Dbfetch
ID GQ397254; SV 2; linear; genomic RNA; STD; VRL; 3257 BP. XX AC GQ397254; HM566111; XX DT 09-SEP-2009 (Rel. 102, Created) DT 09-JUN-2011 (Rel. 109, Last updated, Version 3) XX DE Melon yellow spot virus isolate Sanya non-structural protein (NSs) and DE nucleoprotein (N) genes, complete cds. XX KW . XX OS Melon yellow spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RP 1-3257 RA Gu Q.S., Wu H.J., Zhang X.J., Wu M.Z., Wang D.M., Peng B., Kong X.Y., RA Liu T.J.; RT "First report of Melon yellow spot virus in mainland China"; RL Unpublished. XX RN [2] RP 1-3257 RA Gu Q.S., Wu H.J., Peng B.; RT ; RL Submitted (19-JUL-2009) to the INSDC. RL Biotechnology Center, Zhengzhou Fruit Research Institute, CAAS, Hanghai RL Donglu, Zhengzhou, Henan 450009, P.R. China XX RN [3] RC Sequence update by submitter RP 1-3257 RA Gu Q., Chen H., Wu H.; RT ; RL Submitted (16-MAR-2011) to the INSDC. RL Biotechnology Center for Fruits and Cucurbits, Zhengzhou Fruit Research RL Institute, Chinese Academy of Agricultural Sciences, East Hanghai Road, RL Zhengzhou, Henan 450009, China XX DR MD5; 478bec6a9beaabeb34b25d9940f184e6. XX CC On Jun 8, 2011 this sequence version replaced gi:257043507. XX FH Key Location/Qualifiers FH FT source 1..3257 FT /organism="Melon yellow spot virus" FT /host="melon" FT /isolate="Sanya" FT /mol_type="genomic RNA" FT /country="China:Hainan" FT /collection_date="02-Apr-2009" FT /db_xref="taxon:89471" FT gene 69..1478 FT /gene="NSs" FT CDS 69..1478 FT /codon_start=1 FT /gene="NSs" FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:F8QPD4" FT /protein_id="AEH28139.1" FT /translation="MANAYLTAVGHVKAYGSKDKKAVNDCYAVFNGEGTNILNLFMHSN FT SGVKSAFSINELGRNEDMKIQEAETLTTLHDQKFFDHFGLDVIFCGHVLNVIVRKHDVS FT NIGCKFSQHNLIFCPNEETLDFTPTDKGLSLSEEEFFKATKITSEDFHPQGWCVEECKK FT NRFTVAETSCLELNYGSPIMGKTVAYWRENISGEKLVTVKPKCINVPTALPNRVLPSST FT VKAIQIGSELAKQATVVLSARQSLRQDLKSQYRVTFPGVFEDLAYSRSYLVPFGAENRI FT IRFDSRTISDRENEQTTLILKTSTKTIESNFINRAQEHKNCIKSIGERLGLVDFVVSEP FT NYSQIIASEFLRLQTVLSLRVSKYFKKPVIVYKLYDKETELKKVKIDGKFVSYNEDSEG FT NVYVLNKTLDLFPKSNSSFMYLSKTMSPFWKEFPFEQHLVVDYNEFSERYLNSSSDSEE FT EPSTSSTSSTS" FT gene complement(2351..3190) FT /gene="N" FT CDS complement(2351..3190) FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /note="nucleocapsid protein; structural protein" FT /db_xref="GOA:C8CG44" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:C8CG44" FT /protein_id="ACV33083.2" FT /translation="MSTVAKLTKEKIQELLSGGKSEVEIETEESTEGFNFHSFFADVRD FT EVKLNYNNGITILKSRKQVYAACKSGNYKFCGKKIVASGDNVGPNDWTFKRTEAVIRTL FT MISIAEKTENEEEKQKMYEKAMQLPLVAAYGLTVPAKFDMTALRLMLCIGGPLSLLASL FT HSLCPVVLPLAYFQNVKKEQLGIKNFSTYEQICKIARVMSASNMTFKKEFDELFKSCVK FT ILADCKPGTTSGISLKIYNEQVQFMEQAFKSSLVVDGMGESSSRSKASSSRSKSIEV" XX SQ Sequence 3257 BP; 987 A; 586 C; 551 G; 1133 T; 0 other; ggagcaatca cggtatcaag ttcattacaa caaacgatca gactaaaaca agaaatacta 60 tttcaggcat ggctaacgca taccttactg ctgtcggaca tgtcaaggca tatggttcaa 120 aggataaaaa agctgtaaat gactgttatg ctgtattcaa tggtgaaggc acaaacattt 180 taaatctatt catgcatagc aattctggag ttaagtcagc atttagcata aatgagctgg 240 gaagaaatga agatatgaag attcaggaag ctgaaacatt gactacattg catgatcaga 300 aattttttga tcatttcggt cttgacgtca tcttctgtgg tcatgttttg aatgttattg 360 tgaggaaaca cgatgtcagc aacattggat gcaaattctc tcagcataat ctgatcttct 420 gtcctaatga agaaacattg gatttcactc caacagacaa aggtttatct ctctctgaag 480 aagagttctt caaagcaact aaaatcacgt ctgaagactt tcaccctcag ggatggtgcg 540 ttgaagaatg caaaaagaat aggttcactg ttgctgaaac atcatgtcta gaactgaatt 600 atggatctcc tatcatggga aaaacagttg catattggag agagaacatt tctggtgaga 660 aattggtgac tgtgaaacca aaatgtatca atgttcctac tgctcttccc aacagagtgt 720 taccttcttc tactgtgaaa gcaatacaaa ttggatcaga gcttgcaaaa caagctacag 780 tagttctatc tgcacgtcag tctttgaggc aggatctgaa gtcacaatat agggtgactt 840 tccctggtgt ttttgaagat ctagcttatt caagatctta cctggttcct tttggagcag 900 agaacagaat aataagattc gattctagaa caataagtga tagagaaaat gaacagacca 960 ccttgatctt aaaaacttcc accaagacaa tcgaatcaaa tttcatcaac agggctcaag 1020 agcacaaaaa ttgcattaaa agtattggtg aaaggcttgg acttgttgat tttgttgtga 1080 gcgagcctaa ttacagccag atcattgctt ctgaattctt gagacttcag actgtcctct 1140 cgcttagagt gtcaaaatat ttcaaaaaac ctgtgattgt ttacaagcta tatgataaag 1200 aaacagaact gaagaaggtt aagatagacg gaaagtttgt atcatacaat gaggactctg 1260 aaggcaatgt ttatgtgcta aacaaaactt tggatttgtt tccaaagtct aactcttctt 1320 tcatgtacct cagcaagact atgtcaccat tctggaaaga gtttcctttt gaacagcatc 1380 ttgtagttga ttataatgag ttttctgaaa gatatctaaa ctcttcctct gatagtgaag 1440 aggaaccatc aactagcagc acatcatcta caagttaagc attttgcttt gtaaagagat 1500 ggaagaggga aaggagaaga aaagagcttc aaagagaagg aaaacaggtt aagttaattt 1560 ctaagagtct tatctgtata tgatcataaa aagataatta tgtttgtatt taaacaaaaa 1620 aagcaaaaag caaaaaaagc aaaaaagtaa aaagcaaaaa aagtaaaaaa tagaaataaa 1680 aaacaaaaac aagatgtaaa agtaaaatta ttttagtaaa taagcaaatt aatctaaata 1740 aaagtcctct aggaggcaaa taatgaccta gatactctgg atcagattgg ccaacatcac 1800 cctttcgggt tttattgtaa ttatacatag atacatacac actaatacat tcattacagt 1860 ttgttttcgt tttcagtttt tatgattttt ttgtttttgt tttatatatt tttacttttt 1920 ttggtttttt gattttatca tttttttgtt cgttttctgt tttttgtttt tgttttgttt 1980 tttgtttttg ttttttgctt tttttgcttt ttttgctttt tttgcttttt ttgtcttctt 2040 catttacttt actcataatt tagatttcat gttcttgttt ttcttctctc tctctttctc 2100 tctttttctc tttctctttt ctctttcctt tctccttcta tctctctctt ttgctttctc 2160 tctctctcgt ccctctctct ctcttttctc tcttttctct ctcttttttt atttcattca 2220 actagttaaa tattttacag aagtacattt cttctggtct aatttaaaag tctttatttt 2280 gattaaattt tatgaagtgt tctttttcct tgttttgcac tctgctgttt gatggaacag 2340 aatgctctat ttaaacttca atggacttag atctggaaga agaagcttta ctcctagaag 2400 agctctcacc cattccatca actacaagag aagatttgaa agcctgttcc atgaattgca 2460 cctgttcatt gtaaatcttc agggatatgc cactggttgt tcctggtttg cagtcagcca 2520 agattttcac acaacttttg aaaagttcat caaattcttt cttgaaggtc atattgctag 2580 cagacataac acgagcaatt ttgcagatct gctcatatgt agagaaattc tttattccta 2640 attgctcttt cttgacattc tgaaaatagg ccaaaggcag aacaacaggg cagagtgagt 2700 gaagactagc aagcaaagac agaggtcctc caatgcatag cattaatctc aaagctgtca 2760 tgtcaaactt tgcaggcaca gttaaaccat acgcagcaac caatggaagc tgcatggctt 2820 tctcatacat tttctgcttt tcttcctcat tctctgtttt ttctgcaatg ctgatcatca 2880 aagttctgat gacagcttca gttcttttaa atgtccaatc attaggacca acattatccc 2940 cagatgcaac tatctttttc ccgcaaaact tgtagttgcc agatttgcaa gctgcataaa 3000 cttgctttct gctttttaga atagttatac cgttattata atttaatttc acctcatctc 3060 tcacatccgc gaagaatgaa tggaagttaa atccttcagt tgattcctct gtttctattt 3120 caacttccga cttgccacca ctaagaagtt cttggatttt ctcttttgtc agcttagcaa 3180 cggtagacat ggtgtttact taggaaacgt gtactctgac ttgttgatgt tgaatttttt 3240 gatacctcga ttgctct 3257 //