ID GQ373254; SV 1; linear; genomic DNA; STD; VRL; 2742 BP. XX AC GQ373254; XX DT 27-AUG-2009 (Rel. 101, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 2) XX DE Papaya leaf curl China virus segment DNA A, complete sequence. XX KW . XX OS Papaya leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RA Thanh T.N., Vinh D.N., Mukheerjee S.M.; RT ; RL Submitted (10-JUL-2009) to the INSDC. RL Plant Molecular Biology, International Centre For Genetic Engineering and RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; 08ae45ab24848ff816dc98eeae3c817c. XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Papaya leaf curl China virus" FT /segment="DNA A" FT /host="tomato" FT /isolate="Hanoi 112" FT /mol_type="genomic DNA" FT /country="Viet Nam:Tu liem, Hanoi" FT /collection_date="06-Feb-2007" FT /db_xref="taxon:229634" FT gene 131..481 FT /gene="AV2" FT CDS 131..481 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:C8C9X6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C8C9X6" FT /protein_id="ACU65101.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLLRDL FT ISVIRAKDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PKAQDVQNVQKP" FT gene 291..1064 FT /gene="AV1" FT CDS 291..1064 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C8C9X7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C8C9X7" FT /protein_id="ACU65102.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYASRAAAPTVLVTNKRRSW FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVVHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1061..1465) FT /gene="AC3" FT CDS complement(1061..1465) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:C8C9X8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C8C9X8" FT /protein_id="ACU65103.1" FT /translation="MDSRTGEAITATQAESGVYIWTVKNPLYFKIISHDERPFLMNNDI FT ITIQVQFNYNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRACDHVLWDVLEKTEYVTHSNIIKFNLY" FT gene complement(1206..1610) FT /gene="AC2" FT CDS complement(1206..1610) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein/RNAi suppessor" FT /note="suppressor" FT /db_xref="GOA:C8C9X9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C8C9X9" FT /protein_id="ACU65104.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRNAKKATRRRRVDLPCGCSYFIALG FT CHNHGFSHRGSYHCNSSREWRIYLDGQKSPIFQDNQPRRETISDEQRHHHNTSPIQLQP FT EESVGNTPMFSNLPDLDSFTSSDLAFLKSI" FT gene complement(1513..2598) FT /gene="AC1" FT CDS complement(1513..2598) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:C8C9X4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C8C9X4" FT /protein_id="ACU65105.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKKEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLISPSRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGLFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH FT NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDASYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKIWAIKNAIFVTLQGAL FT YSGSYQSATPQRQESNEETES" FT gene complement(2148..2441) FT /gene="AC4" FT CDS complement(2148..2441) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C8C9X5" FT /protein_id="ACU65106.1" FT /translation="MELLTCMFSSNSKGNSNVKTKDSSISYPQAGQHISIRTFRQLKAQ FT QMSSPIWTKTETCLIMDFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2742 BP; 743 A; 539 C; 607 G; 853 T; 0 other; accggatggc cgcgattttt tttacatggc cccaccacta acaaatgtcc tccacttaga 60 acgctccctc aaagcctatt tgattcaaat ccattatata tacttggtcc ccaagtactc 120 actttaaaat atgtgggatc ctttactgaa tgagtttccc gaaaccgtgc acggttttag 180 gtgtatgtta gcgattaaat atttgcaatt agtagaaaat acatactctc ctgatacatt 240 agggtacgat ttgcttcgtg atttaatttc agttattcgt gctaaggact atgtcgaagc 300 gtcccgcaga tatagtcatt tccactcccg catccaaggt gcgtcgccgg ctgaatttcg 360 acagcccgta tgccagccgt gctgctgccc ccactgtcct cgtcacaaac aaaaggaggt 420 catgggtgaa tcggcccatg taccgaaagc ccaggatgta cagaatgtac aaaagccctg 480 atgttcctcg aggatgtgaa ggcccatgta aggttcagtc ctatgaacag cgtcatgatg 540 tagtgcacgt aggtaaagtc atttgtgtgt cggatgttac tcgtggtaac gggttgactc 600 atcgagtggg aaagaggttt tgtgttaagt ctgtttatgt tttgggcaag atatggatgg 660 atgagaacat taagaccaag aatcatacta atactgtgat gtttttttta gtgcgtgata 720 ggagaccatt tgggactcca caagattttg gtcaggtgtt taacatgtat gataacgagc 780 caagtacagc cacggtgaag aacgacaaca gagatcgctt tcaagttcta cggcgttttc 840 aggctactgt tactggtggt cagtatgcaa gtaaggagca agcaatagtt aggaagttta 900 tgaaggtgaa caaccatgtg acgtataatc atcaagaagc tgcgaagtat gacaatcaca 960 cagagaatgc tcttttgttg tatatggcat gtacccatgc tagtaatcct gtgtatgcta 1020 ctttgaaaat cagaatctat ttctatgatt ctgttcagaa ttaataaaga ttgaatttta 1080 ttatatttga atgtgttaca tattctgttt tttccaatac atcccataat acatgatcac 1140 atgctctaat tacattgtta atactaatta cacccaaatt atctaaatat ttcatacatt 1200 gaaccctaaa tactcttaag aaacgccaag tctgaggacg taaacgagtc cagatctgga 1260 agattagaaa acattggtgt attcccaacg ctttcctcag gttgtaattg aattggactt 1320 gtattgtgat gatgtcgttg ttcatcagaa atggtctctc gtcgtggctg attatcttga 1380 aatatagggg atttttgacc gtccagatat atacgccact ctctgcttga gttgcagtga 1440 tagcttcccc tgtgcgagaa tccatgattg tgacagccta gtgcaatgaa gtatgaacag 1500 ccacaaggga gatcaactct ccgtctcctc gttgctttct tggcgttgcg gtgttgcact 1560 ttgataggaa cctgagtaga gtgcgccttg gagggtgacg aagatcgcat tttttattgc 1620 ccagatttta agtgcgctgt tcttatcttc gtccaagaat tctttatagc ttgaattggg 1680 gccgggattg cagaggaaga tagtgggaat tcccccttta atttgaacgg gttttccgta 1740 ctttgtgttg ctttgccagt ccctttgggc ccccatgaat tctttaaaat gctttaggta 1800 gtggggatca acgtcatcaa tgacgttgta cgaggcatca ttattgtata ccttcggact 1860 caaatcaaga tgaccacaca aataattatg tggtcctaat gacctagccc acatcgtctt 1920 tcccgtccga ctatcgcctt cgataactat acttatcggt cttaaaggcc gcgcagcggc 1980 actgacaacg ttctctgcag cccactcttc gagttcctct ggaactcgat caaaggaaga 2040 agaagaaaaa ggcgaaacat aaacctccat tggaggagta aaaatcctat ctaaattatt 2100 atttaaatta tgaaactgta aaacataatc tttaggtgcc ttttccctta gtatattgag 2160 ggccgaagct ttggaccctg aattgattgc ctcggcatat gcgtcgttgg cagattggca 2220 acctcctcta gccgatcttc catcgatctg gaaaagtcca tgatcaagca cgtctccgtc 2280 tttgtccata taggacttga catctgttga gcttttagct gcctgaatgt tcggatggaa 2340 atgtgctgac ctgcttgggg atatgagatc gaagaatctt tggtttttac attggaattt 2400 cccttcgaat tggatgagaa catgcaggtg aggagttcca tcttcgtgga attctctgca 2460 gatgcggata aatagtttat ttactggggt ttctaggttt ttaagttggg aaagtgcttc 2520 ttttttagtg agagagcagt gtggatatgt gaggaaataa tttttggcat ttattctgaa 2580 tttattagga ggagccattg actggtcaat cggtgtctca taaacttggc tatgcaattg 2640 gtgtctggtg tcttatttat atgtggacac caaatggcat tatcgtaatt cccaaaagaa 2700 attcaaaatt caaattggta aagcggccat ccgtataata tt 2742 //