ID GQ336990; SV 1; linear; genomic RNA; STD; VRL; 4960 BP. XX AC GQ336990; XX DT 18-AUG-2009 (Rel. 101, Created) DT 18-AUG-2009 (Rel. 101, Last updated, Version 1) XX DE Impatiens necrotic spot virus segment M, complete sequence. XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4960 RA Cheng X.F., Dong J.H., Zhang Z.K.; RT "Molecular Characterization of Phalaenopsis Isolate of Impatiens Necrotic RT Spot Virus from Yunnan"; RL Unpublished. XX RN [2] RP 1-4960 RA Cheng X.F., Dong J.H., Zhang Z.K.; RT ; RL Submitted (30-JUN-2009) to the INSDC. RL Biotechnology and Genetic Germplasm Institute, Yunnan Academy of RL Agricultural Sciences, No. 9 Xueyun Road, Kunming, Yunnan Province 650223, RL China XX DR MD5; ba6e59ff651626947dfde622339dec24. DR EuropePMC; PMC5946465; 29747679. XX FH Key Location/Qualifiers FH FT source 1..4960 FT /organism="Impatiens necrotic spot virus" FT /segment="M" FT /host="Phalaenopsis amabilis" FT /isolate="Phalaenopsis" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="06-Jun-2006" FT /db_xref="taxon:11612" FT gene 86..997 FT /gene="NSm" FT CDS 86..997 FT /codon_start=1 FT /gene="NSm" FT /product="non-structural protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:C7F6X0" FT /protein_id="ACU33929.1" FT /translation="MNSLFKSLRSSSSRELDHPRVATTLSKQGADIVVHNPSANHNNKE FT VLQRAMDSSKGKILMNNTGTSSLGTYDSDQISESESYDLSARMIVDTNHHISSWKNDLF FT VGNGDKAATKIIKIHPTWDSRKQYMMISRVVIWICPTIADPDGKLAVALIDPNKSVNAR FT TVLKGQGSIKDPICFVFYLNWSIPKVNNTSENCVQLHLLCDQVYKKDVSFASVMYSWTK FT EFCDSPRADLDKSCMIIPINRAIRAKSQAFIEACKLIIPKGNSEKQIRRQLAELSANLE FT KSVEEEENVTDNKIEISFDNEI" FT CDS complement(1461..4874) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="contains G1 and G2" FT /db_xref="GOA:C7F6X1" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:C7F6X1" FT /protein_id="ACU33930.1" FT /translation="MKILKMCELLIKISVCTLVVTSVILSFMALKETDAKIHVERGDHP FT EIYDEAYYDRSVDHKNEILDTLAEMLQNATGKTLRPTRDTQTVLTNNEVPQSPSGLSST FT PTTISVMDLPNPCLNASSLTCSIKGVSTFNVYYQVESNGVIYSCISDTITKLGNCEGSS FT ELPRSFETVPVVPITKIDNKRKLSIGTKFYIIESLENYNYPIMYNSRPTNGTVSLQSVK FT FSGDCKISKINIVNSYTVSLTTPEKIMGYVVKREGSDMSHSIISFSGSVSLTFTEENMD FT GKHNLLCGDKSSKVPLVDKRVRDCIIKYSKNIYKQTACINFSWLRLIIIALIVYFPIRY FT LVNKTSKTLFLWYDLLGLITYPILLLINYLWSYFPLKCKVCGNLCLVTHECSKLCICNK FT NKASEEHSEECPIITRTAEKNKKYNWASIEWFHLIVNTKISLSFLKAVTETLIGFLILS FT QMPMSMAQTAQCLDSCYYVPGCDRFVTNRYDKCPEKDQCFCAIKENSIVESNFLTNVVT FT EGPMDCIPYQECKGRITENALVTFVKCRFGCEYASIFQSKPLDNGFLEYSGDTLGLNAV FT NLHFMKRLRNGIIDFYNKTEKYGYISGDALKSNESDIPESIFPRKSLIFDSMIDGKYRY FT MIEESLLSGGGTVFSLNDKSSSTAQKFVVYIKKVGIQYDVSEQYTTAPIQSTHTDFFST FT CTGKCSDCRKEQPITGYQDFCITPTSYWGCEEVWCLAINEGATCGFCRNVYDMDQSFRI FT YSVIKSTIKSEVCISGFVGAKCFTVSEEVPSESGYFQADILADFHNDGLTIGQLIAHGP FT DSHVYAGNIARLNDPSKMFGHPQLSHQGDPIFSKKTLDTNDLSWDCSAIGKKTVTIKSC FT GYDTYRFKTGLNQISDIPVQFTDQNSFYMEKIFSLGKLKIVLDLPSELFKTVPKKPILS FT SVSLSCKGCFLCSQGLRCAASFISDITFSARLTMRQCSLSTYQIAVKKGANKYNLTMFC FT TSNPEKQKMIIEPEGDKSYSVEALVDSVTVLEPENIIDQNDQYAHEEQQYNSDTSVWSF FT WDYVKSPFNFIASYFGSFFDTVRVILLILFVFALAYLCSIVATMCRGYVRNKSYKTKYI FT EDINDYFLVSTSSGRDTITRRRPPLDFSGI" XX SQ Sequence 4960 BP; 1659 A; 846 C; 816 G; 1639 T; 0 other; agagcaatca gtgcatcaaa attatatcta gccgaattca atcattatct tctcaatatt 60 ttaattctta atctaccgtc cagagatgaa tagtttgttc aaatcgctca gatcatctag 120 cagcagggag ctagatcacc ctagggttgc aactacccta tctaaacaag gagcagacat 180 tgttgtacac aacccttctg ctaaccataa caacaaggaa gttctccaaa gagccatgga 240 tagctctaaa ggaaagattt tgatgaacaa tacaggcacc tcatcactag gcacatatga 300 ttctgaccag atatctgaat cagagtcgta tgatctttct gctagaatga ttgttgatac 360 aaatcatcat atctccagct ggaaaaatga tctttttgta ggtaatggtg ataaagctgc 420 aaccaagata attaagatac atccaacctg ggatagcaga aaacaataca tgatgatctc 480 aagggtagtt atctggatat gccctactat agctgatcct gatgggaaat tggctgtagc 540 tttaattgat cctaacaaga gtgttaatgc cagaactgtt ttgaaagggc aagggagcat 600 taaagatcct atatgttttg ttttttatct aaattggtcc attccaaaag ttaacaacac 660 ttcagaaaat tgtgttcagc ttcatttatt atgtgatcaa gtttacaaga aagatgtctc 720 atttgctagt gtcatgtatt cttggacaaa agaattctgt gattcaccaa gagcagatct 780 ggataaaagc tgcatgataa tacccatcaa tagagctatt agagccaaat cgcaagcctt 840 cattgaagcc tgcaagttaa tcatacctaa aggcaattct gaaaagcaaa ttagaagaca 900 actagcagag ctaagtgcca atttagagaa atctgttgaa gaagaggaga atgttactga 960 taacaagata gagatatcat ttgataatga aatctaaata tgtttccatt taataataaa 1020 taatatatat tgttcacaat gtattgaatg tttaagtaaa caataaagca agataaaact 1080 atatatgtat atatatatag aaatataaaa tatatatgta tttgtgttta aaacaaatca 1140 aaacaaaaaa agaaaaaaag aaaaataaaa caaaaacaaa aacaaaaact aaaacaaaca 1200 aaaagcaaaa aaatagaaaa aagaagaaaa aaccaaaaaa attgtaaata aataaggctc 1260 cggccagatt tggtctaaga cctttttatt tgtttttata cattttattt gtttttgttg 1320 gttttatttt ttattatttt tatattttta tatagtttgc ttatttaaca cttatttaga 1380 caaattaaat tttatttgat tacaattatt ctaccttatt taatttagaa cacatttggt 1440 gtatattcca atgaatttaa tcatataccg ctgaagtcta gaggaggtct tcttctagtg 1500 atggtgtctc taccagaaga tgtggaaacc agaaaataat cattaatgtc ttcaatatat 1560 tttgtcttgt atgacttgtt tctaacatag cctctacaca ttgtggcaac aatagagcaa 1620 aggtaagcaa gagcaaatac aaagagtatg agcaatatta ccctgactgt atcaaagaag 1680 gatccaaagt agcttgctat aaagttaaaa gggcttttaa catagtccca aaagctccaa 1740 actgatgtgt cagaattata ttgctgttcc tcgtgtgcat attggtcatt ttgatcaatt 1800 atgttttctg gttccagcac agtaacagaa tctacaagtg cctcaactga gtatgatttg 1860 tctccttctg gttctataat cattttttgt ttttctgggt tagaagtgca gaacattgtc 1920 aagttatact tattagcacc tttctttact gctatctggt atgttgacaa tgaacattgt 1980 ctcatggtta acctagcaga aaaagttatg tctgatatga atgaggcagc acacctcagc 2040 ccttggctac ataagaaaca tcccttacag cttaaagaga cagaactcaa tataggcttt 2100 tttggtacag ttttaaacaa ttcagaaggt agatccaaaa caattttaag cttacctaga 2160 ctaaagatct tttccatata aaaactattc tggtcagtaa actgaactgg aatatctgat 2220 atttggttca aacctgtttt aaatctgtat gtgtcataac cgcatgattt tattgtaact 2280 gtttttttac caattgctga gcaatcccag gacagatcgt ttgtatctaa tgttttctta 2340 gagaaaatgg gatcaccttg gtgtgaaagt tgaggatgac caaacatttt tgatggatca 2400 tttaatctag ctatgtttcc tgcatataca tgactatcag gtccatgagc tatcagctgg 2460 cctattgtta aaccatcatt atggaaatcc gctaatatat cagcctggaa atatcctgat 2520 tcagatggga cttcctcaga tacagtgaaa cactttgctc ccacaaatcc agatatacat 2580 acttcagact tgattgttga tttaataaca gaataaatcc tgaaagattg atccatatca 2640 tacacatttc tacaaaaccc acaagtggct ccttcattga tagccaaaca ccaaacctct 2700 tcacaacccc agtaagatgt tggtgttatg cagaaatctt gatacccagt tattggttgt 2760 tcttttctgc aatctgagca tttacctgtg catgttgaaa agaaatcagt gtgggtgctt 2820 tgtataggag ctgtagtgta ttgttcagaa acatcatact gtattccaac ttttttaata 2880 taaacaacaa acttctgagc agtgctggaa cttttgtcat taagagagaa aactgtgcct 2940 ccacctgata ataaagattc ttctatcatg tatctatatt ttccatctat catcgagtca 3000 aatatgagag attttcttgg gaaaatgctt tcaggtatgt ctgattcatt agatttaagt 3060 gcatctccag aaatgtatcc atatttttca gttttattgt agaaatcaat tataccattc 3120 ctaagccttt tcatgaagtg gagattcaca gcattcaaac ccaatgtgtc accagaatat 3180 tctaagaacc cattatctaa aggcttgctt tggaaaatag aggcatactc acaaccaaat 3240 ctgcatttga caaaagttac caaagcattt tcagttatcc tacctttgca ttcttgataa 3300 ggtatacaat ccataggacc ttctgtcaca acattggtta gaaagttaga ttctacaata 3360 gaattttctt taatagcaca gaaacactgg tccttttcag gacatttgtc atatctgttt 3420 gtaacaaagc ggtcacaacc agggacataa taacagctat ccaaacactg agcagtttga 3480 gccatagaca taggcatctg tgacaaaatc agaaatccta tcaaagtttc tgtgactgct 3540 tttaggaaag agaggcttat ttttgtatta actatcaaat ggaaccattc gatgctagcc 3600 cagttgtatt tcttattctt ctctgctgtt ctagttatta taggacattc ttctgagtgt 3660 tcttcagagg ctttgttttt gttacaaata cataattttg agcattcatg ggttaccaaa 3720 cataaatttc cacagacctt acatttcaag ggaaaataag accataaata atttatcagt 3780 agtagtatag gatacgttat caatcccaga agatcatacc atagaaacag tgttttagat 3840 gttttattta ccaagtacct tatagggaaa tagacaatca gagcaattat gatcaatctg 3900 agccatgaga agttgatgca agcagtttgt ttgtaaatat ttttggagta ctttataata 3960 caatctctaa ctcttttatc caccaaagga actttagaag atttgtcacc gcacaatagg 4020 ttatgcttac catccatatt ttcttctgtg aaagtcaaac taactgagcc ggagaagctt 4080 attatagaat gactcatgtc acttccttct cttttgacga cataacccat aattttctca 4140 ggtgtagtta atgaaactgt ataagaatta actatgttta tttttgatat tttacaatca 4200 cctgagaatt tcacactttg gagagagact gtgccattag ttggtctaga attgtacatg 4260 attggataat tgtaattctc caaactttca attatataaa atttagttcc tatagataat 4320 ttccttttgt tatcaatttt tgttattggt acaactggaa cagtttcaaa gcttcttggc 4380 aattcagaag atccttcaca gtttcccaat ttagttatag tgtcactgat acatgaatat 4440 ataacaccat tgctttctac ttggtaataa acattgaatg ttgaaactcc tttaatgcta 4500 caagtcaaac ttgaagcatt taggcatgga tttggtaaat ccataactga tatagttgtt 4560 ggtgtagaag acaatccact tggagattga ggtacctcat tattggtaag aacggtttga 4620 gtatctcgtg ttggtctaag ggttttacct gttgcattct ggagcatttc agccaaagta 4680 tctaggattt catttttatg atcgacagaa cggtcataat aagcttcatc ataaatttct 4740 ggatgatcgc ccctttcaac gtgaatcttt gcatctgtct cctttaatgc cataaaagat 4800 aagataacag aagtaacaac tagtgtacat acactaattt taataagtaa ctcgcacatc 4860 tttagaattt tcattctaaa aagtcgaata acactagttc taaaattgct ttatgagttt 4920 gatctgttgt atgtagagtt ttgtttgcac tgattgctct 4960 //