ID   GQ280377; SV 1; linear; genomic RNA; STD; VRL; 1874 BP.
XX
AC   GQ280377;
XX
DT   22-JUL-2009 (Rel. 101, Created)
DT   22-JUL-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Sclerotinia sclerotiorum partitivirus S segment 1, complete sequence.
XX
KW   .
XX
OS   Sclerotinia sclerotiorum partitivirus S
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1874
RA   Liu H., Fu Y., Jiang D.;
RT   "Molecular Characterization of a Novel Partitivirus in Sclerotinia
RT   sclerotiorum strain Sunf-M";
RL   Unpublished.
XX
RN   [2]
RP   1-1874
RA   Liu H., Jiang D., Fu Y.;
RT   ;
RL   Submitted (17-JUN-2009) to the INSDC.
RL   Plant Pathology, College of Plant Science and Technology, Huazhong
RL   Agricultural University, Shizishan No. 1, Wuhan, Hubei 430070, P.R. China
XX
DR   MD5; 4b4359d762ef99cf6bbb9b5503ea4817.
DR   EuropePMC; PMC3483285; 22716092.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1874
FT                   /organism="Sclerotinia sclerotiorum partitivirus S"
FT                   /segment="1"
FT                   /host="Sclerotinia sclerotiorum strain Sunf-M"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:659497"
FT   CDS             86..1828
FT                   /codon_start=1
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="RdRp"
FT                   /db_xref="GOA:C7ENF4"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:C7ENF4"
FT                   /protein_id="ACT55329.1"
FT                   /translation="MPALNLRYLFSISRSEMKKIRSSHTKVSPREEATRFSILKHAILK
FT                   HGSVGLLNQVLLGKRRSDASDERLIQDFHEFEQPVHPVPRDKHYLRALRVTEKLMKPAK
FT                   TLHPISFPDLRYYPWTKNVSAEAPYNFEKKYEELLRDKQRLGEIETATATFHNLEDEIF
FT                   EDNRYLIHKIKEGDSQFWDKDGKPRPYYHTTLHARAHVVGHEDADKIRAVFGVPKLLLM
FT                   AENMFIWPLQAYYLNQDTTKHHLLWGNEIMKGGWKKLWGQLQNGRISRTILSLDWSEFD
FT                   KRALHEVIDDVHSMWKSWFDFTHYEPTIFYEKGEIPEPHRRIENLWIWMTDMVKHYPIL
FT                   QPDGKVYQWTRNGIASGFQQTQLLDSFVNMIMLLTVLSANGINIEHPDFWIKVQGDDSL
FT                   ISIVERRFQMFGISYLDTLADLASYYFNAKLSVKKSFISDTPQGQYVLGYFNHYGIPYR
FT                   LDDDLLSHLVFPERPQRLEETAASCVGIAMASMGCSKVVYSICDDAYTFITKTLRRPAK
FT                   AGSLFWLERAFGYEMPNIAKMPTFEECLYASYDIPVRTENMKQRLWPTNAKAKNGFYFL
FT                   RHLC"
XX
SQ   Sequence 1874 BP; 596 A; 469 C; 343 G; 466 T; 0 other;
     agattaatta tcttagtcca ctttctaagt tcaacgaaaa ttaaatcaaa aagctcttaa        60
     ccacacagat cttttaaaac taacaatgcc tgcccttaac ctacgatacc ttttctcgat       120
     ctctcgatct gagatgaaga agattcgctc ttctcacacg aaggtctcac cacgtgaaga       180
     agcaactcgc ttctcaattt taaagcacgc tattctcaag cacggttcag tcggccttct       240
     caatcaagtc cttctcggta aacgtcgttc tgacgcttct gatgaacgtc taattcaaga       300
     ctttcatgaa ttcgaacaac ctgttcaccc tgtgccacga gacaaacact acctacgcgc       360
     actacgagtc actgaaaagc tgatgaaacc agcaaagact ctacacccga tatctttccc       420
     tgatctaagg tactatcctt ggacaaagaa cgtatctgct gaggctccgt ataacttcga       480
     aaagaagtac gaagaactac tcagagataa acaacgtctg ggagaaatcg aaaccgccac       540
     tgccaccttc cacaatctag aagatgaaat cttcgaagat aaccgctatc ttattcacaa       600
     gataaaagaa ggagactccc aattttggga taaagacgga aaaccgcgcc cttactatca       660
     caccacccta cacgcaagag cacatgttgt aggacacgaa gacgccgata aaattcgagc       720
     tgtttttgga gttccaaagc tattattaat ggctgaaaac atgttcatct ggccactaca       780
     agcctactat ctcaaccagg atacgaccaa acatcaccta ctctggggaa acgagataat       840
     gaaaggcggc tggaagaaac tctggggaca acttcaaaat ggaagaatct ctagaaccat       900
     actctctctt gactggtctg agttcgataa acgagctcta cacgaagtga tagatgacgt       960
     ccactccatg tggaaatctt ggttcgactt cactcactat gagccgacca ttttctacga      1020
     aaaaggagag attccggaac cacaccgtcg aatcgaaaac ctctggatat ggatgaccga      1080
     catggtcaaa cactatccca tcctccaacc ggatggaaag gtttatcaat ggacaagaaa      1140
     cggaattgca tctggattcc aacagacgca gctcctcgat tcattcgtta atatgattat      1200
     gcttttaaca gtactatcag cgaacggaat caacattgaa catcctgact tttggatcaa      1260
     agttcaaggc gatgactcac tcatttcaat cgtcgaacgc agatttcaaa tgttcggaat      1320
     ttcataccta gatacactag cagacctcgc cagctactac ttcaacgcaa aactctctgt      1380
     gaagaaaagc ttcatctctg acactcctca aggacaatac gtacttggtt acttcaacca      1440
     ttacggtata ccctatcgtt tagatgatga tctactttct caccttgtgt tccctgaacg      1500
     tcctcaacga cttgaagaaa ccgccgcatc atgcgtcggc atagctatgg cctccatggg      1560
     ctgttccaaa gtggtctatt ccatttgtga cgatgcatac acattcatta ccaaaacact      1620
     gcgacgacct gcgaaagctg ggtccctatt ttggcttgaa cgtgcattcg gttacgaaat      1680
     gccaaacatc gcaaagatgc caacctttga agaatgtctg tacgctagct acgacatccc      1740
     tgttcgaact gagaacatga aacaaagatt gtggcctacc aatgcgaaag ccaagaacgg      1800
     attctacttt ctccgtcact tatgttgagc cgaaagctcg gtaagttata taattgaaaa      1860
     aaaaaaaaaa aaaa                                                        1874
//