ID GQ387499; SV 1; linear; genomic DNA; STD; VRL; 5905 BP. XX AC GQ387499; XX DT 14-JAN-2010 (Rel. 103, Created) DT 09-MAY-2010 (Rel. 104, Last updated, Version 2) XX DE Porcine parvovirus 4 clone 17 replicase, ORF3, and capsid genes, complete DE cds. XX KW . XX OS Porcine parvovirus 4 OC Viruses; Parvoviridae; Parvovirinae; Copiparvovirus. XX RN [1] RP 1-5905 RX DOI; 10.1007/s00705-010-0646-8. RX PUBMED; 20339886. RA Cheung A.K., Wu G., Wang D., Bayles D.O., Lager K.M., Vincent A.L.; RT "Identification and molecular cloning of a novel porcine parvovirus"; RL Arch. Virol. 155(5):801-806(2010). XX RN [2] RP 1-5905 RA Cheung A.K.; RT ; RL Submitted (16-JUL-2009) to the INSDC. RL Virus and Prion Diseases of Livestock, National Animal Disease Center, 1920 RL Dayton Ave, PO Box 70, Ames, IA 50014, USA XX RN [3] RP 1-5905 RA Wang D.; RT ; RL Submitted (16-JUL-2009) to the INSDC. RL Departments of Molecular Microbiology and Pathology and Immunology, RL Washington University in St. Louis, St. Louis, MO 63110, USA XX DR MD5; dacd4c79aa85ded4db84e12e9acf556e. DR EuropePMC; PMC2999605; 21092136. DR EuropePMC; PMC3078135; 21525999. DR EuropePMC; PMC3676418; 23762339. DR EuropePMC; PMC5491021; 28662150. XX FH Key Location/Qualifiers FH FT source 1..5905 FT /organism="Porcine parvovirus 4" FT /host="swine" FT /mol_type="genomic DNA" FT /country="USA" FT /collection_date="Feb-2006" FT /clone="17" FT /db_xref="taxon:707546" FT CDS 849..2645 FT /codon_start=1 FT /product="replicase" FT /db_xref="GOA:D2WLC1" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR014835" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:D2WLC1" FT /protein_id="ADB20207.1" FT /translation="METYWTGICRLFPDVLKIPGVYEGRYIFEVPVSTRDCMKWPDIFG FT NENNSENQQSGAAPPAPRENLSSNLVIAVRQAEALFRELQKELRKSCRLGVDPGIFMQL FT EEVDSKGGLHLHWCVSVSAGTPRDVLTIFKNTEKKVSLYYFGVEGLSFFVPHKNKHGAW FT KSTDEGFIYNYLLKKLPLKECLYAWTTIGGAIGDACLNTDKRKELLDNRQDPAVIEELS FT APMYKCATGEKMLDIVQWLVDNNICSESRWENKNALSLYSFLATQAGGYMAKQCLRIAQ FT QKLLKEKPLGLTLMDFKDMNALRRFQQDEGEMTFDNNRMHYIFAINNYDPKIASVIMYF FT WSMKQTGKRNCVWFYGPATTGKTNMAQAICHSSANYGNVNWNNANFPFQDIAGAQVGWW FT EEGKMTGDMVEAAKALLGGTALRIDRKCMQSIEVNSPPFLITSNVDMTIVQEGSFVSFE FT HQQPLEDRMIKFSFNMTLPGNFGLITSEEVKSFFRMGAKLAAQPDIMNCPIFKKGPASI FT RHLVPVGEIPPPKEMKHKRQPLYMRAEPDEIQDNPEELDHWFEEEAPRKKKQKTKNTAT FT KNPAETVEIITETEFIPAPGKR" FT CDS 2795..3409 FT /codon_start=1 FT /product="ORF3" FT /db_xref="UniProtKB/TrEMBL:D2WLC2" FT /protein_id="ADB20209.1" FT /translation="MFGGQGIIPILTWEQLEAFMWAGQGMSIDYYRSCLSDCMLFGEKF FT NIHMPKTKNLLLEAEYLYRLFHSGFANSAQGFRERVERWRTESKLRCPQFDRPMDASQR FT HAYLGFFYQALSKLPENASEEDILQTIHDSDDTSKEKFYAFMEKIQQEPEYVFKEPDSI FT PQPEAPVTAVPVETSPTENRYLLLHIKILRKTRWRNVCLVP" FT CDS 3673..5859 FT /codon_start=1 FT /product="capsid" FT /db_xref="GOA:D2WLC3" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="UniProtKB/TrEMBL:D2WLC3" FT /protein_id="ADB20208.1" FT /translation="MQKHGHWPHLWAPFVDRQMSQEIQQVLKGSTKLSQKLLANFIIAL FT WRAKEKIGAPIYEIVKGVFPSVDKKTVESLLPHPDPIPAPPSSPQRGSKRASPPQSPNA FT HDEDTMSGHKRQKTMEVESECDKSLLCPTQNAGADFELCGTGGGATNEKGTWVGGTQFT FT DTSIRTFGTRRCVLSAFPDTYCSMMSGDAIPSIIFNTPWYYYDLNIMSCHFSPSAFQTL FT IEDYDAFRPRSLTVHLKELVIKDVCQQQGLQAEQVSDNNSATLLAFEDVNYELPYVLGG FT GQVSVPGHLPGQPYQLPKYSYRTVGKPDPNSGFVPGRNTHPDQGPGHPKASKTIWYSQY FT LETQDTEFYILENHKATILHSGNTFSQNYNFPDLPFEQLTQYMWDARRQDNPLIDQRIQ FT VMSRMYDDGPQKTFAIEVNPYIVPFTVKSTSRPAMFLAGGRFKDGDYSITGPGDREKTS FT FRYYNDPPWIITRDTYLFSSDLAKTEREQPGPRQGDTVVRTPDGTLIVTTNALAYGYTT FT EYLKNIPLLSSKYHGVENFRLAVENERGYSMPGHPSHIRETLFRGKLPSGIRESTIKSE FT DQRKEITFPDYMGSVNEKTTANLESQIWSQIPNTDITEKCTTPPLSIWGMKNPPPMVFL FT RLLAQMGPPRRSACSGSIPSNTYLNQYCQFLLTYEMEWDVIKRTRKTVRWNPIPPPQIP FT MGPNNLPVYILNKEGQYRMPTEVWTAKQRPRHRR" XX SQ Sequence 5905 BP; 1904 A; 1161 C; 1350 G; 1490 T; 0 other; tgtttttgaa aagcgccagg cctctcgccg gtcgcccctg acgtcacatc cgcttccggg 60 tcaaagggcg gggtcaaagg tcaaaggtct tcatacgtca tatccgcttc cgggtcatga 120 cctttgaacc ggaagtaccg gaagtgaccc ggaagtaccg gatgacctct tgcgcaatct 180 ctgagaaaga gagaatcttt ttcgagtgtt gggcgacgcc ggcctgctaa tcaatacact 240 agagggcttc gccatctttg acagatatgt tgcagtcaac ttccgggggt gggacttccg 300 gggtcaaagg tcacttccgg gtcaaaggtt gtttttccgg tgacgtcacg ggatgtgacg 360 cagtacagac cgacgagata tttggcgctt ttcatacgtc atttccggag gaggagttca 420 tttgcataat ttatgcaaag taggaggagc taattagctc ttcccacttt gcataaatta 480 tgttaatgag atgctaatta attaatgcaa agtaggagga gcttattgac ttctcctact 540 ttgcataatt tatgcaaatg agatgtaaat taatttatgc aaagtaggag gagccttttt 600 tgattggacg gggcttcaaa tccattaatt tgcataattt atgcaaagag gaagttaacc 660 tgattggtca gtttttttgg cgggaagcaa tttgattgga cgggaactta agtcctaatt 720 tgcattgacg tggaccaatc agaattgagt acatattata taaggagggc gaaaaagagg 780 aagtttgcca tttgcgtttt ggagaccgtc gcgagcagaa ctccgtcgtt ttcggcctgt 840 atttgaagat ggaaacctac tggacaggta tttgcagact ttttcctgat gttttaaaaa 900 tacctggtgt ttatgaagga cgctatattt ttgaagttcc tgtttctacg cgtgattgca 960 tgaaatggcc tgatatattt ggcaacgaga ataatagtga aaatcaacag tctggcgcgg 1020 cgcctccggc gccgcgcgaa aatcttagta gtaatctggt aatcgctgtt cggcaggcgg 1080 aggctttgtt tagagagctg cagaaagagc ttagaaaatc atgtcgttta ggggtagatc 1140 ctggcatttt tatgcagtta gaagaagtag actcaaaagg tggcttgcac ttgcattggt 1200 gtgtgtctgt gtccgctggt actccgcggg atgtgcttac aattttcaaa aatacagaga 1260 agaaggtctc tctgtactat tttggggtgg agggtctgag cttctttgtg ccccataaga 1320 ataaacacgg ggcctggaag agcacggacg agggctttat ctacaactat ctgcttaaaa 1380 aactgccgct gaaagagtgt ttatatgctt ggaccaccat cggtggagcc atcggtgatg 1440 cttgcctaaa tactgataag agaaaggagt tgctggataa tagacaggac ccagcggtga 1500 tcgaagagct ctcagctccc atgtacaaat gtgccaccgg ggagaaaatg cttgatatcg 1560 tgcagtggct ggtggataac aacatctgct ctgagagcag atgggaaaat aagaatgctc 1620 taagtctata ctcgtttctg gccacccaag caggtggata catggctaaa cagtgtctga 1680 gaatcgctca gcaaaagtta ttaaaagaga aacccctggg gttgactctg atggatttca 1740 aggatatgaa tgctctgcgg cgctttcagc aggatgaggg ggaaatgact tttgacaata 1800 acagaatgca ttatatcttt gccattaaca actatgatcc taaaattgct tcggtgataa 1860 tgtacttttg gagcatgaaa caaacgggaa agaggaactg tgtgtggttt tacgggcctg 1920 ccacaacagg aaagactaac atggctcaag ccatctgcca cagttctgca aactatggca 1980 atgtgaactg gaataatgca aatttcccgt ttcaagatat cgcgggggct caggtagggt 2040 ggtgggaaga gggaaagatg actggtgata tggtcgaagc tgctaaagca ctactggggg 2100 gaactgcttt gcgaatcgac cgcaagtgca tgcaatctat tgaggttaac agtccacctt 2160 tcctcataac ctcaaatgtg gacatgacta ttgtacaaga gggaagtttt gtaagctttg 2220 aacatcagca accattagag gacaggatga taaagtttag ctttaatatg accctgccgg 2280 gcaattttgg tttgattacc agtgaggaag tgaaatcttt ttttcggatg ggagctaaac 2340 ttgctgcgca accggacatt atgaactgcc ctatatttaa aaaaggacct gccagtatta 2400 gacatttagt tcctgttgga gagatcccac ccccaaaaga aatgaagcat aaaaggcagc 2460 cactctacat gagagcggaa ccagatgaaa ttcaagacaa tccagaagaa ctggaccact 2520 ggttcgaaga agaagcaccg agaaagaaga aacagaaaac aaaaaatact gcaactaaga 2580 accctgctga gacggtggag attataactg agactgaatt catccctgca ccaggtaaga 2640 gatgagtact tatttactat cagaataaag gataaactgt acccagcagt agttgataag 2700 tgcccctctc ttacagatac acagccacaa ctggtgtttg acatccagtt agaagaggaa 2760 gcagaaattt cagatatcat cggagaacaa taaaatgttc ggcggacaag gtattatacc 2820 gatactaaca tgggagcaat tagaagcttt tatgtgggct gggcaaggaa tgtcaattga 2880 ctattacaga agctgtttaa gcgattgtat gctatttggg gaaaaattta acatccatat 2940 gccaaaaaca aaaaatttat tattagaagc tgaataccta tatagacttt ttcacagtgg 3000 ttttgccaat agtgcacaag gtttcagaga aagagtagaa agatggagaa cagaaagcaa 3060 actgagatgt ccccaatttg atagacccat ggatgcctca caaaggcatg catacttagg 3120 atttttctat caagccctca gtaaattgcc ggaaaatgcc tctgaggaag atattctgca 3180 gaccatacat gattctgatg acaccagtaa agaaaaattc tatgcattta tggaaaaaat 3240 tcagcaagaa ccagaatatg tgtttaaaga gcctgatagc attccgcaac cagaagctcc 3300 tgttacagca gttccggttg agacatcacc aactgaaaac aggtaccttc tcttacacat 3360 caagatacta agaaagacaa ggtggaggaa cgtttgcctt gtcccttaga tttttgtgat 3420 gaacattggc agggcagaca cccgctagga ttcaaggaag aagaagaaga aatacaaaaa 3480 gaaatagaag aagatagaag agaagaaaca gaaacaatcg aaaaagcgca acagggtgaa 3540 ggagaacatg aaaagggagg actcacctgg cccggtcatc gctacacagg tccattcaat 3600 cctctccctc atggaaaacc tgctgatcaa cttgacgaag cagctcttcg acatgataca 3660 aggtacaaaa caatgcagaa acacggtcac tggcctcatt tatgggcacc atttgttgac 3720 agacagatga gccaagaaat tcaacaggtt ttaaaaggtt ctacaaaact gagccaaaaa 3780 ctacttgcaa acttcatcat agcactatgg cgagcaaaag aaaaaatagg agctcctata 3840 tatgagattg taaaaggggt ttttccaagt gttgataaaa aaactgttga aagcctttta 3900 ccgcaccctg accctatacc tgctcctcca tcttctccac agcgaggatc caaacgtgca 3960 tctcctcctc agagtcctaa tgcacatgat gaagatacaa tgagcgggca caagcgtcag 4020 aaaactatgg aagtggaatc tgaatgtgat aagtctttgc tttgtccaac gcagaatgct 4080 ggagctgatt ttgagctttg cgggacggga gggggggcaa ctaatgagaa agggacatgg 4140 gtgggaggga cacaatttac cgatacatct attaggacat ttggtactag aagatgtgtt 4200 ctctcagcgt ttcctgacac ttactgttct atgatgtctg gagacgctat accttctatt 4260 atttttaata caccatggta ctattatgat ctaaacatta tgtcctgcca tttctctcca 4320 agtgcttttc aaactttaat tgaagattat gatgcattta gacctagatc gctaacagtt 4380 catttaaaag agcttgtaat aaaagatgta tgtcagcaac aaggtttaca agctgagcag 4440 gtatctgaca ataactctgc tacactgctt gctttcgaag atgttaatta tgaacttcca 4500 tatgttttag gtggtggtca agtatctgtg ccaggacatc taccgggaca accatatcaa 4560 ctgccaaaat actcatacag aactgttgga aaaccagacc caaacagcgg cttcgtgccg 4620 ggaaggaaca cacatccaga tcaaggacca ggacatccaa aagcaagtaa aacaatttgg 4680 tactcgcaat atttagaaac ccaagacacc gaattctata tattagaaaa ccacaaagca 4740 acaattttac actctggaaa tacattttcc caaaattaca attttcctga tctgcctttt 4800 gagcagttga cacagtatat gtgggatgca cggaggcagg acaatccatt gatagatcag 4860 agaatacagg tgatgagcag aatgtatgat gacggcccac agaaaacatt tgctatcgaa 4920 gtgaacccat acattgtacc attcacagta aaaagcacca gcagaccagc tatgttctta 4980 gcgggaggaa gatttaaaga tggtgattat tcaataacag gtccaggaga tagagaaaaa 5040 acgagtttca gatattacaa tgatcctcca tggatcatca ccagagatac ctatctcttc 5100 tccagcgatt tagctaaaac tgaaagagaa cagccaggac ccagacaggg agacacagta 5160 gttaggaccc ctgatggaac actgatagtg actactaatg cattagctta tgggtacaca 5220 acagaatatc taaaaaacat tccgcttttg agttccaaat accatggggt tgaaaacttc 5280 agactagctg ttgaaaatga aagaggatat tcaatgccag gtcacccgtc acatatcaga 5340 gaaacattat tcagaggtaa actgccaagt gggataaggg aatcaactat taaatcagag 5400 gatcaaagaa aagaaataac atttccagat tacatgggtt ctgtaaatga aaaaacaaca 5460 gcaaatttag aatcgcagat atggtctcag ataccgaaca ctgatatcac tgaaaaatgt 5520 acaacaccac cactatccat ttggggtatg aaaaacccac caccgatggt tttcctgaga 5580 ctcctggcac agatgggacc accaagaaga agcgcctgca gcggatccat tccaagcaat 5640 acatatttga accaatattg ccaatttttg cttacatatg aaatggaatg ggatgttatt 5700 aaaagaacca ggaaaacggt gaggtggaat ccaattcctc ccccgcaaat tccgatggga 5760 cctaacaatc ttcctgttta tattttgaac aaagagggac aatacagaat gccgacggaa 5820 gtttggaccg caaaacagag acccagacac cgcagatgat atcaataaag tttttgaaat 5880 taaaaaaaag acttcctctt tattg 5905 //