ID   GQ268322; SV 1; linear; genomic RNA; STD; VRL; 1222 BP.
XX
AC   GQ268322;
XX
DT   27-SEP-2010 (Rel. 106, Created)
DT   27-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Shallot virus X isolate Dindugal coat protein and nucleic acid binding
DE   protein genes, complete cds.
XX
KW   .
XX
OS   Shallot virus X
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Allexivirus.
XX
RN   [1]
RP   1-1222
RA   Majumder S., Baranwal V.K.;
RT   "Nucleotide sequence of coat protein and nucleic acid binding protein of
RT   Shallot virus X (ShVX) from India and its phylogeny reveals it to be a
RT   distinct isolate";
RL   Unpublished.
XX
RN   [2]
RP   1-1222
RA   Majumder S., Baranwal V.K.;
RT   ;
RL   Submitted (15-JUN-2009) to the INSDC.
RL   ACPV, Division of Plant Pathology, Indian Agricultural Research Institute,
RL   Pusa campus, New Delhi, Delhi 110012, India
XX
DR   MD5; 13c54b5182c0f660a0dcf4412716606f.
DR   EuropePMC; PMC3550721; 23637504.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1222
FT                   /organism="Shallot virus X"
FT                   /host="shallot"
FT                   /isolate="Dindugal"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:31770"
FT   CDS             3..791
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:E2CTI7"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:E2CTI7"
FT                   /protein_id="ACV88262.1"
FT                   /translation="MSEDDLNLSNASGDLNNPNNQRIPAGSSNINQPLPNVTASGQTQF
FT                   RPQGGLGNQNSRPVDTSNQNELLPTEAELESITSDVESNSVASKATVREILDALQAKRQ
FT                   NATPKDLFSLAWACYHNGSSKFVNLNTDAPCGITHAELKDLVEDYCTLRQFCSYYAKSC
FT                   YVAGKQQKKPPANWSRKGYPEEAKFAGFDFFNAVLSDSSPAPPGGMRFKPTQAEILGHS
FT                   LNAKMSIIESRQPSHMVSNRADLLGRQQINEQPKPPLITF"
FT   CDS             791..1162
FT                   /codon_start=1
FT                   /product="nucleic acid binding protein"
FT                   /db_xref="InterPro:IPR008891"
FT                   /db_xref="UniProtKB/TrEMBL:E2CTI8"
FT                   /protein_id="ACV88263.1"
FT                   /translation="MHPHDLNLLCCLHFAKPSLPNDLKLLLFRSCETSCKLNRRVFENK
FT                   PFQGTSKCAKRRRAKRYNRCFDCGAYLYDNHVCKRFTSLSSSDCLSVIHQGPVKLYAEG
FT                   AYRINSDAEQLILNDLLLN"
XX
SQ   Sequence 1222 BP; 352 A; 348 C; 246 G; 276 T; 0 other;
     tcatgagtga agatgattta aatctatcga atgcatcagg agatctcaac aaccccaaca        60
     atcagcgaat acctgccgga tcatccaata tcaaccagcc actcccaaat gtcacagcca       120
     gtggccagac ccaattcagg cctcaaggag gacttggaaa ccagaattct cgcccggtcg       180
     acacaagtaa ccagaatgaa ttgctgccca cagaagctga actcgaatcc atcaccagtg       240
     acgtggaatc caactctgta gcatccaaag ccacagttcg cgagatactg gacgccctac       300
     aagctaaaag gcagaacgcg accccgaaag atttgttctc acttgcctgg gcgtgttacc       360
     acaatggctc ttcaaaattc gtgaacctga acactgacgc cccttgcgga ataactcacg       420
     ccgaactcaa agacctcgtg gaagactact gcacgctgag acaattctgc agttattacg       480
     ctaaatcttg ttatgtagcg ggaaaacaac agaagaaacc ccccgctaac tggtcccgca       540
     aaggctaccc agaagaggcc aaatttgccg gcttcgattt cttcaacgcc gtgctcagcg       600
     actcatcccc agctccacct ggaggaatgc gattcaaacc cacccaggct gaaatccttg       660
     gccattccct gaatgcgaag atgtccataa ttgaatcccg ccagccgtca catatggtgt       720
     caaacagagc tgacctactg ggccgccaac aaatcaacga acaacccaag ccaccactga       780
     taacgttctg atgcatccac acgatctaaa tcttctttgc tgcctacact ttgctaaacc       840
     ctcattgcct aacgacctca aactccttct attccgttcc tgtgagacta gctgtaaatt       900
     aaaccgtaga gtatttgaga ataagccctt ccagggcact tctaagtgtg ctaaacgccg       960
     tagggcaaag cgttacaata gatgctttga ctgcggtgcc tacctgtacg ataatcatgt      1020
     gtgcaaacgt ttcaccagtc tttccagttc tgactgtttg agcgtcatcc atcaaggccc      1080
     tgttaagcta tacgctgaag gggcttatag aatcaactcc gacgctgaac agctcattct      1140
     gaacgactta ctattaaatt aaatctctta aatataggct tggcccaagc ctcccactgg      1200
     gtttacaggg gcatcgggac gt                                               1222
//