccggcttaag caggagtgaa ccatttctct 1440 cctgcctgca ttacgtagat ttcgcagttt gcgtagaagt agtcatactg cgccggagtc 1500 atgtccttca gccagtcctc atcctcgttg gcgaggatga tagttggtat gctctttgag 1560 gccaccttcc gtctcttccc gtacttcggg ttcactatgt agtccttttg acagccgacg 1620 agctgcttcc agcacggaca gaacttgaag ggaatgtcgt caacgacatt gtagacagct 1680 tcttcatcgt atgaagacca gtcgatatta ttctgccagt agttgtgtcg tccgaggctt 1740 ctggcccagg atgttttacc tgtccgtgtt gggccgacga tgtagaggct gcgctttctt 1800 gctcctggag taatctggtt gtttcagaca accattctaa gtcagctttg gcttgctcta 1860 ggcttaagca gctaggttca aggagcatgt atgctttagg actgacctgg tagatgttag 1920 gctcaagcca gtcctggagt gtttcgttgc agaggaggtc aggatcagtg gcaggatgag 1980 gattgctgta aggctctgca atgtccggga acaggcgact agctgagtac tcaaagtatg 2040 acagttttgt ggcccagtcg taaggcagtg aagtctgcac tagtgaaagg tactctgctc 2100 tgctagtggc atgtgtcatg atctccttca tgacctcatc cttagaaggc ttcttctcag 2160 aattttcctt acctggaggt acgaagctct tcttccttgg tatgtaagta cctttctccc 2220 acttgtcctt gggatccttc agtatgtact cacgtacctt gtcagtgctc ttggcgctct 2280 gtatattcgg atgataccga tctatgtcaa agtatctctc gtcacgagta gtgacaggct 2340 tgatgcactg gagaagagca tggcagtgcc atgttccatc ttggtgagtc tctctcacta 2400 ccaggatgta tgctggctca aagtccttag tgagcctgaa gagatgctca ccgatgaact 2460 ctggttctag tggacacttg ctgtatgtga ggaaggtgtt cgcgttccgg tgcctgaagg 2520 accggacgct gtgcctgcca tcagaggtga ttgacagaga ggtcgacatt agcgcaggag 2580 gctgggcaat ctcaggctct cctcagctct atccctagac agctgcgaaa taatccgccc 2640 accccccgtg ccttttatag ctgcttggtg ggctgggccg gccggcccat ggggtgtgag 2700 cagca 2705 //