ID GQ338767; SV 1; circular; genomic DNA; STD; VRL; 2735 BP. XX AC GQ338767; XX DT 29-JUL-2009 (Rel. 101, Created) DT 29-JUL-2009 (Rel. 101, Last updated, Version 1) XX DE Tomato leaf curl Vietnam virus isolate Hanoi 103 segment DNA A, complete DE sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2735 RA Thanh T.N., Vinh D.N., Mukheerjee S.M.; RT ; RL Submitted (29-JUN-2009) to the INSDC. RL Plant Molecular Biology, International Centre For Genetic Engineering and RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; 71be6d780fb25d58709dd4eb726a59b9. XX FH Key Location/Qualifiers FH FT source 1..2735 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA A" FT /host="tomato" FT /isolate="Hanoi 103" FT /mol_type="genomic DNA" FT /country="Viet Nam:Tu Liem, Hanoi" FT /collection_date="12-Jul-2007" FT /db_xref="taxon:208177" FT gene 130..480 FT /gene="AV2" FT CDS 130..480 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:C7F8J0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C7F8J0" FT /protein_id="ACT79071.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRSKDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PQAQDIQNVQKP" FT gene 290..1063 FT /gene="AV1" FT CDS 290..1063 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C7F8J1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C7F8J1" FT /protein_id="ACT79072.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYANRAVAPTVLVTNKRRSW FT VNRPMYRKPKIYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1060..1464) FT /gene="AC3" FT CDS complement(1060..1464) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:C7F8J2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C7F8J2" FT /protein_id="ACT79073.1" FT /translation="MDSRTGEPITATQAENGVFTWEITNPLYFKITELQNRPFLSNNDI FT VTVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWEALTQTTFVNSSHVINYNLY" FT gene complement(1205..1612) FT /gene="AC2" FT CDS complement(1205..1612) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="suppressor" FT /db_xref="GOA:C7F8J3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C7F8J3" FT /protein_id="ACT79074.1" FT /translation="MQSSSASPNRCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSAL FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQTLPVEQRHSDSQDPIQLQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT gene complement(1512..2597) FT /gene="AC1" FT CDS complement(1512..2597) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:C7F8J4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C7F8J4" FT /protein_id="ACT79075.1" FT /translation="MAPPNKFRINAKNIPPYPHCSLTKEEALSQLKNLETPVNKLFIRI FT CREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKAYMD FT KDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFHN FT LNSNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGDS FT RTGKTMWARSLGPHNNLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAVFVSITEPLY FT SSTYQSPAQDSEEENNQETED" FT gene complement(2150..2443) FT /gene="AC4" FT CDS complement(2150..2443) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C7F8J5" FT /protein_id="ACT79076.1" FT /translation="MELLTCMYSSNSKGNSSVKTKDSSISHPQAGQHISIRTFRQLKAQ FT QMSKPIWTKTETCLIMEFSKSMEDQLEEVASLQTTHMPRQSIQGPKHRPSIY" XX SQ Sequence 2735 BP; 724 A; 564 C; 607 G; 840 T; 0 other; accggatggc cgcgattttt tttagtggtc ccccccacta tcatttgtcg gccaatgtag 60 acgctccctc agagcttatt tgtgtaacgg ccccctataa aacttggtcc ccaagtactc 120 attccaaaca tgtgggatcc gcttttaaac gagtttcccg aaaccgttca cggttttagg 180 tgtatgctag cgattaaata tttgcaatta gtagaaaata catactctcc cgatacatta 240 gggtacgatt taatacgtga tttaatttta gtcattcgtt ccaaggatta tgtcgaagcg 300 tcccgcagat atagtcattt ccactcccgc atccaaggtg cgtcgccggc tgaacttcga 360 cagcccgtat gccaaccgtg ctgttgcccc cactgtcctc gtcacaaaca aaaggaggtc 420 atgggtgaat cggcccatgt accgcaagcc caagatatac agaatgtaca aaagccctga 480 tgttccacga ggatgtgaag gcccatgtaa agtccagtct tatgaacagc gtcatgatgt 540 agcccatgta gggaaggtaa tttgtgtgtc tgatgttaca cgtggtaacg gtttgactca 600 tcgtgttggt aagaggttct gtattaagtc agtttatgtt ttgggtaaga tctggatgga 660 tgagaacatt aagacgaaga atcatactaa tacggtcatg ttctttttag tacgtgatag 720 aagacctttt ggaactcccc aagattttgg tcaggtgttt aacatgtatg ataacgagcc 780 aagtacagcc acggtgaaga acgataacag agatcgtttt caagtccttc gtcgatttca 840 ggcaactgtt actggtggtc agtatgcaag caaggagcaa gcaatagtta ggaagtttat 900 gaaggtgaac aaccatgtga cgtataatca tcaagaggct gcgaagtatg ataaccacac 960 agagaatgct ctgttattgt atatggcatg tactcatgct agtaacccag tgtatgctac 1020 gttaaaaatc aggatctatt tctatgattc tgttcagaat taataaagat tatagtttat 1080 tacatgagaa ctgtttacaa atgttgtttg cgttaatgct tcccataata cataatttac 1140 tgctctaatt acattattca aactaattac acccaaatta ttgagaaact tcaaaacttg 1200 tgtcctaaat actcttaaga aacgaccagt ctgaaggtgt gagttcgtcc atatccggaa 1260 gtccagaaaa cattggtgca tccccagtgc tttcctcagg ttgtagttga attggatcct 1320 gactgtcact atgtcgttgt tcgacaggaa gggtctgttt tgtagttccg ttatcttgaa 1380 atacagggga tttgttatct cccaggtaaa aacgccattc tctgcctgag ttgcagtgat 1440 gggttcccct gtgcgtgaat ccatggttgg cgcagttaag tgcgctgaaa taagaacaac 1500 cacagggaag atcaatcctc cgtctcctgg ttattttctt cttcgctatc ctgtgctgga 1560 ctttgatagg tacttgagta cagcggttcg gtgatgctga cgaagactgc attctttatt 1620 gcccacgact ttaatgcagt attcttttcc tcgtctaggt attctttata gcttgagttg 1680 ggccctggat tgcacaggaa gatagctgga atgccacctt taatttgaac cggtttgccg 1740 tactttgtgt tgctttgcca gtccctttgg gcccccatga attctttaaa atgctttagg 1800 tagtgcggat caacgtcatc gatgacgttg aaccaggcat cattactgta cacctttgga 1860 ctcaaatcaa gatgaccaca cagattattg tgtggaccca atgatcgagc ccacatcgtc 1920 ttccccgtcc tgctatcacc ctctatgact atacttattg gtcgtaatgg ccgcgcagcg 1980 gaactgacga cgttctctgc agcccactct tcgagttcct ctggtactcg atcaaacgaa 2040 gaagaagaaa aaggcgaaac gtaaacctcc attggaggag taaaaatcct atctaaatta 2100 ctatttaaat tatggaattg taaaacaaaa tctttgggag ctttctccct taatatattg 2160 agggccgatg ctttggaccc tgaattgatt gcctcggcat atgcgtcgtt tgcagactgg 2220 caacctcctc tagctgatct tccatcgatt tggaaaactc catgatcaag cacgtctccg 2280 tctttgtcca tataggcttt gacatctgtt gagcttttag ctgcctgaat gttcggatgg 2340 aaatgtgctg acctgcttgg ggatgtgaga tcgaagaatc tttggttttt acactggaat 2400 ttcccttcga attggatgag tacatgcagg tgaggagttc catcttcgtg gaattctctg 2460 cagatgcgga taaatagttt atttaccggt gtttctaggt ttttaagttg ggaaagtgct 2520 tcttctttag tgagagagca gtgtggatat ggaggaatat ttttggcatt tattctgaat 2580 ttattaggag gagccatgac tggtcatcgg tgtctcacaa acttggctat gcaattgtgt 2640 ctggtgtctt attatatgtg gacaccaaat ggcatatcgt aattccaaaa gaaattcaaa 2700 attcaaattg gtaaagcggc catccgtata atatt 2735 //