ID   GQ330541; SV 1; circular; genomic DNA; STD; VRL; 1361 BP.
XX
AC   GQ330541;
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DT   29-JUL-2009 (Rel. 101, Created)
DT   22-SEP-2011 (Rel. 110, Last updated, Version 3)
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DE   Pepper leaf curl virus satellite DNA beta isolate Varansi, complete
DE   sequence.
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KW   .
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OS   Pepper leaf curl virus satellite DNA beta
OC   Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite.
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RN   [1]
RP   1-1361
RX   DOI; 10.1007/s13337-011-0022-7.
RX   PUBMED; 23637491.
RA   Namrata J., Saritha R.K., Datta D., Singh M., Dubey R.S., Rai A.B., Rai M.;
RT   "Molecular Characterization of Tomato leaf curl Palampur virus and Pepper
RT   leaf curl betasatellite Naturally Infecting Pumpkin (Cucurbita moschata) in
RT   India";
RL   Indian J Virol 21(2):128-132(2010).
XX
RN   [2]
RP   1-1361
RA   Jaiswal N., Saritha R.K., Rai A., Singh M., Datta D., Dubey R.S., Rai M.;
RT   "Association of satellite DNA beta with yellow vein mosaic disease of
RT   pumpkin";
RL   Unpublished.
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RN   [3]
RP   1-1361
RA   Jaiswal N., Saritha R.K., Rai A., Singh M., Datta D., Dubey R.S., Rai M.;
RT   ;
RL   Submitted (26-JUN-2009) to the INSDC.
RL   Division of Crop Protection, Indian Institute of Vegetable Research,
RL   Varanasi, P/O Jakhini (Shahanshapur), Varanasi, Uttar Pradesh 221305, India
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DR   MD5; 14ad1fa23beb751323dd80fee9e6ce1a.
DR   EuropePMC; PMC3550709; 23637491.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1361
FT                   /organism="Pepper leaf curl virus satellite DNA beta"
FT                   /host="pumpkin"
FT                   /isolate="Varansi"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collected_by="N. Jaiswal"
FT                   /collection_date="Dec-2008"
FT                   /clone="01"
FT                   /db_xref="taxon:436242"
FT   CDS             complement(201..557)
FT                   /codon_start=1
FT                   /product="betaC1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:C7EZE2"
FT                   /protein_id="ACT78997.1"
FT                   /translation="MTIKYTNEKGMIFTIDVKINDDNSILVRIEFCSTRSPALAKKIFM
FT                   IPYGHDGIIPPFDFNNLEEGIHNILKVIYRDCPVGDFRQKDMVEAIDILMMHEAPLVDI
FT                   RIGDEYDVCTCLCV"
XX
SQ   Sequence 1361 BP; 498 A; 268 C; 277 G; 318 T; 0 other;
     accgtgggcg aggggggtct ttggcgttcc aagtgggccc cacaatatcc aagtgaagaa        60
     aagtggactg gggcaatgca attgggcctt aaaagaaatg gggttggccc agtagattcg       120
     tgacggggcc aatatattca aataacaaag gggctcacaa ccaaaaaaaa gattttattc       180
     atgtcaaata cattacacac tcacacacac aaacacgtac atacatcata ttcatcccct       240
     atacgtatat caactaatgg ggcctcatgc atcatcaata tatcaatggc ctctaccata       300
     tccttttgtc gaaaatcccc aacaggacaa tccctgtaaa tgaccttcaa aatattatgt       360
     atcccttcct ccaagttgtt gaagtcgaaa ggtggtatga tcccatcatg gccgtatggg       420
     atcatgaaga tcttcttcgc cagggctggt gatcttgtcg agcagaattc aatccggaca       480
     agaattgaat tgtcgtcgtt gatcttcacg tcgatggtaa atatcatacc cttctcgtta       540
     gtatacttga tcgtcatttc catgtcaata cgaataacat atgagatgaa tagtcttaaa       600
     tagcacccat atctttggct atttggacat aataaataca cggggttcaa taattatcat       660
     atgaatatca gtagccatac atagggtcga tatttacatt actatcaacc aagttcaaga       720
     aaaaaggaaa aaaagaaaac ttaaccatga aaggattaag tcgagaaaaa taaaaaaaag       780
     aaataaaggg aaagaagaac attaatcaaa tgaaagtgaa aaaaaataaa aaaaaatata       840
     tgaacaggaa atgaaaaaca caagagtaaa aagtaaaacc agttgagaaa atctgggaga       900
     tcagcgacaa agcatgaaaa aacaaaccac ggaacaagta tgagcaaaaa agagaaaaca       960
     caagagcaaa aaaatagcgt ttacaaaaag tttcagaaag tccgtacata gtaatcaatc      1020
     attaattcct gagcagtaaa tgtgaataaa attaacccaa ggggttaatt ttggaggcac      1080
     caataggtaa atgagacccc ttatgaggta ccgatatatc gctgtctcgg agagagaaat      1140
     aaatcccgga tcccgaaaat acccgtaatt ccgagtccgg aaggcacgtg ggactgcgct      1200
     agaacaacta accctctttc tccgaaaact caccggatcc ccagaactgg ctgattccgg      1260
     tgtgaattta cgacacgcgc ggcggtgtgt acccctcgga gggtaaaata gagggctttc      1320
     ccgaggccgg gaatttcttg ggtcgccgac gttgtaatat t                          1361
//