ID GQ334472; SV 2; circular; genomic DNA; STD; VRL; 2591 BP. XX AC GQ334472; XX DT 20-SEP-2010 (Rel. 106, Created) DT 24-MAR-2011 (Rel. 108, Last updated, Version 3) XX DE Tomato leaf deformation virus isolate PE:PT1:To:03 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf deformation virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2591 RX DOI; 10.1007/s10658-010-9699-5. RX AGRICOLA; IND44455481. RA Marquez-Martin B., Aragon-Caballero L., Fiallo-Olive E., Navas-Castillo J., RA Moriones E.; RT "Tomato leaf deformation virus, a novel begomovirus associated with a RT severe disease of tomato in Peru"; RL Eur. J. Plant Pathol. 129(1):1-7(2011). XX RN [2] RP 1-2591 RA Marquez-Martin B., Aragon-Caballero L., Navas-Castillo J., Moriones E.; RT ; RL Submitted (26-JUN-2009) to the INSDC. RL Estacion Experimental 'La Mayora', CSIC, Algarrobo-Costa, Malaga 29760, RL Spain XX RN [3] RC Sequence update by submitter RP 1-2591 RA Marquez-Martin B., Aragon-Caballero L., Navas-Castillo J., Moriones E.; RT ; RL Submitted (27-SEP-2010) to the INSDC. RL Estacion Experimental 'La Mayora', CSIC, Algarrobo-Costa, Malaga 29760, RL Spain XX DR MD5; 0b7a81b9ab54a42d3277b4017e3b69b1. DR EuropePMC; PMC3648196; 23468482. XX CC On Sep 27, 2010 this sequence version replaced gi:261887544. XX FH Key Location/Qualifiers FH FT source 1..2591 FT /organism="Tomato leaf deformation virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="PE:PT1:To:03" FT /mol_type="genomic DNA" FT /country="Peru:Carabayllo" FT /collected_by="E. Moriones" FT /collection_date="May-2003" FT /db_xref="taxon:681518" FT gene 176..934 FT /gene="AV1" FT CDS 176..931 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="CP" FT /db_xref="GOA:E2CUT4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E2CUT4" FT /protein_id="ACY05952.2" FT /translation="MPKRDAPWRLMAGTSKISRTSNYSPRGGMGPKFDKNAAWVNRPMY FT RKPRVYRVLRGPDVPKGCEGPCKVQSFEQRHDISRIGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRSYFYDSITN" FT gene complement(928..1326) FT /gene="AC3" FT CDS complement(928..1326) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /note="REn" FT /db_xref="GOA:E2CUT5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E2CUT5" FT /protein_id="ACY05953.1" FT /translation="MDSRTGENITVHQAENSVFIWEVPNPLYFKIQNVEDIPSTTTRVY FT HIQIRFNHNLRKSLQLHKAFLNFQVWTTSVQASGTTYLNRFRHLVLFYLDNLGVISINN FT VIRSVRFATDKPYVNHVLENHSIKIKLY" FT gene complement(1073..1462) FT /gene="AC2" FT CDS complement(1073..1462) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /note="TrAP" FT /db_xref="GOA:E2CUT6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E2CUT6" FT /protein_id="ACY05954.1" FT /translation="MQNSSSSTPPSIKTRHKIAKAKPIRRKRIDLDCGCSFFLHINCVN FT NGFTHRGEHHCASGREFRFYLGGTKSPLFQDTERGRHTVHNDESIPHPNTVQPQPEEVA FT STTQSLLELPSLDDISSSFWDDIFK" FT gene complement(1413..2459) FT /gene="AC1" FT CDS complement(1413..2459) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /note="Rep" FT /db_xref="GOA:E2CUT7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E2CUT7" FT /protein_id="ACY05955.1" FT /translation="MPPPKAFKINAKNYFLTYPHCNLTKEEALSQLQNLETPTNKKYIK FT IARELHEDGQHHLHVLLQFQGKFQCKNNRFFDLVSPTRSTHFHPNVQGAKSSTDVNAYV FT DKDGDTLEWGEFQVDGRSARGGSQTANDAAAEALNSGSKEAALQIIREKLPEKYLFQFH FT NLNCNLDKIFSKAPEPWSPPFPLSSFTNVPEEMQEWADDYFGRGAAARPERPISIIIEG FT CSRTGKTMWARALGPHNYLSGHLDFNSKVYSNGADYNVIDDVSPQYLKMKHWKELIGAQ FT KDWQSNCKYGKPIQIKGGIPSIVLCNPGEGQSYKDFLEKEENAALRAWTLHNAKFIFLN FT SSLYQNEA" FT gene complement(2045..2302) FT /gene="AC4" FT CDS complement(2045..2302) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E2CUT8" FT /protein_id="ACY05956.1" FT /translation="MGNIISTCYSSSKANSNVRITDSSTWYPQPGQHISIRTFRELNPA FT PTSTPTSTRTEIHLNGENSKSTAEVLEEAAKLLTTLPQKP" XX SQ Sequence 2591 BP; 670 A; 532 C; 592 G; 797 T; 0 other; accggatggc cgcgcgattt ttttaccccc ttgttaagtt tgggaccaca catatacgga 60 caaaaccttt tgtccaatca tagagcgtct gacgagctta attattaaat tcctttagac 120 tgagtggtct ataaagaccc agacaaactg taataattga tatctttaac tcaaaatgcc 180 taagcgggat gccccatggc gcttaatggc ggggacctca aagattagcc gtacctccaa 240 ttattcaccc agaggaggta tgggccctaa attcgacaag aatgcggcct gggttaacag 300 gcccatgtac aggaagccca gagtataccg ggttttaaga ggcccagatg ttcccaaggg 360 ctgtgagggg ccctgtaagg tccagtcttt cgagcagcgt cacgatatct cccgtattgg 420 caaggtcatg tgtatatccg atgtcacccg tggtaacggt attacccacc gagtcggtaa 480 gcgtttctgt gtgaagtccg tctatatttt aggtaaaata tggatggacg agaacatcaa 540 gttgaagaac cacactaaca gcgtcatgtt ctggttggtc agagaccgga gaccctatag 600 ctctcccatg gactttggcc aggtgttcaa catgttcgac aatgagccca gtactgccac 660 cgtgaagaac gatcttcgag atcgttttca ggttatgcat aggttctatg ctaaggtcac 720 gggaggtcag tatgccagta acgagcaggc tctggtgagg cgcttttgga aggtcaacaa 780 tcatgtggtc tataaccatc aggaagctgg gaaatacgag aaccatacgg agaacgccct 840 attattgtac atggcatgta ctcatgcctc taaccctgtg tatgctacgt tgaaaatacg 900 tagctatttt tatgattcaa taacaaatta ataaagttta atttttattg aatgattctc 960 aagtacatga tttacatatg gtttatctgt tgcaaatcga acagatctaa ttacattgtt 1020 aatagaaata actcctaaat tatctaaata aaataaaact aaatgtctaa atctatttaa 1080 atatgtcgtc ccagaagctt gaactgatgt cgtccagact tggaagttca agaaggcttt 1140 gtgtagttga agcgacttcc tcaggttgtg gttgaaccgt atttggatgt ggtatactct 1200 cgtcgttgtg gacggtatgt cttccacgtt ctgtatcttg aaataaaggg gatttggtac 1260 ctcccagata aaaacggaat tctctgcctg atgcacagtg atgttctccc cggtgcgtga 1320 atccattatt aacacagtta atatgcagga agaatgagca gccacagtct aggtctatgc 1380 gtttccttct gatgggcttt gccttggcaa tcttatgcct cgttttgata gagggaggag 1440 ttgaggaaga tgaattttgc attgtggagt gtccacgctc ttagagctgc attttcctct 1500 ttctcaagga agtctttata gctctgtccc tctcctggat tgcagagcac gatagagggt 1560 atgccacctt taatttgaat tggctttccg tatttacagt ttgattgcca atctttctgg 1620 gcccctatca gctctttcca atgtttcatc tttaaatatt gcggactgac gtcatcaatg 1680 acgttatagt ccgctccatt tgaataaact ttggaattaa aatccaggtg tccactcaga 1740 taattatgtg ggcctagtgc acgagcccac atagtcttac ctgtccttga acatccctct 1800 attattatac tgataggtct ttctggccgc gcagcggcac ccctaccaaa ataatcatca 1860 gcccattctt gcatctcctc cgggacgtta gtgaaggagg agagtggaaa cggaggagac 1920 catggctccg gagccttcga aaaaatttta tctaaattac aatttaaatt atgaaattga 1980 aataaatatt tttcagggag tttctccctt attatttgga gggctgcctc tttgctaccg 2040 ctatttaagg cttctgcggc agcgtcgtta gcagtttggc tgcctcctct agcacttctg 2100 ccgtcgactt ggaattctcc ccattcaagt gtatctccgt ccttgtcgac gtaggcgttg 2160 acgtcggtgc tggatttagc tccctgaacg ttcggatgga aatgtgttga cctggttggg 2220 gataccaggt cgaagaatct gttattctta cattggaatt tgccttggaa ctggagtagc 2280 acgtggagat gatgttgccc atcttcgtga agttcccttg caattttgat atatttctta 2340 tttgtgggtg tctctagatt ttgcaattgg gaaagtgctt cttctttggt taaattgcag 2400 tggggatatg taagaaaata attttttgca tttatcttaa aggccttagg tgggggcatt 2460 ttggtaataa atattttgga caccgattgg tttggcttct aaaacttata gcaatcggtg 2520 tactggagtc ttatttatag taggagttcc taaaggatct agcaacacgt ggcggccatc 2580 cgtataatat t 2591 //