ID GQ332371; SV 1; linear; mRNA; STD; VRL; 3767 BP. XX AC GQ332371; XX DT 08-DEC-2009 (Rel. 103, Created) DT 08-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate WACF2142 segment RNA2 polyprotein mRNA, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3767 RX DOI; 10.1094/PHYTO-99-12-1394. RX PUBMED; 19900006. RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT "Genome diversity and intra- and interspecies recombination events in RT Grapevine fanleaf virus"; RL Phytopathology 99(12):1394-1402(2009). XX RN [2] RP 1-3767 RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT ; RL Submitted (27-JUN-2009) to the INSDC. RL Plant Pathology, Washington State University, Prosser, WA 99350, USA XX DR MD5; d1685675489922addb463e589dcd6b52. DR EuropePMC; PMC3673993; 23755117. XX FH Key Location/Qualifiers FH FT source 1..3767 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cultivar Cabernet Franc" FT /isolate="WACF2142" FT /mol_type="mRNA" FT /country="USA" FT /collection_date="2008" FT /db_xref="taxon:12274" FT CDS 229..3555 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D2IKR4" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D2IKR4" FT /protein_id="ACZ58631.1" FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSVEQWLAAINSDPSFRQTVKE FT DVQENRTEPTAIRMFSWKIGFGPIDNPEKCNWHFVLTGERPLQPTEPAKAQEVEVPPVK FT AVVPSPPPVPRPYFRPIGAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQGT FT PLKLSLVMKFAMLKHTTWRKWYDTSDERLLAAHPGGPCLPPPPPIQSPPSFRERLRETC FT RVKSCARAFALETSLGLNKAWVGLVNIPSTSVCCADGRTTGGQTIAQEADPLQHRVSTS FT VAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPP FT LRNAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAV FT VIDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQ FT YSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSLHYRTVASTVHQAQVQ FT GTTLRATMMGNTVVVSPEGSLVTGTPEARVDIGGGSSIRMVGPLQWESVEEPGQTFSIR FT SRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMISD FT FKGVQYEKWITAGLVMPIFKIVVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTL FT SVPHWLIHHKLGTFSCEIDYGKLCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAV FT VELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQVP FT MVGTTKVYNLNSALVSCVLGMGGTIRGKVHICAPIFYSIVLWVVSEWNGTTMDWNELFK FT YPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARLPV FT VVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSSTCRVSMGENP FT FAAMIACHGLHSGVLDLKFQWSLNTEYGKSSGSVTITKLVGDKATGLDGPSQIFAIQKL FT EGVSELLVGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFP FT V" XX SQ Sequence 3767 BP; 917 A; 791 C; 947 G; 1112 T; 0 other; atgaaaaatg tttacgtttt cttacgttac cgtgatttca ctttttcttt gccaagagtt 60 taagaaactc aaaagtgaaa ctgccaagag tttaagaaac tcaaaagcga agagtttaag 120 aaactcacca ttgcttttcc attcttttat tttgcgctct atttgtttag cattttattt 180 ggtttgtttg aaaagctttt gttttgtttt cattttcttt ttgcccttat gggcaaattt 240 tattattcca acaggcgact tgcctgttgg gctgctggga agaaccctca tcttgggggt 300 tccgttgaac aatggctggc ggccataaat tctgatccct ccttccgcca aactgttaag 360 gaggatgtcc aggagaaccg gactgagcct acggctatcc ggatgttctc ttggaagatt 420 gggttcgggc ccattgacaa tcccgagaaa tgcaattggc atttcgtcct tacaggcgag 480 agaccattgc agccgaccga gccggctaaa gctcaagagg tggaggtgcc acctgtgaag 540 gcagttgtgc cttcaccgcc ccctgttcca aggccttatt ttaggcctat tggggctttt 600 gcaccaaccc ggtccgggtt tattcgggcc actgtggaaa gactcacccg ggaacgggaa 660 gagtcgagag ctgcggcact ctttgccgaa ttgccattgg agtatcctca gggtacccct 720 ttgaagttga gcctggttat gaagtttgcc atgctcaagc ataccacttg gaggaagtgg 780 tatgacacca gtgatgagcg ccttttggct gctcatcctg gtggcccttg tcttcctcct 840 cctcccccaa tccaaagtcc tccttccttt cgcgagaggt tgagggaaac ttgcagggta 900 aaatcctgcg ccagggcttt tgccctggaa acctccctgg gccttaataa ggcctgggtg 960 ggcttagtga atatccccag cacttctgtg tgctgtgcgg atggaaggac taccgggggg 1020 caaacaattg ctcaagaagc tgaccctttg caacataggg ttagcacatc agttgccccc 1080 ggtagggcac agtggatctc cgagcgcaga caggctctgc gaaggagaga gcaagcgaat 1140 agcttgcagg gtcttgccgc tcaaacggac atgacttttg agcaggccag gaatgcctat 1200 cttggtgctg ccgatatgat cgagcaaggc ttaccgctac ttccccctct gcgtaatgct 1260 tatgccccta ggggtttgtg gaggggaccc tcaaccagag ccaactacac gttagatttt 1320 aggcttaatg gtattccgac tgggacaaat acattagaaa tattgtacaa tcctgtgtcg 1380 gaagaagaga tggaagagta ccgggataga ggcatgtcgg ctgtggtgat agatgcgcta 1440 gagatagcga taaatccatt cggtatgccc ggtaatccaa cggacttaac tgtcgtggca 1500 acgtatgggc atgagcgtga catgactcgt gctttcattg gttctgcctc tacctttctt 1560 ggaaatggtt tggcacgagc tattttcttt cctggcttgc aatatagtca ggaggaacca 1620 aggcgcgaat ctataattcg cctatatgtt gcctccacca atgctactgt ggacactgac 1680 tcagtcttgg cagccatcag tgttggtacc ttacgtcaac atgttggctc cctgcactat 1740 cggacagtgg ctagtactgt gcatcaggcc caagtgcaag gtacaacgct cagggctact 1800 atgatgggta atactgttgt agtgtcacct gaaggaagtc tggttactgg aacccctgaa 1860 gcaagagttg atataggggg tggttctagt attaggatgg tgggacctct gcaatgggag 1920 agtgtagagg aaccagggca aaccttctct atcagaagtc gctcacgatc tgtgaggatc 1980 gatagaaacg ttgatcttcc tcaacttgag gctgagccca gattgagctc gaccgtgaga 2040 ggattagccg gtagaggagt ggtttatatc cctaaggatt gtcaggcaaa tagatacttg 2100 ggcaccctga atatacgcga tatgatttca gattttaagg gtgtccagta tgaaaaatgg 2160 ataactgcgg ggttagtcat gcccattttc aagatagttg ttagactgcc tgcaaatgcc 2220 tttaccgggc tgacatgggt gatgagcttt gatgcttata atcggataac tagtagaatt 2280 actgctagtg cagatcctgt gtacacctta tcggtcccac attggcttat ccatcataag 2340 ttgggcacgt tctcatgtga aatagactat gggaaattgt gtggtcatgc catgtggttt 2400 aagtccacaa cattcgaatc cccgaggttg catttcacgt gtttaacggg caacaacaag 2460 gaattggcag cagactggca agctgttgta gaattatatg ctgaattgga agaggctact 2520 tcttttcttg ggaaaccgac tttggttttt gacccaggcg tttttaatgg caaattccaa 2580 ttcctgactt gccctcccat attctttgat ttaacagccg tcacggctct taagagcgct 2640 ggactgacat tgggacaggt tccaatggtt ggtactacca aggtttataa tctaaatagt 2700 gctcttgtga gttgtgttct gggcatggga ggtactatta gaggaaaggt acacatttgt 2760 gcgccaatct tttatagtat tgttttatgg gttgttagtg agtggaacgg gaccactatg 2820 gactggaatg aactctttaa atatcccggg gtgtatgtgg aagaggatgg aagctttgaa 2880 gtcaaaatcc gttctccata tcaccgaacg cctgctaggt tacttgctgg tcaaagtcag 2940 agggatatga gctctctgaa cttctacgcg atagcaggac ctatcgctcc atcgggtgag 3000 accgcacgac ttcctgtcgt tgtacaaatt gatgagatcg tgcgcccaga tctctcttta 3060 ccaagttttg aagatgatta ttttgtatgg gtggattttt ctgaattcac tctagacaaa 3120 gaagaaattg agattggttc tcgtttcttt gattttactt caagtacttg tagagtctct 3180 atgggagaaa atccgttcgc tgcaatgatt gcttgtcatg gattgcatag tggtgtttta 3240 gacctcaaat ttcaatggag tttaaacact gaatatggca agagcagtgg gagcgtcacc 3300 attacaaagc tggttggtga taaagccacg ggcctggatg gaccttcaca aattttcgcc 3360 atacaaaaac tagaaggagt ttcagaattg ttggttggga attttgcagg agcaaaccca 3420 aacactcatt tctcccttta tagtcgatgg atggcaatca aattagatca agcaaagagt 3480 attaaagtac tccgtgtttt gtgcaagcct cgcccaggtt tcagttttta tggaagaacc 3540 agcttcccag tctagggtat ctgactttaa aagacccaag tgtgtatgcg tgttttatta 3600 tttacatgtg taattttgtg ttttagtttg ctttaacttg tttactgctt tagtgtgttt 3660 aatttcatgc ttttagtggc gacagtgtgt tgtttgtcct ttggacacgc ttgccttgtt 3720 ggacgcaaaa agattttccc tttcttttta ctgttttgca aatttat 3767 //