ID GQ353374; SV 1; linear; genomic RNA; STD; VRL; 3633 BP. XX AC GQ353374; XX DT 02-AUG-2010 (Rel. 105, Created) DT 02-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Sweet potato mild mottle virus isolate 130 polyprotein gene, partial cds. XX KW . XX OS Sweet potato mild mottle virus OC Viruses; Riboviria; Potyviridae; Ipomovirus. XX RN [1] RP 1-3633 RX DOI; 10.1371/journal.ppat.1000996. RX PUBMED; 20657820. RA Giner A., Lakatos L., Garcia-Chapa M., Lopez-Moya J.J., Burgyan J.; RT "Viral protein inhibits RISC activity by argonaute binding through RT conserved WG/GW motifs"; RL PLoS Pathog. 6(7):e1000996-e1000996(2010). XX RN [2] RP 1-3633 RA Giner A., Garcia-Chapa M., Tairo F., Lopez-Moya J.J.; RT ; RL Submitted (03-JUL-2009) to the INSDC. RL Department of Plant Molecular Genetics, Centre for Research in Agricultural RL Genomics CRAG, CSIC-IRTA-UAB, Jordi Girona, 18-26, Barcelona 08034, Spain XX DR MD5; bcb437b6fcdaa0f8959d808b1f4157ad. DR EuropePMC; PMC2904775; 20657820. XX FH Key Location/Qualifiers FH FT source 1..3633 FT /organism="Sweet potato mild mottle virus" FT /isolate="130" FT /mol_type="genomic RNA" FT /country="Tanzania" FT /isolation_source="Ipomea sp." FT /db_xref="taxon:41459" FT CDS 1..>3633 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E2CV60" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR025910" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:E2CV60" FT /protein_id="ADI24117.1" FT /translation="MGKSKLTYKQCIAKWGKAALEAQNNGSKRSVTVGTHQIAANIFAF FT YDAKDYHLFAMGKRGGLTPAAEQLRIAIERGTIYKVQYDCHFCPDCDAIVDSDEGWYCE FT DCGSQFNKRDDNVLDNKNDVARALGGWTEYEDATWASFEAAKADMLEVAPTVGQLEKEI FT RAIEKSAGKRLTAYEEEMLEELAYKLDVAKMNEEKQETVFEETVFSISNDEFPALEGPQ FT AEAVNETIEKPNEENAIEIASEVEKTVESESTNGITDEQINDATDAHVVVTPVVASSAT FT NFGTATNKEKLVEKPKAVMWVTKTKIPAVVPAMPSKSAVWVAKPRLAPALPIVESVAKP FT TVQACGSVINIGAMVCPITVAAIESHSHQNEKLNESLNAQVDDTTKEEAPVVKYNITFG FT SFNYEVSAKGEQVQAAVKLDEMIEGPDIEPILICQTGSSHKHETKKAAKGLFVQDRFSV FT IGNKVLCKSFPAFKNFMNETRLGGIYRTRKGSYKNAALRLLKATKVQVFYDGIKDIFEC FT PYCHVSSNELEGLNGDNCEKCKDLFYKHIEDPRKVEEEYLMVPLVPIDQHVHEEHSIIS FT KAKWEAHESICEGEVNVIKVFDGKPTASKKKFKTKQASNVANIPLDDFMQELVEICLER FT NTPIEIIGGVKSFNVVKLRHTTRDISKSGEDDMYPTEREWFCHENKLCLCGRIDREKKI FT RSFEVRPGWSGVTLHRNQVAECDWSKFVLIDDICVVQGRNLITNKIENALEKKGASKLK FT QIQFYASSVVPNFKDEFDRASRLKADHEPDESSNNELIGRLAKLVAAVIPKGHLYCKTC FT CFRVIKSKRVDIVNALNKAKQRGERDEFIYDELIKLFDLQAPPPYKIAAITNNGDMLRT FT LGLGGDQYSGRLSLIMQHLQGLHASISMLHQSLAGAQNDQQIDRQSLHNQVRILHQRNE FT EHMPILKKAVDEIQLLNATDQVANARELYLDTRATSTGDFDILRKYQSICEFFPNIMSR FT ANKVGMAVIKSGTSLSKAFALMNSAKSMDAIHTLIGEDVIEHVDGACLLKNDKTFFSIG FT CKQGVDGSKMYGPLCPTKQHVRIHRVESNMQIPLPTFHEATVWEFNEGYCYANQFALMV FT GFINEDEMEFYKNQMNQVVLNLGAWPTFEQYLIELRAISLDYPKVRGCPAAIHLVSHVS FT KLIHVLGQFGTINQGWHALEVATVGELVDLCHKKVEGEMLTYKVG" FT mat_peptide 1..2274 FT /product="P1 protein" FT mat_peptide 2275..>3633 FT /product="HC-Pro protein" XX SQ Sequence 3633 BP; 1157 A; 648 C; 899 G; 929 T; 0 other; atggggaaat ccaaactcac ttacaaacaa tgcattgcta agtggggaaa agccgcactt 60 gaagcgcaaa acaatggatc aaaaaggagt gtcactgttg gaactcacca gatagcggcc 120 aatatttttg cgttttatga cgcaaaagat taccatctgt ttgccatggg caaaagaggt 180 ggactgactc cagcagctga gcagttgaga attgctatcg agcggggaac tatttacaag 240 gtgcagtatg actgccactt ctgtcctgat tgcgacgcga ttgtcgactc tgatgaggga 300 tggtattgtg aggattgcgg ttcgcaattc aacaagcgcg acgataatgt acttgataac 360 aaaaatgatg tcgcacgcgc tcttggtggg tggactgaat atgaagatgc cacttgggcg 420 tcatttgagg ctgctaaggc tgatatgctt gaagtagcac caaccgtggg acaacttgag 480 aaagagatca gagccataga aaagtcagct ggcaaaagac tcactgctta tgaagaagaa 540 atgctggagg agttggcata caaacttgac gtggccaaga tgaacgagga aaaacaggag 600 acggtttttg aggaaactgt tttctcaatt tccaatgacg aatttccggc gcttgagggg 660 ccacaagctg aagcagtcaa cgaaaccatt gagaaaccta atgaggaaaa cgcgattgaa 720 atcgcgagtg aggttgaaaa aactgtggag tctgaatcca ctaatgggat tactgatgag 780 caaattaatg atgctactga tgcgcatgta gttgtgacgc ctgtcgtggc ttcaagtgca 840 acaaacttcg ggacggcaac caacaaggag aagttggttg aaaaaccaaa agcagttatg 900 tgggttacaa agacaaaaat tcctgctgta gttcctgcta tgccatctaa gtcggctgtc 960 tgggttgcca agcccaggct agcacctgca cttcctattg ttgaatcagt tgctaagcca 1020 acagtgcaag cttgcggtag tgtgattaac ataggcgcta tggtgtgtcc catcacggtg 1080 gcagcaattg aatcacacag ccatcaaaat gagaagctca atgaatcctt aaacgcacaa 1140 gttgatgata caacgaaaga agaggcacca gtggtcaaat acaatataac ttttggttca 1200 ttcaattatg aggtgagcgc gaaaggggag caagtgcaag ctgccgtcaa acttgatgag 1260 atgatagaag gacctgatat tgaacctatt ctgatttgcc aaacaggaag ttcccacaaa 1320 catgaaacca agaaagcggc aaaaggtctt tttgtccagg atagattttc agtgattggg 1380 aataaggtct tgtgcaagtc ctttcctgcc ttcaaaaatt tcatgaatga gacaaggttg 1440 ggagggattt atagaacaag aaaaggaagt tacaaaaacg ctgcattgcg tttattgaag 1500 gctactaaag ttcaggtgtt ttatgatggg ataaaggaca tttttgaatg tccgtattgc 1560 cacgtgagca gtaatgagct agaaggcctt aatggagata attgcgaaaa atgcaaggat 1620 ctattttaca aacacatcga agacccgaga aaggttgagg aggaatatct tatggttccc 1680 ctcgtgccta tcgatcagca tgttcatgaa gaacatagca tcatcagtaa ggctaaatgg 1740 gaagcgcacg aatccatttg tgaaggagag gtgaatgtta tcaaggtttt tgatggcaaa 1800 ccaactgcaa gcaagaagaa attcaaaact aagcaagctt caaatgttgc aaatatacca 1860 ctcgatgatt ttatgcaaga gctagttgaa atttgtcttg agagaaacac ccctattgaa 1920 attattgggg gcgtaaaatc tttcaatgtg gttaagttaa ggcacactac gagagatatt 1980 agcaagtctg gtgaggatga catgtatcca actgaaaggg agtggttctg ccacgagaat 2040 aagctgtgtt tgtgtggtag gattgatcgt gagaagaaaa tcagaagttt cgaggtgcgc 2100 ccaggttgga gtggagtgac cttacatagg aatcaagtgg cggaatgtga ttggagcaag 2160 tttgttctca ttgatgacat atgcgtggtg caaggtagaa acttgattac gaacaagatt 2220 gagaacgcac ttgaaaagaa aggggctagt aaacttaaac agatacaatt ctatgcaagt 2280 tctgttgtac ccaatttcaa ggacgaattt gacagagcca gccggctaaa agccgatcat 2340 gagccggatg agtcgtctaa caacgaactt attggtaggt tggccaagct tgttgcagca 2400 gtcattccaa aaggccacct atactgtaaa acatgctgtt ttagggttat caagagcaaa 2460 cgtgtagaca tagttaatgc attgaataaa gctaagcagc gtggcgagcg agatgagttc 2520 atttatgatg agcttattaa actttttgat ctacaagcac caccaccata taagattgca 2580 gcaataacca acaatggtga tatgttgcga acattaggat tgggtggaga ccaatatagt 2640 gggcgactga gcctcataat gcaacatttg caaggattgc atgcgtcgat atcaatgctt 2700 caccaatcgc ttgcaggagc ccaaaatgac cagcaaattg acaggcaatc gcttcataac 2760 caagtacgga tcttacacca gagaaatgaa gagcatatgc ctattctaaa gaaggcggtt 2820 gatgaaattc agttattaaa tgcaacagat caggtcgcta acgctcggga attgtacttg 2880 gacactagag caactagtac tggagatttt gatattttac ggaaatatca gagtatatgt 2940 gagttctttc caaatatcat gagccgagct aataaagtag ggatggcagt cattaaatct 3000 ggaacatcat tgagcaaagc ttttgccctt atgaacagtg ctaagtcgat ggatgctatt 3060 catacgctta taggggaaga cgtcatagaa catgttgatg gagcttgctt gctaaagaat 3120 gacaagacat ttttctcaat tggttgcaag caaggtgttg atggaagcaa gatgtatggc 3180 ccactttgtc cgaccaaaca gcatgtaaga atccaccgag ttgaatctaa catgcaaatt 3240 cctttaccaa cattccacga agcaacagtc tgggaattta atgaaggtta ttgctacgct 3300 aatcaattcg ctctgatggt tggttttatc aatgaggatg aaatggaatt ttataagaat 3360 caaatgaacc aagttgtgtt gaacttagga gcttggccga cctttgagca atatttaatt 3420 gagctgcgag caatctcact tgattatcct aaagttaggg ggtgtccagc agcaatccat 3480 ttagtttccc atgttagcaa gcttatccat gttttgggac aatttggaac aataaatcaa 3540 gggtggcatg cgctcgaagt ggcaactgta ggtgaactcg tggacttgtg ccataagaaa 3600 gttgaaggtg agatgttaac ctataaggtt ggt 3633 //