ID GQ332368; SV 1; linear; mRNA; STD; VRL; 3776 BP. XX AC GQ332368; XX DT 08-DEC-2009 (Rel. 103, Created) DT 08-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate WAPN173 segment RNA2 polyprotein mRNA, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3776 RX DOI; 10.1094/PHYTO-99-12-1394. RX PUBMED; 19900006. RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT "Genome diversity and intra- and interspecies recombination events in RT Grapevine fanleaf virus"; RL Phytopathology 99(12):1394-1402(2009). XX RN [2] RP 1-3776 RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT ; RL Submitted (27-JUN-2009) to the INSDC. RL Plant Pathology, Washington State University, Prosser, WA 99350, USA XX DR MD5; c4d969e42143a1710b58f9a345646451. DR EuropePMC; PMC3314827; 22218961. XX CC GenBank Accession Numbers GQ332368 and GQ332372 represent sequences CC from the 2 segments of Grapevine fanleaf virus isolate WAPN173. XX FH Key Location/Qualifiers FH FT source 1..3776 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cultivar Pinot Noir" FT /isolate="WAPN173" FT /mol_type="mRNA" FT /country="USA" FT /collection_date="2008" FT /db_xref="taxon:12274" FT CDS 232..3564 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D2IKR1" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D2IKR1" FT /protein_id="ACZ58628.1" FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSVEQWLAAINTDPSFRQTVKE FT DVQENREQPTAVRMFSWKIGFGPIDNPEKCNWHFVLTGERPAQPSRPVKADEVVVVPQP FT KKVVIPSPPSPPAPYFRAVGAFAPTRSGYIRATVERLTREREESRAAALFAELPLEYPQ FT GSPLKLSMAMKFAMVKHTTWRKWYDTSDERLLAAHPGGPCLPPPPPIQSPPSFYEKVRE FT FCRKKSCAKAFALETSLGLNKAWVGIVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVS FT TSVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLL FT PPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMS FT AVVIDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPG FT LQYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQ FT VQGTTLRATMMGNTVVVSPEGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFS FT IRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDMI FT SDFKGVQYEKWITAGLVMPIFKIIIRLPANAFTGLTWVMSFDAYNRITSRITASADPVY FT TLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQ FT AVVELYTELEEATSFLGKPTLVFDPGVFNGRFQFFTCPPIFFDLTAVTALKSAGLTLGQ FT VPMVGTTKVYNLNSTLVSCVLGMGGTIRGKVHICAPIFYSIVLWVVSEWNGTTMDWNEL FT FKYPGVYVEEDGNFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARL FT PIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEELEIGSRFFDFTSNTCRVSMGE FT NPFAAMIACHGLHSGVLDLKLQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSQVIAMQ FT KLEGVTELLIGNFAGANPNTHVSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTS FT FPV" XX SQ Sequence 3776 BP; 919 A; 800 C; 961 G; 1096 T; 0 other; atgaaaaatt tctacggctt cttacgttac cgtgatttca cttttccttt gtcaagagtt 60 taagaaactc aaaagtgaaa ctgccaagag tttaagaaac tcaaaagcga agagtttaag 120 aaactcatca ttgcttttcc gttcttttat tttgcgcttt atttgtttag cattttattt 180 agtttgtttg aaaagctttt gttttgtagt ttttattttc tttttgccct tatgggcaaa 240 ttttattatt ccaacaggcg acttgcctgt tgggctgctg ggaagaaccc tcatcttggg 300 ggttctgtcg aacaatggct ggcggccatt aatactgatc cctccttccg ccaaactgtt 360 aaggaggatg tccaggaaaa cagagaacag ccaactgctg ttcgaatgtt ttcttggaag 420 attgggttcg ggcccattga caaccccgaa aaatgcaact ggcatttcgt cctcacaggc 480 gaaaggccag cgcagccgtc ccggccggtt aaagccgatg aggttgtggt ggtgccacaa 540 ccgaagaagg tggtgattcc atcaccacct tctcccccag ctccctactt tagggctgtt 600 ggggcttttg caccgacccg gtccgggtat attcgggcca ctgtggaaag actcacccgg 660 gaacgggaag agtcgagagc tgcggcactc tttgccgaac tgccattgga gtaccctcag 720 ggttctcctc tgaagttgag tatggcaatg aaatttgcca tggtcaaaca taccacttgg 780 aggaagtggt atgacaccag tgatgagcgc cttttggcag ctcatcctgg tggcccctgt 840 ctccctcccc ctcccccaat ccaaagcccc ccttcttttt atgagaaggt aagggaattt 900 tgcaggaaga agtcctgcgc caaggctttc gccttggaga cctccctggg ccttaataag 960 gcttgggtgg gtatagtgga catccccagt acttctgtgt gctgtgcgga tgggaggacc 1020 accggtgggc aaacaattgc tcaagaagct gaccctttgc aacatagggt cagcacgtca 1080 gtagcccccg gtagggcaca atggatctct gaacgcagac aagctctgcg aaggagagag 1140 caggcaaata gcttgcaagg ccttgctgct caaactgata tgacttttga gcaggccagg 1200 aatgcttatc ttggtgctgc tgatatgata gagcaaggtc taccgctgct tccccctctg 1260 cgcagcgctt atgcccctag gggcttgtgg aggggaccct caaccagagc caattacacg 1320 ttggatttca ggctcaatgg tattccgact gggacaaaca cattggaaat attgtataat 1380 cccgtgtcgg aagaagagat ggaagagtat cgggataggg gcatgtcagc cgtggtgatt 1440 gatgcgctag aaatagccat aaacccgttt ggcatgcctg ggaacccaac agacttgacc 1500 gtcgtagcaa catatgggca tgagcgtgac atgacacgtg cctttattgg gtctgcttcc 1560 acattcttag ggaatgggtt agctagagcc attttctttc ctggtttgca atatagccag 1620 gaggaaccaa ggcgcgaatc tataattcgc ttgtatgttg cttctactaa tgccactgta 1680 gacactgatt cagtcttggc agccattagt gttggcacct tgcgtcaaca tgttggctcc 1740 atgcactatc gtacggtggc tagtactgtg caccaggccc aggtgcaggg aacaacactc 1800 agggccacta tgatgggcaa taccgttgta gtgtcacctg agggaagctt ggttactgga 1860 acccctgaag caagagttga aattgggggt ggttctagta ttagaatggt ggggccttta 1920 cagtgggaaa gtgtagagga accagggcaa accttctcta tcaggagtcg ttcacggtct 1980 gtgaggattg atagaaacgt tgatcttcct caacttgagg cagagcccag attgagctca 2040 accgtgagag gactagctgg taggggggta atttatattc ccaaggattg ccaggcaaat 2100 aggtacttgg gcaccctaaa catacgtgat atgatctcag atttcaaggg tgtccagtat 2160 gaaaagtgga taactgcagg attagtcatg cctattttca agataattat taggctacct 2220 gcaaatgcct ttactggatt gacgtgggta atgagctttg acgcttataa ccggattact 2280 agtagaatca ctgctagtgc tgatcccgtg tacaccctgt cggttccgca ttggcttatc 2340 catcataagt tgggcacgtt ttcatgtgag atagactacg gggagttgtg tggtcatgcc 2400 atgtggttta aatccacgac cttcgaatct ccaagattac atttcacatg cttaacgggc 2460 aacaacaaag agttggcggc agactggcaa gctgtcgtag aattgtacac tgaattggaa 2520 gaagctactt cttttcttgg gaaacctact ttggtttttg acccaggtgt ctttaatggc 2580 agattccagt tttttacttg ccctcccata ttctttgatt taacggccgt cacggctctt 2640 aagagtgctg ggttgacgtt gggacaggtc ccaatggttg gcaccactaa ggtttataat 2700 ctaaacagca ctctcgtgag ttgtgttttg ggtatgggag gtactatcag agggaaggta 2760 cacatctgtg caccaatctt ctatagtatt gttttgtggg tcgttagtga gtggaacggg 2820 accactatgg attggaatga acttttcaaa tatcccgggg tgtatgtgga agaggacgga 2880 aactttgaag ttaaaattcg ctccccatat caccgaacgc ctgctagatt gcttgctgga 2940 caaagccaga gggatatgag ctccctaaat ttttatgcaa tagcaggacc tatagctccg 3000 tcgggtgaga ctgcacgact tcctattgtt gtacagattg acgaaatcgt gcgcccagac 3060 ctttctctac caagttttga ggatgattat tttgtatggg tggatttttc tgagttcact 3120 cttgacaaag aagaacttga gattggttct cgtttcttcg attttacttc aaatacttgt 3180 agagtgtcta tgggagaaaa cccgtttgct gcaatgatcg cttgccatgg attacatagt 3240 ggtgtgttgg atctcaaact ccagtggagt ttgaatactg aatttggcaa gagcagtggg 3300 agcgttacca ttacgaaact ggtgggtgat aaagccacgg gtctggacgg accttctcag 3360 gttattgcca tgcagaagct agaaggagtt acagagttgt taattggaaa ttttgcagga 3420 gcaaacccaa acactcatgt ctctctctat agccgatgga tggcgattaa attggaccaa 3480 gcaaagagta tcaaagtact ccgcgtgtta tgtaagcctc gtccaggttt tagtttttat 3540 ggaagaacca gtttccccgt ttagggtgtt cagttcttga agacccaggt gtgcatatgt 3600 actttaatag ttgtgtgcgt tattttgtgt tttaatttgt tttgacttgt ttactgcttt 3660 agtgtgtttt atttcatgct tttagtggcg acagtgtgtt gtttgtcctt tggacacact 3720 tgccctgttg gacgcaaaaa gattttcttt ttctttttac tgttttgcaa atttat 3776 //