ID GQ338766; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC GQ338766; XX DT 29-JUL-2009 (Rel. 101, Created) DT 29-JUL-2009 (Rel. 101, Last updated, Version 1) XX DE Tomato leaf curl Vietnam virus isolate Hung Yen segment DNA A, complete DE sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Thanh T.N., Vinh D.N., Mukheerjee S.M.; RT ; RL Submitted (29-JUN-2009) to the INSDC. RL Plant Molecular Biology, International Centre For Genetic Engineering and RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; d643292360f89efeb3e1e1eaca1d6089. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA A" FT /host="tomato" FT /isolate="Hung Yen" FT /mol_type="genomic DNA" FT /country="Viet Nam:Khoai Chau, Hung Yen" FT /collection_date="12-Jan-2008" FT /db_xref="taxon:208177" FT gene 132..482 FT /gene="AV2" FT CDS 132..482 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:C7F8I4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C7F8I4" FT /protein_id="ACT79065.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLLRDL FT ISVIRAKDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PKAQDVQNVQKP" FT gene 292..1065 FT /gene="AV1" FT CDS 292..1065 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C7F8I5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C7F8I5" FT /protein_id="ACT79066.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYASRAAAPTVLVTNKRRSW FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVVHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNIHVTYNHQEAAKYDN FT PPENALLLYMACTHASHLVYATLKIRIYFYDSVQN" FT gene complement(1062..1466) FT /gene="AC3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:C7F8I6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C7F8I6" FT /protein_id="ACT79067.1" FT /translation="MDSRTGEAITATQAESGVYIWTVKNPLYFKIISHDERPFLMNNDI FT ITIQVQFNYNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRACDHVLWDVLEKTEFVTLPNIIKFILY" FT gene complement(1207..1611) FT /gene="AC2" FT CDS complement(1207..1611) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="suppressor" FT /db_xref="GOA:C7F8I7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C7F8I7" FT /protein_id="ACT79068.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRNAKKATRRRRVDLPCGCSYFIALG FT CHNHGFSHRGSYHCNSSREWRIYLDGQKSPIFQDNQPRRETISDEQRHHHNTSPIQLQP FT EESVGNTPMFSNLPDLDSFTSSDLAFLKSI" FT gene complement(1514..2599) FT /gene="AC1" FT CDS complement(1514..2599) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:C7F8I8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C7F8I8" FT /protein_id="ACT79069.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLISPSRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGLFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH FT NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKIWAIKNAIFVTLQGAL FT YSGSYQSATPQRQESNEETES" FT gene complement(2149..2442) FT /gene="AC4" FT CDS complement(2149..2442) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C7F8I9" FT /protein_id="ACT79070.1" FT /translation="MELLTCMFSSNSKGNSNVKTKDSSISYPQAGQHISIRTFRQLKAQ FT QMSSPIWTKTETCLIMDFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2743 BP; 742 A; 542 C; 608 G; 851 T; 0 other; accggatggc cgcgattttt tttacatggt ccccaccact aacaaatgtc ctccacttag 60 aacgctccct caaagcctat ttaattcaaa tccattatat atacttggtc cccaagtact 120 cactttaaaa tatgtgggat cctttactga atgagtttcc cgaaaccgta cacggtttta 180 ggtgtatgtt agcgattaaa tatttgcaat tagtagaaaa tacatactct cctgatacat 240 tagggtacga tttgcttcgt gatttaattt cagttattcg tgctaaggac tatgtcgaag 300 cgtcccgcag atatagtcat ttccactccc gcatccaagg tgcgtcgccg gctgaatttc 360 gacagcccgt atgccagccg tgctgctgcc cccactgtcc tcgtcacaaa caaaaggagg 420 tcatgggtga atcggcccat gtaccgaaag cccaggatgt acagaatgta caaaagccct 480 gatgttcctc gaggatgtga aggcccatgt aaggttcagt cctatgaaca gcgtcatgat 540 gtagtgcacg taggtaaagt catttgtgtg tcggatgtta ctcgtggtaa cgggttgact 600 catcgagtgg gaaagaggtt ttgtgttaag tctgtttatg ttttgggcaa gatatggatg 660 gatgagaaca ttaagaccaa gaatcatact aatactgtga tgtttttttt agtgcgtgat 720 aggagaccat ttgggactcc acaggatttt ggtcaggtgt ttaacatgta tgataacgag 780 ccaagtacag ccacggtgaa gaacgacaac agagatcgct ttcaagttct acggcgtttt 840 caggctactg ttactggtgg tcagtatgca agtaaggagc aagcaatagt taggaagttt 900 atgaaggtga acatccatgt gacgtataat catcaagaag ctgcgaagta tgacaatcca 960 ccagagaatg ctcttttgtt gtatatggca tgtacccatg ctagtcatct ggtgtatgct 1020 acattgaaaa tcagaatcta tttctatgat tctgttcaga attaataaag gatgaatttt 1080 attatatttg gaagtgttac aaattctgtt ttttccaata catcccataa tacatgatca 1140 catgctctaa ttacattgtt aatactaatt acacccaaat tatctaaata tttcatacat 1200 tgaaccctaa atactcttaa gaaacgccaa gtctgaggac gtaaacgagt ccagatctgg 1260 aagattagaa aacattggtg tattcccaac gctttcctca ggttgtaatt gaattggact 1320 tgtattgtga tgatgtcgtt gttcatcaga aatggtctct cgtcgtggct gattatcttg 1380 aaatataggg gatttttgac cgtccagata tatacgccac tctctgcttg agttgcagtg 1440 atagcttccc ctgtgcgaga atccatgatt gtgacagcct agtgcaatga agtatgaaca 1500 gccacaaggg agatcaactc tccgtctcct cgttgctttc ttggcgttgc ggtgttgcac 1560 tttgatagga acctgagtag agtgcgcctt ggagggtgac gaagatcgca ttttttattg 1620 cccagatttt aagtgcgctg ttcttatctt cgtccaagaa ttctttatag cttgaattgg 1680 ggccgggatt gcagaggaag atagtgggaa ttcccccttt aatttgaacg ggttttccgt 1740 actttgtgtt gctttgccag tccctttggg cccccatgaa ttctttaaaa tgctttaggt 1800 agtgcggatc gacgtcatca atgacgttgt accaggcatc attattgtat accttcggac 1860 ttaaatcaag atgaccacac aaataattat gtggtcctaa tgacctagcc cacatcgtct 1920 ttcccgtccg actatcgcct tcgataacta tacttatcgg tcttaaaggc cgcgcagcgg 1980 cactgacaac gttctctgca gcccactctt cgagttcctc tggaactcga tcaaaggaag 2040 aagaagaaaa aggcgaaaca taaacctcca ttggaggagt aaaaatccta tctaaattat 2100 tatttaaatt atgaaactgt aaaacataat ctttaggtgc cttttccctt agtatattga 2160 gggccgaagc tttggaccct gaattgattg cctcggcata tgcgtcgttg gcagattggc 2220 aacctcctct agccgatctt ccatcgatct ggaaaagtcc atgatcaagc acgtctccgt 2280 ctttgtccat ataggacttg acatctgttg agcttttagc tgcctgaatg ttcggatgga 2340 aatgtgctga cctgcttggg gatatgagat cgaagaatct ttggttttta cattggaatt 2400 tcccttcgaa ttggatgaga acatgcaggt gaggagttcc atcttcgtgg aattctctgc 2460 agatgcggat aaatagttta tttactgggg tttctaggtt tttaagttgg gaaagtgctt 2520 cttctttagt gagagagcag tgtggatatg tgaggaaata atttttggca tttattctga 2580 atttattagg aggagccatt gactggtcaa tcggtgtctc ataaacttgg ctatgcaatt 2640 ggtgtctggt gtcttattta tatgtggaca ccaaatggca ttatcgtaat tcccaaaaga 2700 aattcaaaat tcaaattggt aaagcggcca tccgtataat att 2743 //