ID GQ369529; SV 1; linear; genomic RNA; STD; VRL; 3811 BP. XX AC GQ369529; XX DT 01-AUG-2012 (Rel. 113, Created) DT 01-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Arabis mosaic virus isolate ba segment RNA2-IV, complete sequence. XX KW . XX OS Arabis mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3811 RA Marmonier A., Vigne E., Komar V., Demangeat G., Besse S., Gugerli P., RA Lemaire O.; RT "Comparisons of genomic and pathological features among barley and RT grapevine infecting-isolates of Arabis mosaic virus"; RL Unpublished. XX RN [2] RP 1-3811 RA Marmonier A., Vigne E., Lemaire O.; RT ; RL Submitted (09-JUL-2009) to the INSDC. RL UMR 1131, INRA, 28 rue de Herrlisheim, Colmar, 68 68000, France XX DR MD5; d3a070a489ca9e85f22691b0ab6ccca7. XX CC GenBank Accession Numbers GQ369526-GQ369530 represent sequences CC from the 5 segments of Arabis mosaic virus isolate ba. XX FH Key Location/Qualifiers FH FT source 1..3811 FT /organism="Arabis mosaic virus" FT /segment="RNA2-IV" FT /host="winter barley cultivar Express" FT /isolate="ba" FT /mol_type="genomic RNA" FT /country="Switzerland" FT /collection_date="1991" FT /note="identical sequence found in winter barley cultivar FT Mannitou" FT /db_xref="taxon:12271" FT CDS 261..3617 FT /codon_start=1 FT /product="polyprotein P2-IV" FT /db_xref="GOA:I6LL58" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:I6LL58" FT /protein_id="ADJ39332.1" FT /translation="MGKFYYSNRRLACYAQATNRHLGGSFEQWLQCMEDSAFRAEVKAR FT VQTEREEVRVKRLFSHPVGRGPAEDPRGVNWAYICLGTTAHWAGVPGDMVPPPDPVEVI FT KGGVPPVKVIPSPPPMPRPYFRPIGAFAPTRSGFIRATVERLTREREELRAAALFAELP FT LEYPQGAPLVVPRGFAAMRWTYHTTWRRWYDTSDERALRVHPGGPALPPPPPPPPIQKP FT PSFEERLQAALDRQSCARAFALETSLGLNMAWVGTAVVPSISVCCADGRTTGGQTIAQE FT ADPINHRVASNTAPGRAQWISERRSALRRREQANSLQGLAAQTDMTFEQARNAYLGAAD FT MIEQGLPLLPPLRNAYAPRGLWRGPSTRANYTLDFRLNGIPTGQNTLEILYNPVADEEM FT DDYRDRGMSAVVIDALEIAINPFGMPGNPTDLTVVATYGHERNMERAFIGSSSTFLGNG FT LARAIFFPGLQYSQEEPRRESLIRLYVASTNATVDADSILAAISVGTLRQHIGSLHNRT FT VASSVHAAQVQGTTLRATMMGNAVVVSPEGSLVTGTPEANVQIGGGSSMRMVGPLAWEN FT VEEPGQTFTIRNRSRSMRVDRNADVGVALPRMSTTTRGLAGRGSVQVPKDCQAGKYLKT FT LDLRDMVSGFSGIQYEKWITAGLVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSIS FT TTASPAYTLSVPHWLLHHKNGTTSCDIDYGELCGHAMWFNATTFESPKLHFTCLTGNNK FT ELAADWEFVVELYAEFEAAKTFLGRPNFIYSADAFNGSFKFLTIPPLEYDLSTTSAYKS FT VSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICSPCTYGIVLRVVSEWNGV FT TNNWNQLFKYPGCYIDEDGRFEIEIRSPYHRTPLRLLDGQAASSFTGTLNFYAISGPIA FT PSGETAKMPVVVQIEEIALRDLSVPTFPNDYFLWVDFSAFTVDTEEYVIGSRFFDISST FT TSTVALGDNPFAYMIACHGLHHGILDLKLMWSLEGEFGKSSGGVTITRLCGDKATGMDG FT ASRVCALQDMGCETELYVGNYAGANPNTALSLYSRWLAIKLDKAKSMKMLRVLCKPRGN FT FEFYGRTCFKV" XX SQ Sequence 3811 BP; 910 A; 846 C; 956 G; 1099 T; 0 other; atgaaaaatt ttgtggagtt ttcatataaa cgcaatccac aaccctttca accaagagtt 60 taagaaactc aaaattgttc acagccaatc cgttaagagc ggaacaaaag tcaaaccgtt 120 aagagcggta ccaaagcgaa gagtttaaga aactcatcat tgcctccctt ttctttctta 180 cttacgtgct ttatttattt agcgtttgtg tagtctgctt ctttggagga gcgttttgtt 240 tcattttctt ttctgccctt atgggcaagt tttactatag taacaggcgt ttagcctgtt 300 acgcacaagc tacgaaccgc catctgggcg gttcttttga acaatggctc cagtgtatgg 360 aggactcagc ctttcgagct gaggttaaag cccgtgtcca aacggaacgg gaggaagtcc 420 gcgttaagcg gcttttttcc cacccggttg gtcgtgggcc cgctgaagac cctcgcgggg 480 tcaattgggc atatatatgc ctgggaacta ccgcccactg ggctggcgta cccggggata 540 tggtgcctcc ccccgatccc gtggaggtta ttaagggggg ggtgccacct gtgaaggtta 600 ttccttcccc gccccctatg ccaaggcctt actttaggcc aattggggct tttgcaccaa 660 cccggtccgg gttcatacgg gccactgtgg aaagactcac ccgggaacgg gaagagttgc 720 gagctgcggc actctttgcc gaattgcctt tggagtaccc ccagggtgcg cctttggttg 780 tcccccgtgg ctttgcagcc atgcggtgga cttatcatac tacctggagg cggtggtatg 840 acaccagtga cgaacgcgct ttgcgtgtcc atcctggtgg tcctgctttg cctccaccac 900 ccccccctcc cccaatccaa aaaccaccct cttttgagga gaggttgcag gctgcccttg 960 ataggcagtc ctgcgctagg gcttttgccc tagagacttc actgggcctt aatatggcct 1020 gggtgggaac ggctgtcgtc cccagcattt ctgtatgctg tgctgacggc aggactaccg 1080 gtgggcaaac aattgcccag gaagctgatc ctattaatca tagggtcgct tccaatacag 1140 cccccggtag ggcacaatgg atctcggagc gccgcagcgc tctgagaaga agggaacagg 1200 ctaatagcct gcagggtctt gctgctcaaa ctgacatgac atttgagcag gccaggaatg 1260 cgtatcttgg tgctgccgat atgatagagc aaggcctacc gttactacct ccactaagga 1320 atgcttatgc acctcgtggt ctatggaggg gaccttccac tagagccaat tacactttgg 1380 atttcaggct caatggaatt cccacgggac aaaatacttt agaaatatta tataatcccg 1440 tggcggacga ggagatggat gactaccgag acaggggtat gtcagcagtc gtgatcgatg 1500 cactggaaat tgctatcaat ccttttggaa tgccaggcaa tccgactgat cttactgtcg 1560 tggcaacata tgggcacgag cgtaatatgg agcgtgcctt tattggttct tcatcaacct 1620 ttcttgggaa tggtttggcg agagctattt tctttcctgg cttgcaatat agtcaggaag 1680 aacctaggcg cgaatctctt attcgcctgt atgttgcttc taccaacgcc actgtcgatg 1740 ctgattctat actggcagcc attagtgtgg gcactctgcg ccaacacatt gggtcactac 1800 ataatagaac agtggcgagt tctgtgcatg ctgctcaggt gcaaggcact actttgaggg 1860 ctactatgat gggtaatgcc gttgtagtct cccctgaagg aagtcttgtt actgggaccc 1920 cagaagccaa tgttcaaatt ggaggaggtt cgagcatgcg gatggttggc cccctggcat 1980 gggaaaatgt tgaagagcca ggtcaaacct ttactataag aaaccgctcc cggtctatgc 2040 gagtagatcg gaatgctgat gttggagttg ctcttcctcg gatgagtact acaacgcggg 2100 gtcttgctgg tagaggttct gtccaggtgc ctaaagattg ccaggcaggg aaatacttga 2160 aaacccttga tttaagagac atggttagtg ggttttcagg tattcaatac gaaaagtgga 2220 tcactgctgg acttgtaatg ccagatttta aagtagtgat tcgctatcca gccaatgcct 2280 ttacgggtat tacgtgggtt atgagctttg atgcctataa tcgaattact agtagtattt 2340 ccactactgc tagtcctgcg tataccctgt cggtccctca ttggctgtta catcataaaa 2400 atgggacaac ctcatgtgat attgattatg gggagctctg cggtcacgcg atgtggttta 2460 atgccactac gtttgagagc cccaaacttc atttcacatg cctcactgga aataacaaag 2520 agctagctgc agattgggag tttgtagttg agctatatgc tgagtttgag gcagcaaaaa 2580 cttttcttgg gagacctaat ttcatttaca gtgctgacgc ttttaatggg tctttcaagt 2640 ttctgacaat cccaccattg gaatatgacc tgagtaccac cagtgcttac aagagtgtat 2700 cccttctttt gggccagact cttgttgatg ggactcataa ggtgtataat tacaataata 2760 cacttttgag ttactatctt ggcattggtg gtgtggtcaa gggcaaagtg catatatgta 2820 gcccttgtac ttatggcata gtcctaagag tcgttagtga atggaacggg gtcactaaca 2880 actggaatca actgtttaaa taccccgggt gttacatcga tgaagatggg cgatttgaaa 2940 ttgaaatacg ctccccatat catcgtactc cactgcgctt acttgatgga caggcagcga 3000 gctcgtttac gggcacgctg aacttctatg ctatttcggg gccaattgcc cccagtggag 3060 aaactgctaa aatgccagtg gttgtgcaga ttgaagaaat tgcactccgt gatctttcag 3120 tcccaacctt ccctaatgat tatttcctat gggttgattt ttcagcattc actgtggata 3180 ctgaggaata tgtaataggg tcgaggtttt ttgatatttc ctcaaccact agtactgtgg 3240 cccttggaga taatcctttt gcctatatga tagcttgtca tggactccat catggaattc 3300 ttgaccttaa gttaatgtgg agtttagaag gtgagtttgg aaaaagctct ggtggtgtca 3360 ctatcacacg tctgtgtggt gataaggcca ctggcatgga tggggcatct cgtgtttgtg 3420 ctttacagga catggggtgc gagactgagc tgtatgtagg gaactatgct ggtgctaatc 3480 caaacacagc actttcctta tacagtcgct ggcttgctat taagctggat aaagcaaaga 3540 gtatgaaaat gctcagagtt ttgtgcaagc ccagaggaaa ctttgaattt tatggaagaa 3600 cgtgcttcaa agtttagttt cctaacaata gtcttgggaa tctgacttta aaagacccat 3660 ttgtattata tttataatta gcttgtttac tgcttttgtg tgtttaattt catgcattta 3720 gtggcgacag tgtgttgttt gtcctttgga cacacttgcc ttgttggacg caaaaagatt 3780 ttattttctt tttactgctt ttgtagatta c 3811 //