ID   GQ268230; SV 1; circular; genomic DNA; STD; VRL; 1323 BP.
XX
AC   GQ268230;
XX
DT   19-NOV-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 1)
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DE   Sweet potato begomovirus strain SPBV-D-DNA-[8], complete genome.
XX
KW   .
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OS   Sweet potato begomovirus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1323
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   "Detection, diversity analysis and cloning of Brazilian sweet potato
RT   geminiviruses using rolling circle amplification";
RL   Unpublished.
XX
RN   [2]
RP   1-1323
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   ;
RL   Submitted (14-JUN-2009) to the INSDC.
RL   LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao
RL   Biologica, Brasilia, DF 70770-900, Brazil
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DR   MD5; 729e939719e2b35f4ad9467066c042dd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1323
FT                   /organism="Sweet potato begomovirus"
FT                   /host="sweet potato"
FT                   /strain="SPBV-D-DNA-[8]"
FT                   /isolate="CNPH 1015"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /clone="1015/2-08"
FT                   /note="defective genome"
FT                   /db_xref="taxon:450633"
FT   gene            186..308
FT                   /gene="V2"
FT   misc_feature    186..308
FT                   /gene="V2"
FT                   /note="nonfunctional V2 due to mutation"
FT   gene            complement(286..1145)
FT                   /gene="C1"
FT   misc_feature    complement(286..1145)
FT                   /gene="C1"
FT                   /note="nonfunctional Rep due to mutation;
FT                   replication-associated protein"
FT   gene            complement(740..997)
FT                   /gene="C4"
FT   CDS             complement(740..997)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E5CYF3"
FT                   /protein_id="ACZ65975.1"
FT                   /translation="MGNLISMCYSSSKASSNARIRDSSTWYLQPGQHISIRTYRELNPA
FT                   PTSSPTSIRMEIRSSGESSRSTADLLEEASRQLMTLTHRP"
XX
SQ   Sequence 1323 BP; 341 A; 280 C; 311 G; 391 T; 0 other;
     accggtgccc gccgcgccct ttaaaagtgg gccccacaag ggaccacgcg cattccgtac        60
     ttgctttaat gatgactttg ctttataagg accaatcagg tttccaccct tggcgcccaa       120
     gtatggctga attgtgggac cctttgcaga acccactacc agatacttta tacggtttta       180
     ggtgtatgct atctgtaaaa tacctgcagg gtattctgaa gaaatacgag ccaggaaccc       240
     tagggttcga gctctgttcg gagttaatcc gcatcttcag ggtcaggctt tccgtattta       300
     cagtttgatt gccagtcctt ctgggccccc atgaattcct taaagtgctt taagtattgg       360
     gggttgacgt catcaatgac gttataccaa gcactgttgc tgtacacttt agggcttaga       420
     tctaaatgcc cacacaaata attgtgaggg cccaaagacc tggcccatac tgttttgcct       480
     attctgcttg ggccttcaat aacaatggat atgggtctat ccggccgcgc agcggaatcc       540
     atgacatttt cagcggccca gtcgctgata atgtcaggaa cggcgttgaa agaagaagaa       600
     gaaaaaggag aagaatatac agaaggagga ggagaaaaaa tcctatctaa attcgaatta       660
     atattatgga attgtagaac aaaatccttt ggacacaatt ccttaattac gtttaaggca       720
     gcttctttgc tgcctgtgtt taaggcctgt gcgtaagcgt cattagctgt ctgctggcct       780
     cctctagcag atctgccgtc gatctggaac tctccccact cgatcgtatc tccatcctta       840
     tcgacgtagg acttgacgtc ggagctggat ttagctccct gtatgttcgg atggaaatgt       900
     gctgacctgg ttggagatac caggtcgaag aatctctgat tcttgcattg gaacttgcct       960
     tcgaactgga gtagcacatg gagatgaggt tccccatcct cgtgcagttc tctgcaaatt      1020
     ttaataaatt ttttgttaac tggagtgtta aggttttgta attgggttag tgcctcttcc      1080
     ttagatagag agcactttgg ataagtgagg aagtagttct tcgcatttat cttaaatgag      1140
     cggggtaatg tcggcatttt tgaaaaatga attggggtct ctcaaagctc tatgggtatc      1200
     ggtgtattgg ggtcttattt atagtcagac tccaaatggc attttggtaa atagaattct      1260
     aatttgaaat tcaaattccg acaactattg gtccacccaa aaggcgggca ccgtattaat      1320
     att                                                                    1323
//