ID   GQ268231; SV 1; circular; genomic DNA; STD; VRL; 755 BP.
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AC   GQ268231;
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DT   19-NOV-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 1)
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DE   Sweet potato begomovirus strain SPBV-D-DNA-[9], complete genome.
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KW   .
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OS   Sweet potato begomovirus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
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RN   [1]
RP   1-755
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   "Detection, diversity analysis and cloning of Brazilian sweet potato
RT   geminiviruses using rolling circle amplification";
RL   Unpublished.
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RN   [2]
RP   1-755
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   ;
RL   Submitted (15-JUN-2009) to the INSDC.
RL   LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao
RL   Biologica, Brasilia, DF 70770-900, Brazil
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DR   MD5; 302bc33dd296e3d08b4c68aa0d521d9e.
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FH   Key             Location/Qualifiers
FH
FT   source          1..755
FT                   /organism="Sweet potato begomovirus"
FT                   /host="sweet potato"
FT                   /strain="SPBV-D-DNA-[9]"
FT                   /isolate="CNPH 598"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /clone="598/1-24"
FT                   /note="defective genome"
FT                   /db_xref="taxon:450633"
FT   gene            144..440
FT                   /gene="V2"
FT   misc_feature    144..440
FT                   /gene="V2"
FT                   /note="nonfunctional V2 due to mutation"
FT   gene            310..385
FT                   /gene="V1"
FT   misc_feature    310..385
FT                   /gene="V1"
FT                   /note="nonfunctional CP due to mutation; coat protein"
FT   gene            complement(479..601)
FT                   /gene="C1"
FT   misc_feature    complement(479..601)
FT                   /gene="C1"
FT                   /note="nonfunctional Rep due to mutation;
FT                   replication-associated protein"
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SQ   Sequence 755 BP; 195 A; 162 C; 181 G; 217 T; 0 other;
     accggtgccc gccgcgccct ttaaaagtgg gccccacatt ggtgctttaa tcatttatgc        60
     ccgcgcccgt tttttttttg tgggccccac attggtgctt taatcattta aagcgcgtca       120
     ttgacgcgcc tttgtctcca agtatggatt tgtgggatcc tttgcagaac cctctaccag       180
     agactttata cggtttacgg tgtataattt ctgtcaaata cttgcatagt attgctaaga       240
     aatacgagcc aggaacccta gggttcgagc tgtgctccga attaatccgc atcctgcggg       300
     ttcgtcatta tgacagggcg aatgcgcgtt acgcggagat ttcatccgta tggggggact       360
     ccggcaagac ggaggctgaa cttcggggcc ttctattact atacttatgg gactatctgg       420
     ccgcgcagcg gcatccatga cattctcagc agcccaatca ctgataatga caggaacatt       480
     attgaaagaa gaaatggatg tgtagcagtt gggctaggca gtcctcttta gagagagaac       540
     agcgtggata agtaatgaaa tatttttttg aagaaattct aaaacgtttg ggcggagcca       600
     tttggtgaca ctcagacttt caaatgaatt ggagactggt gacaatatat agtatgtctc       660
     caaatggcat tttggtaatt tagaagatcc ttttagcttt aattcaaaat ccgacaactc       720
     tgggtccacc ataaagcggg caccgtatta atatt                                  755
//