ID GQ332372; SV 1; linear; mRNA; STD; VRL; 7341 BP. XX AC GQ332372; XX DT 08-DEC-2009 (Rel. 103, Created) DT 08-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate WAPN173 segment RNA1 polyprotein mRNA, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-7341 RX DOI; 10.1094/PHYTO-99-12-1394. RX PUBMED; 19900006. RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT "Genome diversity and intra- and interspecies recombination events in RT Grapevine fanleaf virus"; RL Phytopathology 99(12):1394-1402(2009). XX RN [2] RP 1-7341 RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT ; RL Submitted (27-JUN-2009) to the INSDC. RL Plant Pathology, Washington State University, Prosser, WA 99350, USA XX DR MD5; e0e4efb8a81b6dedcff7ab91a292b21d. DR EuropePMC; PMC3314827; 22218961. XX CC GenBank Accession Numbers GQ332368 and GQ332372 represent sequences CC from the 2 segments of Grapevine fanleaf virus isolate WAPN173. XX FH Key Location/Qualifiers FH FT source 1..7341 FT /organism="Grapevine fanleaf virus" FT /segment="RNA1" FT /host="Vitis vinifera cultivar Pinot Noir" FT /isolate="WAPN173" FT /mol_type="mRNA" FT /country="USA" FT /collection_date="2008" FT /db_xref="taxon:12274" FT CDS 243..7097 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D2IKR5" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:D2IKR5" FT /protein_id="ACZ58632.1" FT /translation="MWQVPEGSQCCCTGKSFSNAEAKELRYVCSCWMSTRLVKAEAPPR FT QPKKSGIAPTPQESKGTVQVPFPKAAGIKPSIQKSKGASVAPAPLFKQRCEVVVQYGPP FT ADIELVYPPLVREEEKSSKKVVLPPTPKVEARVPVCCAPKWMVALPRPPVKLAPKASKL FT QFPKGAVAYNGVNFIDIKGKVVLSEGAKRILKGIRVAAKQRHRAARRSAACKEVRAKRA FT LAKFEAIVQSERLDQLETGFQVVLPAPKMSCSLKEAAPSTTSTVVVRKRKLSKLPKILP FT EQDFSCLEGFDWGEKSHPVEADIEDDWVLVEKPVLKRQAAQTAQGRATETLTRFAATSG FT FSLGAHQKVEDFASLGEVEYLMAGEFADLCLLSLVYNDAPTLSATIEELGTKESFLEAI FT ELLKLELAEIPTDSTTCAPFKQWASAAKQMAKGVGTMVGDFTRAAGAAVIISFDMAVEF FT LQDKALKFCKKIFDVTMAPYLQHLASAHSILKKIWEKLSEWMESLKNKASLALEVMAQH FT AIFALGAMVIGGVVVLVEKVLIAAKIIPNCGIILGAFLTLFFASLGLTALECTAEEIFR FT MHACCKSAIYSMYSVEEPTMAGEGESHTMGATQGLDNAIQALTRVGQSMISFKLGSFSY FT YAKIAQGFDQLARGKRAIGELTSWLIDLVGSIYSQVSGQESTFFDELSTIVCLDVRAWL FT LKSKRVRLQVETMAIGDRITLDTIAKLLEEGHKILVTAAGVPRKTSADFTMCIKEEVSK FT LEEVHARTACAGINEGMRAFPFWVYIFGASQSGKTTIANSVIIPALLEEMNLPKSSVYS FT RPKTGGFWSGYARQACVKVDDFYAIEQTPSLASSMIDVVNSEPYPLDMAYIHEKGMSMD FT SPLVVTTANTVVPPTNSQVVDLPSFYNRRAAVLEVRRKDGSFFAPRAYDSCIEVRFVHN FT KCPYVDSAGVPQGPAVNTPMDEGWITPSEAVAVLKNLLGEHILAEEEKLLEYRERIGND FT HPIYNAAKEFIGNMHYPGQWLTAEQKSTYGIKDDGFSFLAVDGRMYKYNVLGKLNPCES FT DPPHPNVIPWLEKKTLEIVHWDVHKHIATGPRNALVACFLQGLVQGQSKVESVERMGKD FT SSPEQQSFFKRLSLSERIYLRLCQIRIDNTQKEELAGSGRGPMAILRECLLKSKQVVVE FT NYSLLLTLVAILLLISAAYTLLSTVVALASCSSFAGGMVAVTAVNNASIPCSEPRQEER FT YSPRNRFVSRISKIRGEGPSKGQGEHEELVTELYYYCDGVKKLISTCWFKGRSLLMTRH FT QALAVPIGNEIEVIYADGTIKKLVWPGRQEDGNCKGFVEFPENELVVFEHPHLLTLPIK FT YEKFFVDDADRQISPNVAVKCCVARLEDGIPQFHFWNKYAMARSEVHTLKDEGGGNVYQ FT NKIRRYIVYPHEAKKYDCGALAVAVIQGIPKVIAMLVSGNRGITYSSVIPNYSSSFVRG FT EVPYVPEDGLVTRGYRKVGYLRMSDAPHVPSKTSFMKVPDELCFPYPDPKQPAILSAED FT ERLKGTVHEGYTPIRDGMKKFAEPMHLLEEKLLDEVAGDMVQTWYDPGEFLEDISLEQA FT INGDSEEEYFDPLVMDTSEGYPDVLGRKPGEKGKARFFVGEPGSRVFVAGCNPEKAYYQ FT LVEDSKTKVPSLVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLM FT KKRGHLPCQVGINPYSREWTDLYHRLGELSDIGYNCDYKAFDGLITEQILSTIADMINT FT GYRDPIGNRQRKNLLLAICGRLSICGNQVYATEAGIPSGCALTVVLNSIFKELLMRYCF FT KKIVPPMYKECFDRCVVLITYGDDNVFTVAQSVMQHFTGDALKLQMAKIGVTITDGKDK FT SLSTIPARPLLELEFLKRGFVRSSGGMINAPLEKLSIMSSLIHIRSDGSDMLQKLLDNV FT NTALVELYLHGDRAYFESVRAFYMEKLPPGAYKELTTWFQAESFHECQNPRESGYKPQG FT LIEKSHGAAFASFTQQAGTELEKHDICPGLSIAGTKYIATENEIVLSLSSFLPGDRNAF FT KLDLPCGDGIGRLPSKCSILNLRKPGLVMRLCKRAQDEKKTLVIRDERPYIGAWAVACI FT CGESFGFGQQSVLTLYANLLGPNQKNGLASYFSDFESPIHIKRVHAKTNSHEGGEALKE FT VFNFCETIVYNATDADTRKEMLRNLPDVYPSISLVGGVCFPNEGGEPGALFSDNDALIA FT SQTPGVYVSEACLKCCHRCVGFTTKTVSSTVAFKNSLLKTHLKTLRRIQTHSCARR" XX SQ Sequence 7341 BP; 1998 A; 1437 C; 1845 G; 2061 T; 0 other; atgaaaaatt tctgcaggtt ctaacattac cgtgattgca atctttcttt gtgaagagtt 60 taagaaactc aagattggaa tctcgtgcaa agagtttgag aaactcaccc cgcgaagtgt 120 ttaagaaaca cactgttctg ttgtgtttgc caatcatttt gagcaaacta cttttacact 180 acatactcta ctgtgttatt tgtttgagtt cagttttgta gttgtaaggg ttgtttgcca 240 ctatgtggca agtacccgaa ggctcccagt gctgctgcac tgggaagtcc ttctcaaatg 300 cggaggctaa ggaactccgc tacgtgtgct catgttggat gagcacacgt cttgttaaag 360 ccgaggcacc tcctcggcaa ccaaagaaga gtgggatagc gcccactccc caagaatcca 420 aagggactgt tcaggtccca ttcccaaagg ctgctgggat taaacccagc atccaaaaat 480 ccaaaggagc ttctgtggct ccagcacctt tgtttaagca aaggtgtgaa gtggtagttc 540 aatacggtcc tccggccgat attgaactag tttacccgcc tcttgtgcgg gaggaggaga 600 aatcctccaa aaaagtggtt ctgccaccta ccccaaaggt ggaagcgagg gtgccagttt 660 gctgtgcacc caagtggatg gtggctcttc ctaggccacc ggtgaagcta gcccctaaag 720 ctagcaagct gcagttccct aagggagctg tggcttacaa tggtgtcaat tttattgaca 780 tcaaaggaaa agtcgtcctg tctgagggcg caaagaggat tcttaaggga atccgcgttg 840 ctgcgaagca acgtcatcgg gctgcgcgca ggtctgctgc gtgcaaggaa gtgagggcca 900 agcgtgccct cgctaaattt gaggcaatcg ttcaaagtga acggttggac cagttggaga 960 ctgggttcca agtggtgctt ccggcaccaa aaatgagctg cagcttaaaa gaagctgccc 1020 cttctaccac ttctacggtg gtagttagga aaaggaagct ttcaaagctt cccaaaattc 1080 tgcccgagca ggacttttcc tgcttggaag gctttgattg gggggagaaa tcccacccgg 1140 tcgaggcaga catcgaggac gattgggtcc tcgtggaaaa acctgtcctt aagagacagg 1200 ctgcgcaaac tgcgcagggt agggcgaccg agaccttaac tcggtttgca gctaccagtg 1260 gcttctcact gggtgcccac caaaaggtgg aagattttgc ttcacttggt gaagtggaat 1320 acttgatggc aggagagttt gcggacctct gtttgctatc tttggtgtat aatgatgcac 1380 caacgttgtc tgcaactatt gaggagcttg gaacaaaaga aagcttccta gaagctattg 1440 aactcctcaa gttggaatta gctgaaattc caacagactc caccacatgt gccccgttta 1500 aacagtgggc ctctgctgcc aagcagatgg ccaagggagt tggtactatg gttggagatt 1560 ttaccagagc tgctggagct gctgtcatta tttcctttga tatggcagtg gaattcttac 1620 aggataaggc gttaaagttc tgtaaaaaaa tctttgacgt aacaatggct ccatatctgc 1680 agcaccttgc cagtgcacat tccatcctta agaagatttg ggaaaaattg tcagaatgga 1740 tggagagcct caaaaataaa gctagtctag cacttgaagt gatggcacaa catgccattt 1800 ttgctttagg tgctatggtt ataggaggcg tagtagtgtt ggtagaaaaa gtgcttattg 1860 cagccaagat tatcccaaat tgcgggatta ttttgggtgc ttttttgaca cttttctttg 1920 ccagcctagg gttaacagcc ctggagtgca ctgcagagga aatcttcaga atgcatgcat 1980 gttgtaaaag tgctatttac tccatgtatt ctgttgaaga gcctaccatg gctggtgaag 2040 gggaatccca caccatgggg gcgactcagg gacttgataa tgcaattcag gccctgactc 2100 gagtaggaca gagtatgata agcttcaaac tggggagctt ttcatattat gcaaagatag 2160 cccagggatt tgaccaactt gcaagaggca agcgagcaat aggtgaactt actagttggc 2220 tcatagatct tgttgggagt atttactctc aggtctctgg acaggagagc accttctttg 2280 atgagctttc tacaattgtt tgcctggacg tgagagcgtg gctgctgaaa agtaagcgcg 2340 ttcgattgca agttgaaacc atggccatag gcgatagaat aaccttggat actattgcca 2400 aattattaga agaaggccat aagatattgg ttactgctgc aggtgttcca aggaagacat 2460 ctgctgattt cacaatgtgc atcaaagaag aagtatccaa attggaagag gtacatgcta 2520 gaacggcgtg tgcaggaatt aatgagggta tgagagcttt tcctttttgg gtatacatct 2580 ttggtgcttc acagtctggg aagacaacga ttgcaaactc agtcattatt ccagctttgc 2640 tggaagagat gaatcttccc aagagttcag tttattccag gcccaaaact ggtgggtttt 2700 ggagtggtta tgccaggcaa gcgtgtgtga aggttgatga tttttatgct attgagcaaa 2760 cacctagctt ggcgagttcc atgattgatg tggtgaattc tgagccttat cctcttgaca 2820 tggcttatat ccatgagaaa ggaatgtcaa tggattcccc attagttgta accactgcaa 2880 acaccgttgt gcctcccact aattctcaag tggtggattt gccatcattc tataatagga 2940 gggcagcggt gctggaagtg agaaggaaag atgggagttt cttcgcgcct agggcatatg 3000 attcatgcat tgaagttcgc ttcgtgcata acaagtgtcc gtatgttgat tctgcaggag 3060 tgcctcaggg tcctgcagtg aacactccca tggatgaagg atggatcact ccaagtgagg 3120 ctgttgcagt cctcaaaaat ctcttgggtg aacatatctt ggctgaggaa gaaaagctgc 3180 tggagtatag agagcggatc ggtaatgatc atcccatata caatgcagca aaagagttca 3240 taggtaatat gcactatcct gggcagtggt taactgccga gcaaaagagt acctatggaa 3300 taaaagatga cggattctcc ttccttgctg ttgatggaag gatgtataaa tacaacgtct 3360 tagggaagtt gaatccgtgt gagtctgacc caccacatcc caatgttatt ccgtggctgg 3420 aaaagaaaac attggaaatt gtacactggg atgtgcataa acatattgcc actggtcccc 3480 gtaatgcgct ggttgcatgc tttttacagg gcttggtcca aggacaaagc aaggtagaga 3540 gtgtggaacg aatgggaaaa gatagttctc cggagcagca aagtttcttc aaacgcttga 3600 gtctatccga gagaatttat ctgagattat gccagatccg cattgacaat acccagaaag 3660 aagagctggc gggatccggt agggggccta tggcaatact gagagaatgt ttgttgaaga 3720 gtaagcaggt agtcgtggaa aactactcat tgctattgac actggtagca attcttttgc 3780 ttatcagtgc tgcctatacg ctactctcaa cagtggtggc tttggcgagt tgctcaagct 3840 tcgcaggagg tatggtcgct gtgacagctg tcaataatgc ttccatacca tgttcggagc 3900 ctcgccagga ggaaagatat tcccctagaa atcgttttgt ctcgcgtatt tccaaaatta 3960 ggggtgaggg gccttccaaa ggacaaggag agcatgagga attagttact gagctctatt 4020 attattgtga tggagttaag aaattaattt ccacgtgttg gtttaaggga aggtcgctct 4080 tgatgacgag acatcaagcc ctggccgttc caattggcaa tgaaattgaa gtgatatatg 4140 ccgatggaac aataaagaag ttagtctggc caggtaggca ggaagacggc aattgcaaag 4200 gcttcgttga atttcctgaa aatgagttag ttgtcttcga gcatccacac ttgttgacgc 4260 tacccattaa atatgagaag ttttttgtag atgatgccga tagacagatt tcccccaacg 4320 ttgcggttaa atgttgtgtt gcgcgcctag aagatggaat tccacaattt cacttctgga 4380 acaagtacgc aatggcccgc agcgaagttc acaccctgaa agatgaaggt gggggaaatg 4440 tctaccagaa caagatcagg cgctatatcg tctatccaca tgaggcgaag aaatatgact 4500 gtggtgcctt ggccgtggct gtgatccaag gaattcctaa agtcatcgca atgcttgtat 4560 ctgggaatag aggtataacc tattcttctg taattccaaa ttacagttct tcctttgtta 4620 ggggagaagt accatatgta ccagaggatg ggttagtgac aagaggatat aggaaggtgg 4680 gctatttgcg tatgtctgac gcaccacacg ttccttcaaa gacttctttt atgaaggtgc 4740 cagacgaatt atgctttcca tatcctgatc ctaagcagcc tgccattctt agcgctgaag 4800 atgaacgctt gaagggaacc gtccatgaag gctatactcc aataagggat ggcatgaaga 4860 aatttgctga accaatgcac ttgctagagg aaaaactgct tgatgaagtt gcaggtgata 4920 tggttcagac gtggtatgat ccaggagaat ttcttgaaga tatttcttta gagcaggcca 4980 tcaatgggga ttcagaagaa gaatattttg atcccttggt gatggatacg tctgaaggat 5040 atcctgacgt cttaggtcgc aaacctggag aaaaaggaaa ggcgagattc tttgttgggg 5100 aaccaggaag cagggtcttc gtagctggtt gtaatcctga aaaggcctac taccagctag 5160 tggaagattc taaaaccaag gtgccttcct tggttagtat agaaacccct aaagatgaga 5220 gactgaaaag gagtaaaatc gatactcctg gtacgagatt gttttctgtg ttgcctttgg 5280 catacaatct cttactaaga gtaaaattct tgtctttctc tcgcctactg atgaaaaaga 5340 ggggccacct gccttgccag gtgggtatca atccttacag tcgtgaatgg accgatttgt 5400 atcaccgctt gggtgaactt tctgatatcg gatacaattg cgattataag gcttttgatg 5460 gcctaatcac ggaacaaatt ttgagtacta ttgctgacat gatcaatact gggtatcgcg 5520 accctattgg caataggcag aggaaaaatt tgctcctggc aatatgcgga cgcctctcca 5580 tctgtggaaa tcaagtgtat gccactgaag caggcatacc ttcaggatgt gctctcacag 5640 tagtgcttaa ttccattttc aaagaactac tgatgagata ttgcttcaag aaaatagttc 5700 cccctatgta caaggaatgt tttgacagat gtgtcgtgct tattacttac ggtgatgaca 5760 atgtctttac tgtggcacag tctgtcatgc agcatttcac tggcgatgcc ctgaagctgc 5820 aaatggcaaa aattggggtg actattactg atgggaaaga taaatctctt tccactattc 5880 cagctcgtcc actgttggaa ttagaatttt tgaaacgtgg atttgttaga agctctgggg 5940 gtatgataaa tgctcctttg gaaaaattgt caataatgag ttctctgatc catattagga 6000 gtgatggctc agacatgttg caaaagttat tggataacgt caatactgca cttgtcgagc 6060 tatatctaca tggtgataga gcttattttg aatcagttag agctttttac atggagaaac 6120 tccctcctgg cgcttataag gagctgacga cgtggttcca agctgaatca ttccatgagt 6180 gccagaaccc ccgagagagt ggctataaac cacaggggct tattgaaaaa agtcatggag 6240 cagcttttgc cagttttact caacaagctg gtacagagtt ggaaaaacat gatatttgcc 6300 ctggtttatc aattgcagga actaagtaca ttgccactga gaatgagatt gttttatctc 6360 ttagttcctt tttgcccggg gatagaaatg ccttcaagtt ggatctgcct tgtggagatg 6420 ggattgggcg tttgccctcc aaatgcagta tcttaaactt gagaaaaccg ggcttggtta 6480 tgagattgtg taagcgtgct caagatgaaa agaagacctt agtcattcgt gacgaaaggc 6540 catacattgg cgcatgggca gttgcttgca tatgtggaga aagttttggc ttcggacaac 6600 agagtgttct tacactctat gctaatttgt tgggaccaaa tcagaagaat ggcttagcta 6660 gttatttttc tgattttgag agtcccattc atattaagag agtccacgcc aaaacaaact 6720 cccatgaagg tggtgaagct ttgaaggaag tcttcaattt ttgtgagact attgtttata 6780 acgccactga tgcggatact aggaaagaga tgcttcgaaa tctaccagat gtctatccta 6840 gtattagtct tgttggagga gtttgcttcc ccaatgaagg aggggaacct ggagccctat 6900 tttctgacaa tgatgctctt atagcgagtc aaactccagg ggtttatgtg agcgaagcgt 6960 gcttaaagtg ctgtcatagg tgtgtaggtt ttaccaccaa aactgtgagc agtactgtgg 7020 cttttaagaa tagtcttttg aagacacatc ttaaaacttt gaggcgtatt cagactcact 7080 cgtgtgcgag aaggtaatcc tcctaattct tggtactggg ataaccaagt ttaaataacc 7140 cagtttctaa tgcttttcag gctctttgag gcattagaat attagagctt ttgtgtttta 7200 atttgcttta actggtttac tactttagtg tgtttcattc catgctttta gtggcgacag 7260 tgtgttgttt gtcctttgga cacacttgcc ctgttggacg caaaaagatt ttctttttct 7320 ttttactgtt ttgcaaatta t 7341 //