ID GQ336991; SV 1; linear; genomic RNA; STD; VRL; 8778 BP. XX AC GQ336991; XX DT 18-AUG-2009 (Rel. 101, Created) DT 18-AUG-2009 (Rel. 101, Last updated, Version 1) XX DE Impatiens necrotic spot virus segment L, complete sequence. XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-8778 RA Cheng X.F., Dong J.H., Zhang Z.K.; RT "Molecular Characterization of Phalaenopsis Isolate of Impatiens Necrotic RT Spot Virus from Yunnan"; RL Unpublished. XX RN [2] RP 1-8778 RA Cheng X.F., Dong J.H., Zhang Z.K.; RT ; RL Submitted (30-JUN-2009) to the INSDC. RL Biotechnology and Genetic Germplasm Institute, Yunnan Academy of RL Agricultural Sciences, No. 9 Xueyun Road, Kunming, Yunnan Province 650223, RL China XX DR MD5; 2f2430bdc6e614ea94bd136e9db6d3ec. DR EuropePMC; PMC5946465; 29747679. XX FH Key Location/Qualifiers FH FT source 1..8778 FT /organism="Impatiens necrotic spot virus" FT /segment="L" FT /host="Phalaenopsis amabilis" FT /isolate="Phalaenopsis" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="06-Jun-2006" FT /db_xref="taxon:11612" FT CDS complement(150..8747) FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="RdRP" FT /db_xref="GOA:C7F6X2" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR015841" FT /db_xref="UniProtKB/TrEMBL:C7F6X2" FT /protein_id="ACU33931.1" FT /translation="MNNYKARLLIENSVTLLSSIDDCIKSNLELSRDLHKKNPDEITED FT IIINNNAKNYEALRTLIARITRDGEGIETGLATVDMKKISEDMTLLEQKYLETELARHD FT MFGELVSRHLHLKPKKRHDVEIEHAVREYFEELSKKECSNRLSEEDFKKVSKEYVATNA FT TPDNFVIYKESKSGPLCMMIYDWKISVDAKTETKTTEKCYKNIWKSLKDVKVKGKSFLE FT EHPIFISIVILKPIGSMPIVVTTSRVLGKFEDSESALHANRLRHASQSRLVGVSNIGQI FT IGTTPTVVREFYADTQKLKIEFRSILGEEFGSKDIFFSHWTNKYKDRDPTQIAHSEDLE FT KIIESMVTDDVSREEIVHFMFGNFCLHIETMDDQHIADRFNGYRSSCVNLNVEPKKDIS FT ELKDHLLSTKGLWESLYDHHLIKVMDRIKMKKQKEKIIPDIMTAFNLNAEEYEKKYPNC FT FTSDLSETKTNFSVTWSPCTDMVELGNQDYNNAVIDRFRKAFLSNPRIRYNSAYSKEMN FT VTSKAKDVTELVRSCLTTLSCDTSGMDSQQLEDEIDISTGGIKVERTSKSQEWIKKNDC FT LTRNRNEFNMRETSKDNKVIYFKGLSVMNVSMSKKKRIIKHEELKEKITKGLEYDTSER FT QYDPNDDYVSLDLSSFTHAKKLIRHDNEESLEWCSQIQDGLFVLHNSDIRENCKVATVY FT NNYTKNPENLFTQSTIIKTEMETCKKINKLCNDLAIYNYAEDMMQISKGLMVADRYMTK FT ESFKILTTSNTSMLVLAFKGDGLNTGGSGVPYILVHMVEETLSEQFSVCYTKEIYSHFS FT FGSHVVYIMRPQRLNQVRLLSLFKSPSKVPVCFAQFSKKAHELEGWLKIKDMQEVQTLS FT MSSNVRRIMRNIVFSSVMIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIQDKFDPD FT ITNVADMFFVEGIKKLLLKMENLNLSTSAKPVVIDHENDVIGGITNLNIKCTITGATLK FT TLEDLYNNVYLAIYMMPKSLHNHFHNLTSLLNVPAEWELKFRKEMGFTLFEDIYPKQKM FT FQDNELFSINGVLNLKSLSDYYASTVENVGLMRTEIENKEDFLSPCYKISTLKSSKKCS FT QSNIICSDDIINCLQEVNVRLLEDLSPKNLAILKGLLRTLHEDKNRLYEFFEDHSENPY FT YLMEKMKTIKSSEKITTGKSKTSKFIRNNHPLTVETYLKTKLYYRNNITVLKSKKVSEE FT LYDLIKQYHNIMDIDMESIMNLGKGLEGKKHTFLQMLEFVMSKAKNASDAIDFLVSVFE FT KMQRTKTDREIYLMSMKVKMMLYFIEHTFRHVAQSDPSEAISISGDNKIRALSMLSMDT FT ITSYNDILKNSKNKSKLAFLSADQSKWSASDLTYKYILAIIMNPILTSGECTLMVDCLM FT MYVKLKKVCIPTDIFLGLRNSQEKFGTNETAIGLLTKGLSTNSYPVSMNWLQGNLNYLS FT SVYHSCAMKAYHRMLESYKKCEFQTRWIVHSDDNATSLIADGDIDQMLTDFSSKSLSEM FT VFRSIESHFKSFCITLNPKKSYASSSEVEFISERIVNGAIIPLYCRHLANCCTESSHIS FT YFDDLMSLSINVTMLLRKGCPNEVIPFSYGAVQTQALSIYSMLPGEINDTMRICKKAGV FT NLEHNEIPTNLGGWLTANVESLSLLGPSSNDQTIYYNIIRDFLKKDDFEQVKQSTSSER FT FLDLRFEELKQKKEKDKLELNDKKMIFLMNLFEQSSVSEDSDVLNIGMKFQTMMTQIIR FT LPQFINENALSKMSSYNDFCKLYPHLRKNQQLHNSTKEIKSDEDMLIEDLDDYEKIAPA FT NEMEEVHEIMIKNPETILIAPLNDRDFLLSQLFLYTSPAKRNQLSSQSTEKLALDRILR FT SKARTFINPDSDTKMTYDENLERKISTMKTLNEDSVSVFKTCINLVLKDVNFAMAIPII FT DNIYPCEARRRDNYNFRWFQTEKWIPVVEGSPGLVVMYSIYGSDYIEKLGLKNIPLTDN FT SMVVLTSTFGSSLMLEDVKYYVKGLEVFETEEFQNSNSCQRAVKACNYMITAQNRLLAI FT NTCFSRKNFPFYSKFNLGRGFVSNTLALMSSIYSKEESFHFMSNVHFKIDKSIRAIINA FT QQDLNLERVLDTAVYISDKIQAIFPDITRFDIMTILKNVCIDSVSIWDTLDSKMDKINH FT AMERKMTTSNILLSHNSELNTIQKQIIWLYNMGLCSKKTLNFVIRYIRRSDVRYVRTEE FT QDSFGNYVSGTVYKIGIMNQNNYVQLMASETDIAISLRTPYDIRDERDVLYSAHKDSIE FT KLLSKFLFDKGNVIRSKQSQTVFLNPGQACLRTTTDGKLIAKVNPTPRLLKVDNVKLIM FT DIDYENVNSDVWSIIESQKQIDLRLPETGECYSEMYKTIDSEQGLIYEMKSNLIKSLTF FT INTFADLNESVYSIDDEVTRETIFDFIDSIRNDCLEGLETCKNVEEYEEFLDTHGFRET FT VSLFKNMIESLESLDAEYSPIFLNITDKYQKFSEDLGNFKSMLLMLKYSLVNDASGFKS FT YRATGAHAIDLTMKKHIEIGEFNLLGLIQLTNACESCHNSDSILNLVSLRNVLSKTYTI FT SSRKIQLYYDINLQNDLMERSYDFKTLVLPDINLSDYSKEILKENGFVVSGENIKIDRE FT IGDEDFVGLASFDVMRLDEEQMYDEIVKDMKIKRKKKGYLFPSNTLILSEMIKFLINGI FT KGTSFDVESLLRNSFNVTIFAGSRLGKVSTSVPSLKIYSTVFMEYEKSNCPLNEISECL FT EGFLKITKSEISEPILEGKLKKVLIQLRNEKNKSKKLEVFRAIYGFLSNNPLCLTDKTL FT YGRMTFEDINRYIVETREIIINKIKELDDGDSSDSIEVLLNYLNEAN" XX SQ Sequence 8778 BP; 2606 A; 1640 C; 1249 G; 3283 T; 0 other; agagcaatca ggcacaacta aaatcttaat ctaaccatac taaatatata aaaactaata 60 ttaagatcaa aattatggca ctatttgctc tttcagttgt atggctactt atgctagatg 120 ttcatgtaaa aatatttttg gttcttattt tagtttgctt cattcaaata attcaaaagt 180 acttctatgc tgtctgaaga atcaccatca tcaagttctt tgattttatt tataattatt 240 tctctagttt ccacgatgta tctgttgata tcttcaaatg tcattctacc atataatgtt 300 ttgtctgtca agcataaagg gttatttgat aaaaacccat atattgctct gaagacttcc 360 aatttcttgc tcttgttttt ttcatttctt aattgaatca aaaccttctt taattttccc 420 tcaagtatag gttcagaaat ctctgatttg gttattttta aaaatccttc caggcactct 480 gatatctcat tcaaaggaca attgcttttc tcatattcca tgaaaactgt tgaatagatc 540 ttcaaagaag gaacactagt gcttactttc cctaatctgc tcccggcaaa aatagtcaca 600 ttgaaactgt ttctaagcaa actctctaca tcaaaactag ttccttttat tccatttatc 660 aagaatttta tcatttcgct aagtatgaga gtgttagaag gaaacaaata tcctttcttt 720 tttcttttta ttttcatatc tttcactatt tcatcataca tttgctcttc atccaatctc 780 atgacatcaa agctagctag accaacaaaa tcttcatcac caatctctct atctattttt 840 atgttctcac cagaaacaac aaaaccattt tctttcagta tttcctttga ataatcagac 900 agattaatat ctggtaaaac caatgtcttg aaatcataac tcctctccat caaatcgttc 960 tgtaagttta tatcataata tagttggatt ttcctactag aaatggtata tgttttgctt 1020 agaacatttc tcaagctcac tagattcaat atagaatcac tattatggca agactcgcaa 1080 gcattggtca actgtatcaa gcctaataag ttgaattctc ctatctctat atgttttttc 1140 attgttaaat caattgcatg tgcaccagta gctctgtaac ttttgaagcc agaagcatca 1200 ttcactagag aatacttcaa catcaacaac attgacttga aatttcctaa atcctcggag 1260 aatttttgat acttgtcagt tatattcaag aatatagggc tatattcagc atccaatgac 1320 tctaagctct ctatcatgtt tttaaaaagg ctaacagttt ctctaaaccc gtgggtgtcc 1380 aaaaattctt catactcttc aacatttttg caagtttcta aaccttctag acaatcattc 1440 cttatactat ctatgaaatc aaaaatggtt tctcttgtga cttcatcatc tatagaataa 1500 acagattcgt tcagatctgc aaatgtgttt ataaaagtca atgacttaat caaattagat 1560 ttcatttcat aaatcaaacc ctgctccgaa tcaattgttt tatacatttc agagtaacat 1620 tcacctgttt ctggaagtct taaatcaatt tgtttttgac tctctattat ggaccaaaca 1680 tcagagttca cattttcata atcgatgtcc attattagtt ttacattgtc aactttcagc 1740 aatctaggag tcggatttac ttttgcaata agcttaccat cagttgttgt tcttaaacaa 1800 gcttggcctg ggtttaggaa aactgtttgg ctctgtttgg atcgtatcac attacctttg 1860 tcaaacaaaa attttgataa aagtttctca atgctatctt tatgagcact gtatagcaca 1920 tccctttcat ctcttatatc atatggtgtt ctcaaagaga ttgcaatatc tgtttcagaa 1980 gccatcagtt gtacataatt attttggttc atgatgccaa tcttataaac tgtccccgaa 2040 acatagtttc caaaactgtc ttgttcttct gtcctaacat atctgacatc acttcttctt 2100 atatatctta taacaaagtt cagtgtcttt ttagaacata gacccatatt atacaaccaa 2160 attatttgtt tctgaattgt gtttaattca ctgttatggg acagaagaat gttagatgta 2220 gtcattttcc tttccatagc atgatttatt ttatccattt ttgaatctaa tgtatcccaa 2280 atggaaacac tgtcaatgca aacatttttc aaaatagtca tgatgtcaaa tctagttatg 2340 tctgggaaaa tagcttgtat cttatcagaa atgtacacag cagtgtccaa aactctctcc 2400 aaatttagat cttgttgtgc atttattata gctcttatag atttgtctat tttaaaatgc 2460 acatttgaca taaaatgaaa tgattcttct ttactgtaaa tgcttgacat taatgccaat 2520 gtgtttgaca caaagcctct gcctaaattg aatttagaat agaaggggaa attttttctt 2580 gaaaaacatg tgttaatagc aagcaaccta ttttgtgctg ttatcatata attgcaagct 2640 ttcactgctc tctggcagct attagaattt tggaattctt cagtctcgaa tacttcaagg 2700 cctttgacat aatattttac atcctccagc atcaagctgg atccaaatgt gctagttaag 2760 acaaccatgc tattatctgt caagggtata tttttcagcc ctaatttttc tatatagtca 2820 gaaccatata ttgaatacat cacaactaat cctggtgagc cttctacaac tggtatccat 2880 ttttctgttt gaaaccagcg gaaattgtag ttatctcttc tcctggcttc acatggataa 2940 atgttatcaa taattggtat agccatagca aaattcacat ccttcagcac caaatttatg 3000 catgttttga atacacttac agagtcctca ttcaatgttt tcattgtgct aattttcctt 3060 tctaagtttt catcataggt catttttgta tcagaatctg ggtttatgaa ggtcctagct 3120 tttgatctta aaatcctgtc taatgccaat ttctcagtag attgacttga caattgattc 3180 ctctttgcag ggcttgtgta cagaaataat tggcttaaca aaaaatctct gtcatttaat 3240 ggtgctatta aaatagtttc agggttcttt atcattattt catgcacctc ctccatctca 3300 tttgcgggag ctattttctc ataatcatct aaatcttcaa tcagcatgtc ttcgtcagac 3360 ttgatttcct tagtgctatt atgaagttgt tgattctttc ttagatgagg gtataatttg 3420 caaaaatcat tataactgga catttttgac aaagcatttt catttataaa ctgaggcaac 3480 ctaattattt gagtcatcat tgtctgaaat ttcatcccta tatttaaaac atccgaatct 3540 tcagatacag aggactgctc aaatagattc attaaaaaga tcatcttttt atcattgagc 3600 tctaatttat ctttttcctt tttctgttta agttcttcaa atcttaaatc aaggaacctt 3660 tcagaggatg tgctttgttt tacttgctca aaatcatctt tctttaagaa atctctgatt 3720 atattgtaat agatagtctg atcattagat gatggaccta atagtgacaa tgattccaca 3780 tttgcagtta accatccacc tagatttgtg ggtatttcat tatgttccag attcacacct 3840 gctttcttgc atatcctcat ggtatcatta atttcacctg gtaacataga ataaatggat 3900 aatgcttgtg tttgaacagc tccataagaa aatggaatga cttcatttgg gcatcctttc 3960 cttaaaagca ttgttacgtt tatacttagt gacattaagt catcaaaata acttatatgt 4020 gacgattcag tgcagcaatt ggctaaatgt ctgcaatata ggggtataat agctccattt 4080 actattcttt cggagataaa ttcaacttct gaagaggaag catagctttt tttaggattc 4140 agagttatgc aaaaactctt aaaatgtgat tcaatgcttc taaaaaccat ttcagaaaga 4200 cttttgctgc tgaaatctgt taacatttgg tcaatatcac catcagcaat taaagatgtt 4260 gcattgtcat cggaatggac aatccatctt gtttggaact cacacttttt gtaactttca 4320 agcattctat gataagcttt catagcgcaa gaatgataaa cagaagataa ataattaaga 4380 ttcccttgta accaattcat gcttactgga taagaattag tagaaagacc tttggtgagc 4440 aacccaatgg ctgtttcatt agtcccaaat ttctcttgtg aattccttaa acctaagaaa 4500 atgtctgttg gaatgcacac ctttttcaat ttcacataca tcatcagaca atcaaccatt 4560 aatgtgcact cacctgatgt caatatagga ttcattataa tggccaatat atacttgtat 4620 gttaagtcag aagctgacca cttagattga tcagctgata aaaatgctaa cttagatttg 4680 ttcttgctgt ttttcaatat atcattgtat gatgttatcg tgtccatcga caacatggat 4740 aatgctctta ttttattgtc accactaatg gatatggcct ctgaagggtc actttgggca 4800 acatgcctga aagtatgttc tatgaaataa agcatcattt ttactttcat actcatgagg 4860 taaatttctc tatctgtttt agttctttgc atcttctcaa atacagaaac taaaaaatct 4920 attgcatcag aagcattttt agctttagac atgacgaatt ctaacatttg taggaaagtg 4980 tgtttttttc cttctagacc tttccctaaa ttcattatag attccatatc tatgtccatg 5040 atgttatggt attgtttgat taagtcatac agttcttcag acactttctt tgatttaaga 5100 acagttatat tattcctgta atataatttt gtcttcaaat atgtttccac tgttaaagga 5160 tggttattcc gaatgaactt agatgttttt gatttacctg ttgttatttt ttcagaagat 5220 ttgattgtct tcattttttc cataaggtaa taagggtttt cagagtgatc ttcaaaaaat 5280 tcatacaacc tgtttttatc ttcatgaaga gttctaagca aacctttcaa gattgccaaa 5340 ttttttggac tcaaatcttc cagtaatcta acatttactt cttgaagaca gttaattata 5400 tcatctgaac aaattatatt agattgagaa cacttttttg aagatttcaa agtggaaatc 5460 ttgtaacaag gactcaaaaa gtcttctttg ttttcaattt ctgttctcat cagcccaaca 5520 ttttcaacag tcgatgcgta gtaatcagaa agagatttta agttcaagac accgtttata 5580 gaaaataact cgttgtcttg gaacatcttt tgttttggat agatatcttc aaataaagta 5640 aaccccattt cctttctgaa ctttaactcc cattctgcag gtacatttag taggcttgtc 5700 aaattatgga aatgattgtg gagtgattta ggcatcatat atattgccaa ataaacattg 5760 ttgtataaat cttctaatgt cttaagagta gcacctgtga ttgtgcattt tatgttcaaa 5820 tttgtgattc ctcctatcac atcattctca tgatcaataa ccacaggttt tgcacttgta 5880 cttaaattta agttctccat tttgagaaga agctttttta ttccttcaac aaagaacatg 5940 tcagcaacat ttgttatgtc tggatcaaat ttatcttgta tgtattcttt tatatttgaa 6000 tagtctgata aaggtaggaa tcctgcatat ctcatgaagt caaagattcc catcctgcta 6060 agctttgtga ctgttcctat catgacagaa gaaaagacaa tatttctcat tattcttctt 6120 acattagagc tcatgcttag tgtttgcact tcttgcatat cttttatttt cagccaccct 6180 tctaattcat gagctttttt ggaaaactga gcaaaacaaa ctggaacttt gctgggagat 6240 ttgaaaaggc taagaagtct aacttggttc agcctttgcg gcctcataat gtatacaaca 6300 tgactaccaa atgaaaaatg actatatatt tcttttgtgt aacacacact aaactgctca 6360 gatagagtct cttccaccat gtggactagt atgtaaggaa ctcctgaccc tcctgtgttt 6420 agcccatctc ctttaaaagc caaaactagc atgctagtat ttgaggttgt caatatcttg 6480 aaactttctt tagtcatgta cctgtcagca accatcaaac ctttagatat ttgcatcatg 6540 tcctcggcat aattgtatat agctagatca ttgcataatt tgtttatctt tttacaagtt 6600 tccatttctg tttttatgat agttgattga gtgaaaagat tttcaggatt ttttgtataa 6660 ttgttgtaaa cagtggccac tttgcaattt tctctaatgt ctgagttatg aagaacaaat 6720 aatccatctt ggatctgtga gcaccattct aagctctctt cattatcatg tctgataagc 6780 ttctttgcgt gggtgaatga agataaatct aaactcacat aatcatcatt agggtcatac 6840 tgtctctctg atgtatcata ttctagacct tttgtgattt tctcttttag ttcctcatgc 6900 tttattatcc ttttcttttt actcatgctc acgttcataa cactcaaacc tttaaaatag 6960 atcactttat tatctttact ggtttccctc atgttaaact catttctatt tctagtcaaa 7020 caatcatttt tcttaatcca ctcttgtgat ttgctagttc tttccacttt tataccacct 7080 gtgcttatgt caatttcgtc ttccaattgc tgggagtcca ttccacttgt atcacagctt 7140 agagttgtta gacaggacct gacaagttca gtcacatcct ttgctttgct ggtcacattc 7200 atctctttgc tataagctga attatatctg atcctaggat tgctaaggaa agctttcctg 7260 aaccgatcaa taactgcatt gttataatct tggtttccta gttccaccat atcagtgcaa 7320 ggtgaccaag tgacagaaaa atttgtcttt gtttcagaga gatcacttgt gaaacaattt 7380 gggtatttct tttcatactc ttcagcattc aagttgaatg cagtcattat gtcaggtata 7440 atcttttctt tttgtttttt catttttatc ctatccataa ccttaatcaa atgatgatca 7500 tataaagatt cccacaaacc cttagtagat aacagatgat cttttaattc tgaaatgtct 7560 ttcttaggtt ctacattcag attcacacaa gaggatctat acccattaaa tctatcagca 7620 atatgttgat catccattgt ctctatatgc aagcaaaaat tcccaaacat aaaatgaaca 7680 atttcttccc tacttacgtc atctgttacc attgattcaa ttatcttctc caaatcctct 7740 gaatgagcaa tctgtgttgg atctctgtct ttatatttat ttgtccaatg actaaaaaat 7800 atgtctttag agccgaactc ttcacccagt atgctcctaa attcaatttt taacttttga 7860 gtgtctgcat aaaattctct aacaacagta ggagttgtgc caattatctg gcctatgtta 7920 gacaccccga caagccttga ttggcttgcg tgtctcaacc tattggcatg caatgcagat 7980 tctgaatctt caaatttccc taagactctg ctagtcgtga ccactatagg catagatcca 8040 ataggtttaa gaataacaat agagatgaat atgggatgct cttccaggaa agatttaccc 8100 ttgactttca catctttcaa tgatttccat atgtttttgt aacatttctc tgttgtttta 8160 gtttctgttt tagcatcaac agaaattttc caatcataga tcatcatgca aagaggacca 8220 ctcttagatt ctttgtatat cacaaagtta tcaggagtag cattggtagc aacatattct 8280 ttactgacct ttttgaaatc ttcttcagac agtctgttag aacattcttt cttgcttagc 8340 tcttcaaaat actctctgac agcatgctct atctccacat catgtctttt tttaggtttt 8400 aaatgcaaat gtcttgaaac cagctcaccg aacatatcat gtctagctag ttcagtttca 8460 agatatttct gctcaaggag agtcatgtct tcagatatct ttttcatgtc aactgtagcc 8520 aatcctgttt caatcccttc accatcccta gtaattcttg ctattagagt tcttaaagct 8580 tcatagtttt tagcattgtt atttataata atatcttcag ttatttcatc tgggttcttt 8640 ttatggaggt ctctgcttaa ctctaaattg cttttgatac aatcatcaat tgacgatagt 8700 aaagtaacag aattttctat taataatctt gctttgtaat tgttcattct gaataaattg 8760 ttgttgcctg attgctct 8778 //