ID GQ277655; SV 1; linear; genomic RNA; STD; VRL; 6325 BP. XX AC GQ277655; XX DT 23-JUL-2009 (Rel. 101, Created) DT 24-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE Cucumber green mottle mosaic virus isolate GX, complete genome. XX KW . XX OS Cucumber green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6325 RA Li H., Wu Z., Sheng J., Cheng Q.; RT "The coding region sequence of cucumber green mottle mosaic virus isolated RT from GuangXi in China"; RL Unpublished. XX RN [2] RP 1-6325 RA Li H., Wu Z., Sheng J., Cheng Q.; RT ; RL Submitted (16-JUN-2009) to the INSDC. RL Institute of Plant Virology, Fujian Agriculture and Forestry University, RL FuZhou, FuJian 350002, China XX DR MD5; bded41766ee2f80bf3979f57477e1e27. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6325 FT /organism="Cucumber green mottle mosaic virus" FT /host="Cucumis sativus L." FT /isolate="GX" FT /mol_type="genomic RNA" FT /country="China:GuangXi" FT /collection_date="May-2007" FT /db_xref="taxon:12235" FT CDS 1..4947 FT /codon_start=1 FT /transl_except=(pos:3433..3435,aa:OTHER) FT /product="186K protein" FT /note="readthrough protein" FT /db_xref="GOA:C7EN47" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C7EN47" FT /protein_id="ACT64893.1" FT /translation="MANINEKINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMVTQHVQRHKGSGGCRPLPT FT FQIDAFRRYDNSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSSVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSNTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGSEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDRKNWRRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKVFKFDA FT VYVDEGLMVHTGLLNFALKISGCKRAFIFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTKXQLMQNSLYVHRNIFLPVSKTG FT FYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQPCRLTLSNLDPVPALVKSEAQ FT NFLIPVLRTACERPRIPGLLENLVAMIKRNMNTPDLAGTVDITNMSISIVDNFFSSFVR FT DEVLLDHLDCVRASSIQSFSDWFSCQPTSAVGQLANFNFIDLPAFDTYMHMIKRQPKSR FT LDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTKFLSMVDSSKFFFYTRKKPEDLQE FT FFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMAIWEKLGLDDILAWMWSMGHKRTIL FT QDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMLPLDKCFKASFCGDDSLIYLPK FT GLEYPDIQATANLVWNFEAKLFRRKYGYFCGKYIIHHANGCIVYPDPLKLISKLGNKSL FT VGYEHVEEFRISLLDVAHSLFNGAYFHLLDDAIHELFPNAGGCSFVINCLCKYLSDKRL FT FRSLYIDVSK" FT CDS 1..3435 FT /codon_start=1 FT /product="129K protein" FT /note="RNA replicase" FT /db_xref="GOA:C7EN48" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C7EN48" FT /protein_id="ACT64892.1" FT /translation="MANINEKINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMVTQHVQRHKGSGGCRPLPT FT FQIDAFRRYDNSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSSVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSNTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGSEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDRKNWRRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKVFKFDA FT VYVDEGLMVHTGLLNFALKISGCKRAFIFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTK" FT CDS 4934..5728 FT /codon_start=1 FT /product="29K protein" FT /note="MP" FT /db_xref="GOA:C7EN49" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:C7EN49" FT /protein_id="ACT64894.1" FT /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSVV FT KAQSYESLVPVKLLRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHSVA FT EGTICKFSAPATVREFSVRFIPNYSVVAADALRDPWSLFVRLSNVGIKDGFHPLTLEVA FT CLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARDPSYR FT SRSQSVGGRGKRHSKPSNRRLDSASEESSSVSFEDGLQSDHT" FT CDS 5703..6188 FT /codon_start=1 FT /product="17.3K protein" FT /note="CP" FT /db_xref="GOA:Q77G05" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77G05" FT /protein_id="ACT64895.1" FT /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSF FT RESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPT FT TAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSKA" XX SQ Sequence 6325 BP; 1615 A; 1225 C; 1520 G; 1965 T; 0 other; atggcaaaca ttaatgaaaa aatcaacaac caacgcgacg ccgcggccag cgggagaaac 60 aatctcgtta gccaattggc gtcaaaaagg gtatatgacg aggctgttcg ctcgttggat 120 catcaagaca gacgcccaaa aatgaacttt tctcgtgtgg tcagcacaga gcacaccagg 180 cttgtaactg atgcgtatcc ggagttttcg attagcttta ccgccaccaa gaactcagta 240 cactcccttg cgggtggtct gaggctcctt gagctggaat atatgatgat gcaagtgccc 300 tacggttcac cttgttatga catcggcggt aactatacgc agcacttgtt caaaggtaga 360 tcatatgtgc attgctgcaa tccgtgcctg gatcttaaag atgttgcgag gaatgtgatg 420 tacaacgata tggtcacaca acatgtacag aggcacaaag gatctggcgg gtgcagacct 480 cttccaactt tccaaataga tgcattcagg aggtacgata attctccctg tgcagtcacc 540 tgttcagacg ttttccaaga gtgttcctat gattttggga gtggtaggga taatcatgca 600 gtctcgttgc attcaatcta cgatatccct tattcttcga tcggacctgc tcttcatagg 660 aagaacgtgc gagtttgtta tgcagccttt cacttctcgg aggcattgct tttaggttcg 720 tctgtgggta atttaaatag tattggggct cagtttaggg tcgatggtga tgatgtgcat 780 tttcttttta gtgaagagtc cactttgcat tatactcata gtttagaaaa tattaagtta 840 atcgtgatgc gtacttattt tcctgctgat gataggttcg tgtacattaa agagtttatg 900 gttaagcgtg tggatacttt tttctttagg ttggtcagag cagatacaca tatgcttcat 960 aaatctgtgg ggcactattc gaaatcgaaa tctgagtact ttgcgctgaa tacccctccg 1020 atcttccaag acaaagccac gttttctgtg tggtttcctg aagcgaagcg taaggtgttg 1080 atacccaagt ttgaactttc aagattcctt tctgggaatg tgaaaatctc taggatgctt 1140 gtcgatgctg atttcgtcca taccattatt aatcacatta gcacgtatga taacaaggcc 1200 ttagtgtgga agaatgttca gtcctttgtg gaatccatac gctcaagagt aattgtaaac 1260 ggagtttcgg tgaaatctga atggaacgta ccggttgatc agctcactga tatctcgttc 1320 tcgatattcc ttctcgtgaa ggttaggaag gtacagatcg agttaatgtc tgataaagtt 1380 gtaatcgagg cgaggggctt gcttcggagg ttcgcagaca gtcttaaatc cgccgtagaa 1440 ggactaggtg actgcgtcta tgatgctcta gttcaaaccg gctggtttga cacctctagc 1500 gacgaactga aagtattgct gcctgaaccg tttatgactt tttcggatta tctcgaaggg 1560 atgtacgagg cggatgcaaa gatcgagaga gagagtgtct ctgagttgct cgcttccggt 1620 gacgatttgt tcaagaaaat cgatgagata agaaacaatt acagtggagt cgaatttgat 1680 gtagagaaat tccaggaatt ttgtaaggaa ctgaatgtta atcctatgct aattggccat 1740 gttatcgaag ctattttttc gcagaaagct ggggtaacag taacgggtct gggtactctc 1800 tctcctgaga tgggtgcttc tgttgcgtta tccaacacct ctgtagatac atgtgaagat 1860 atggatgtaa ctgaagatat ggaggatata gtgttgatgg cggacaagag tcattcttac 1920 atgtcccctg aaatggcgag atgggctgat gtaaaatacg gcaacaataa aggggccctg 1980 gtcgaataca aggtcggaac ctcgatgact ttacctgcca cctgggcaga gaagggtaag 2040 gctgtcttac cgttgtcggg gatctgtgtg aggaaacccc aattttcgaa gccgcttgat 2100 gaggaagacg acttgaggtt atcaaacatg aatttcttta aggtgagtga tctgaagttg 2160 aagaaaacta tcactccagt tgtttacact gggaccattc gagagaggca aatgaagaat 2220 tatattgatt acttatcggc ctctcttggt tctacgctgg gtaatctgga gagaattgtg 2280 cggagtgatt ggaacggttc tgaggagagt atgcaaacgt tcgggttgta tgactgcgaa 2340 aagtgcaagt ggttattgtt accggccgaa aagaagcacg catgggctgt ggttctggca 2400 agtgatgata ccactcgcat aatcttcctc tcatatgacg aatcaggttc tcccataatt 2460 gataggaaaa actggaggcg attcgctgtc tgctccgaga ccaaagtcta tagcgtaatt 2520 cgtagtttag aggtactaaa taaggaagca atagtcgacc caggggttca tataacatta 2580 gttgacggag tgccgggttg tgggaagacc gccgaaatta tagcgagggt caattggaaa 2640 actgatctag tattgactcc cgggagggag gcggctgcta tgattaggcg gagagcctgc 2700 gccctgcaca agtcacctgt ggcaaccagt gacaacgtta gaactttcga ttcttttgtg 2760 atgaatagaa aagtcttcaa gtttgacgct gtctatgttg acgagggtct gatggtccat 2820 acgggattac ttaattttgc gttaaagatc tcaggttgta aaagggcttt catctttggt 2880 gatgctaagc aaatcccgtt tataaacaga gttatgaatt ttgattatcc taaagagtta 2940 agaactttaa tagtcgataa tgtagagcgt aggtatgtca cccataggtg tcctagagat 3000 gtcactagtt ttcttaatac tatttacaaa gccgctgtcg ctactactag tccggttgta 3060 cattctgtga aggcaattaa agtgtcaggg gccggtattc tgaggcccga gttgacaaag 3120 atcaaaggaa agataataac gtttactcaa tctgataagc agtccttgat caaaagtggg 3180 tacaatgatg tgaacactgt gcatgaaatt cagggagaaa cctttgaaga gacggcggtt 3240 gtgcgtgcca ccccgactcc gataggttta attgcccgtg attcaccaca tgtactagtg 3300 gccttaacga ggcataccaa ggcaatggtg tattatactg ttgtgttcga tgcagttaca 3360 agtataatag cggatgtgga aaaggtcgat cagtcgatct tgaccatgtt tgctaccact 3420 gtgcctacca aatagcaatt aatgcagaac tcactgtatg tccatcgtaa tattttcctc 3480 cctgttagta aaacgggttt ttatacagac atgcaggagt tctatgatag atgccttcct 3540 gggaattcct tcgtgctgaa tgatttcgat gccgtaacca tgcggttgag ggacaacgaa 3600 tttaacctac aaccttgtag gctaacctta agtaatttag atccggtacc cgctttggtt 3660 aagagtgaag cgcagaattt tctgatcccc gttttgcgta cggcctgtga aaggccgcgc 3720 attccaggtc ttcttgaaaa tcttgtagct atgataaaga ggaacatgaa tactcctgat 3780 ctagctggga ccgtggatat aactaatatg tcgatttcta tagtagataa cttcttttct 3840 tcttttgtta gggacgaggt tttgcttgac cacttagatt gtgttagggc tagttccatt 3900 caaagttttt ctgattggtt ttcgtgtcag ccaacctcgg cggttggcca gttagctaat 3960 ttcaatttca tagatttgcc tgcctttgat acttatatgc atatgattaa gaggcagccc 4020 aagagtcggt tagatacttc gattcagtct gaatatccgg ccttgcaaac tattgtttat 4080 caccctaaag tggtaaatgc agttttcggt ccggttttta agtatttgac cactaagttt 4140 cttagcatgg tagatagttc taagtttttc ttttacacta ggaaaaaacc agaagatctg 4200 caggaatttt tctcagatct ctcttcccat tctgattatg agattcttga gcttgatgtt 4260 tctaaatatg acaagtcgca atccgatttc catttctcta ttgagatggc aatttgggaa 4320 aaattggggc tggacgatat attggcttgg atgtggtcta tgggtcataa gagaaccata 4380 ctgcaagatt tccaagccgg gataaagacg ctcatttact atcaacggaa gtctggtgat 4440 gtgactactt ttataggtaa cacctttatt atcgcagcgt gtgtagctag tatgttgccg 4500 ttagataagt gttttaaagc tagtttttgt ggtgatgatt cgctgatcta ccttcctaag 4560 ggcttggagt atcctgatat acaggctact gccaacctag tttggaattt tgaggcgaaa 4620 cttttccgaa ggaagtatgg ttacttctgt gggaagtata taattcacca tgccaacggc 4680 tgtattgttt accctgaccc tttaaaatta attagtaaat taggtaataa gagtcttgta 4740 gggtatgagc atgttgagga gtttcgtata tctctcctcg acgtcgctca tagtttgttt 4800 aatggtgctt atttccattt actcgacgat gcaatccacg aattgtttcc taatgctggg 4860 ggttgcagtt ttgtaattaa ttgtttgtgt aagtatttga gtgataagcg ccttttccgt 4920 agtctttata tagatgtctc taagtaaggt gtcggtcgag aactcattga aacctgagaa 4980 gtttgtcaaa atctcttggg tcgataagtt gctccctaac tatttttcca ttcttaagta 5040 tttgtctata accgacttta gtgtagttaa agctcagagc tatgaatccc tcgtgcctgt 5100 caagttgttg cgtggtgttg atcttacaaa acacctttat gtcacattgt tgggcgttgt 5160 ggtttctggt gtatggaacg taccggaatc ctgtaggggt ggtgctactg ttgctctggt 5220 tgacacaagg atgcattctg ttgcagaggg aactatatgc aaattttcag ctcccgccac 5280 cgtccgcgaa ttctctgtta ggttcatacc taattattct gtcgtggctg cggatgccct 5340 tcgcgatcct tggtctttat ttgtaagact ctctaatgta ggtatcaaag atggtttcca 5400 tcctttaacc ttagaggtcg cttgtttggt cgctacaact aactctatta tcaaaaaggg 5460 tcttagagct tctgtagtcg agtccgtcgt ctcttccgat cagtccattg tcctagattc 5520 tttatccgag aaagttgaac ctttctttga taaagttcct atttcggcgg ctgtaatggc 5580 aagagacccc agttataggt ctaggtcgca gtctgtcggt ggtcgtggta agcggcattc 5640 taaaccttca aatcggaggt tggactctgc ttctgaagag tccagttctg tttctttcga 5700 agatggctta caatccgatc acacctagca aacttattgc gtttagtgct tcttatgttc 5760 ccgtcaggac tttacttaat tttctagttg cttcacaagg taccgccttc cagactcaag 5820 cgggaagaga ttcttttcgc gagtccctgt ctgcgttacc ctcgtctgtc gtagatatta 5880 attctaggtt cccagatgcg ggtttttacg ctttcctcaa cggtcctgtg ttgaggccta 5940 tcttcgtttc gcttctcagc tccacggata cgcgtaatag ggtcattgag gttgtagatc 6000 ctagcaatcc tacgactgct gagtcactta acgctgtaaa gcgtactgat gatgcatcta 6060 cggccgctag ggctgaaata gataatttaa tagagtctat ttctaagggt tttgatgttt 6120 atgatagggc ttcatttgaa gccgcgtttt cggtagtctg gtcagaggct accacctcga 6180 aagcttagtt tcgagggtct tctgatggtg gtgcacacca aagtgcatag tgctttcccg 6240 ttcacttaaa tcgaacggtt tgctcattgg tttgcggaaa cctctcacgt gtgacgttga 6300 agtttctatg ggcagtaatt ctgca 6325 //