ID GQ332366; SV 1; linear; mRNA; STD; VRL; 3753 BP. XX AC GQ332366; XX DT 08-DEC-2009 (Rel. 103, Created) DT 08-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate WAPN6132 segment RNA2 polyprotein mRNA, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3753 RX DOI; 10.1094/PHYTO-99-12-1394. RX PUBMED; 19900006. RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT "Genome diversity and intra- and interspecies recombination events in RT Grapevine fanleaf virus"; RL Phytopathology 99(12):1394-1402(2009). XX RN [2] RP 1-3753 RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.; RT ; RL Submitted (27-JUN-2009) to the INSDC. RL Plant Pathology, Washington State University, Prosser, WA 99350, USA XX DR MD5; 79528d302167bfc56d841e70bd1c5737. DR EuropePMC; PMC3314827; 22218961. XX CC GenBank Accession Numbers GQ332366 and GQ332373 represent sequences CC from the 2 segments of Grapevine fanleaf virus isolate WAPN6132. XX FH Key Location/Qualifiers FH FT source 1..3753 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cultivar Pinot Noir" FT /isolate="WAPN6132" FT /mol_type="mRNA" FT /country="USA" FT /collection_date="2008" FT /db_xref="taxon:12274" FT CDS 212..3541 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D2IKQ9" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D2IKQ9" FT /protein_id="ACZ58626.1" FT /translation="MGKFYYSNRRLAAYCLGKDGRGTYQQWLQCMEDPSFRKEVKEDVQ FT RNRAEPSVIRVFERPLGQGPVEGSAGIAWHFIVHGPSLGLVPSPRPTKADEVVVVPQPK FT KVVIPSPPPPPVPYFRAIGAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQG FT APLKLSLAMKFAMLKHTTWRKWYDTSDERLLIGHPGGPCLPPPPPIQSLPSFQERVREF FT CRMKSCAEAFALETSLGLNRAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVST FT SVAPGRAQWISERRQALRRREQANSLQGLAAQTEMTFEQARNAYLGAADMIEQGLPLLP FT PLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMDEYRDRGMSA FT VVIDALELAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGL FT QYSQEEPRRESLIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVANAVHQAQV FT QGTTLRATMMGNTVVVSPEGSLVTGTPDARVEMGGGSSMRMVGPLQWESVEEPGQIFSI FT RSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVHIPKDCQANRYLGTLNIRDMIS FT DFKGVQYEKWITAGLVMPIFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPIYT FT LSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQA FT VVELYAELEEANSFLGKPTLVFDPGLFNGRFQFLTCPPIFFDLTAVTAFKSAGLTLGQV FT PMVGTTKVYNLNSALVSCVLGLGGTIRGKVHICAPIFYSIVLWVVSEWNGTTMDWNELF FT KYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARLP FT VVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGEN FT PFAVMIACHGLHSGVLDLKLQWSLNTEFGKSSGSITITQLVGDKATGMDGPSQIFAMQK FT LEGVAELLVGNFAGANPNTHCSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSF FT PV" XX SQ Sequence 3753 BP; 892 A; 807 C; 970 G; 1084 T; 0 other; atgaaaaatt tttacaggtt cttacgttac cgtgattgca gtctttctcc gtgaagagtt 60 taagaaactc aagattgaaa tcccaagcga agagtttaag aaactcacca ttgctttttc 120 tgcctttcac cttgcgcttt atttgtttag catcttgtta ggttgtttta aaaagctttt 180 gttttgtttt tttaaaaata tttgtgccct tatgggcaaa ttttactaca gtaatcggcg 240 gctggccgct tactgcctcg gcaaggatgg ccgaggtacc taccagcaat ggctccagtg 300 tatggaggat ccttccttta ggaaggaggt caaagaggat gttcagcgca atcgcgctga 360 accttctgtc attagggtgt ttgagcgccc tcttggccag ggccctgtcg aagggtccgc 420 tggaatagcc tggcacttta tagtgcacgg gccctcattg ggacttgtcc cgtcgccccg 480 gccgactaaa gccgatgagg ttgtggtggt gccgcaaccg aagaaggtgg tgattccatc 540 accacctcct cccccagttc cctattttag ggctattggg gcttttgcac caacccggtc 600 cgggtttatt cgggccactg tggaaagact cacccgggaa cgggaagagt cgagagctgc 660 ggcactcttt gccgaactgc cattggagta ccctcagggc gctcctctga agttgagtct 720 ggcgatgaaa tttgccatgc tcaaacatac cacttggagg aagtggtatg acaccagtga 780 tgagcgcctt ttgataggtc atcctggtgg tccctgtctt cctcctcctc ccccaatcca 840 aagtcttccc tcctttcaag aaagggtaag ggaattttgc aggatgaagt cctgcgccga 900 ggcttttgcc ttggaaacct ccctaggcct caacagggcc tgggtaggtt tagtggatat 960 ccccagtact tctgtgtgct gtgcggatgg gaggactact ggcgggcaga cgatcgctca 1020 agaagctgat cctttgcaac atagggtcag cacatcagta gcccccggta gggcgcaatg 1080 gatctctgag cgcagacagg ctctgcggag gagagagcag gcaaatagct tgcagggtct 1140 tgctgctcaa actgaaatga cttttgagca ggccaggaat gcttatcttg gtgctgctga 1200 catgatagag caaggcttgc cgctgcttcc ccctctgcgc agcgcttatg cccctagggg 1260 tttgtggagg ggaccttcaa ctagagccaa ttacacgtta gattttaggc tcaatggtat 1320 tccgactggg acaaacactc tggaaatatt gtacaatccc gtgtcggaag aagagatgga 1380 tgagtatcgg gacaggggta tgtcggccgt ggtaattgac gcgctagaac tagccataaa 1440 cccatttggc atgcctggga acccgacgga cttgactgtc gtagcaacat acgggcatga 1500 gcgtgacatg acgcgtgcct ttattggatc tgcttccaca ttcttaggga atgggttagc 1560 cagagccata ttctttcctg gcttgcaata tagtcaggag gaaccacgtc gcgaatcttt 1620 aattcgcctg tatgttgctt ccactaatgc cactgtggac actgattcgg ttttggcagc 1680 cattagcgtt ggcactctgc gtcaacatgt tggctctatg cattatcgta cagtggctaa 1740 tgctgtacac caggcccagg tacaaggaac aacgctcagg gctactatga tgggcaatac 1800 tgtcgtagtg tcgcctgaag gaagcctggt tactgggacc cctgatgcga gagtcgaaat 1860 ggggggtggt tccagtatga gaatggtggg acccctacag tgggagagtg tcgaggaacc 1920 agggcaaatc ttttccatca ggagtcgttc gcggtctgtg aggattgaca gaaacgttga 1980 tctaccacaa cttgaggctg agcccagact gagctcgacc gtgagaggat tagctggtag 2040 aggagtggtt cacatcccta aggattgcca ggcaaatagg tacttgggca ccctgaatat 2100 acgtgatatg atctcagact ttaagggtgt tcagtatgaa aagtggataa ctgcaggact 2160 agtcatgcct atttttaaga tagttattag gctacctgca aatgccttta ctggattgac 2220 atgggtgatg agctttgatg cttacaatcg gataactagt agaatcactg ctagtgcaga 2280 tcctatatac accctgtcag tcccacactg gcttatccat cataagttgg gcacgttttc 2340 atgtgagata gattatgggg aactgtgtgg tcacgctatg tggttcaagt ccacaacatt 2400 tgaatctcca aggctacatt ttacgtgcct gacgggcaac aataaagagt tggcggcaga 2460 ctggcaagct gtcgttgaac tatatgctga attggaagag gccaattctt ttcttgggaa 2520 accaactcta gtttttgacc caggtctttt taatggcaga ttccaatttc ttacttgccc 2580 tcctattttc ttcgacttaa cggccgtcac ggcttttaag agtgctgggc tgaccttggg 2640 acaagttcca atggttggca ctaccaaggt ttataatctg aatagcgctc ttgtgagttg 2700 tgtcttgggt ctgggaggta ctattagagg aaaggtgcac atctgtgcac caatcttcta 2760 tagtattgtt ttgtgggtcg ttagtgaatg gaatgggact accatggact ggaatgaact 2820 tttcaaatat cccggggtgt acgtggaaga ggatggaagc tttgaagtta aaattcgctc 2880 tccatatcac cggacacctg ctagattgct tgctggtcaa agtcagaggg acatgagctc 2940 tctaaatttt tatgcgatag caggacctat tgctccatcg ggcgagactg cgcggcttcc 3000 tgttgtcgtg cagattgatg aaattgtgcg cccagacctc tctctaccaa gttttgaaga 3060 tgattatttt gtgtgggtag atttttctga atttaccctt gacaaagaag aaattgagat 3120 tggttctcgt ttcttcgatt ttacttcaaa tacttgtaga gtgtctatgg gagaaaatcc 3180 atttgccgta atgattgctt gccatgggtt gcatagtggt gttttggacc tcaaactcca 3240 atggagtttg aatacagaat ttggcaagag tagtgggagc atcactatca cgcagctggt 3300 gggtgataaa gccacgggta tggacggacc ttcccaaatc tttgccatgc aaaaactaga 3360 aggagttgca gaattgttgg ttggtaattt tgcaggagca aacccaaaca ctcactgctc 3420 tctctatagt agatggatgg caattaaatt ggatcaagca aagagtatca aagtactccg 3480 cgttttgtgt aagccccgcc cgggttttag tttttatgga agaaccagct ttccagtcta 3540 gggtttctga ctttaaaaga cccagttata cataggcgtt ttattagtta tatgtgttat 3600 tttgtgttat aatttgcttt aacttgttta ctactttagt gtgtttattt ccatgctttt 3660 agtggcgaca gtgtgttgtt tgtcctttgg acacacttgc cttgttggac gcaaaaagat 3720 tttccttttc tttttactgt tttgcaaatt tat 3753 //