ID   GQ268229; SV 1; circular; genomic DNA; STD; VRL; 1335 BP.
XX
AC   GQ268229;
XX
DT   19-NOV-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Sweet potato begomovirus strain SPBV-D-DNA-[7], complete genome.
XX
KW   .
XX
OS   Sweet potato begomovirus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1335
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   "Detection, diversity analysis and cloning of Brazilian sweet potato
RT   geminiviruses using rolling circle amplification";
RL   Unpublished.
XX
RN   [2]
RP   1-1335
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   ;
RL   Submitted (13-JUN-2009) to the INSDC.
RL   LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao
RL   Biologica, Brasilia, DF 70770-900, Brazil
XX
DR   MD5; 25fdaf2ac3e3743e060db0d949bf99f8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1335
FT                   /organism="Sweet potato begomovirus"
FT                   /host="sweet potato"
FT                   /strain="SPBV-D-DNA-[7]"
FT                   /isolate="CNPH 1168"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /clone="1168/3-11"
FT                   /note="defective genome"
FT                   /db_xref="taxon:450633"
FT   gene            90..386
FT                   /gene="V2"
FT   misc_feature    90..386
FT                   /gene="V2"
FT                   /note="nonfunctional V2 due to mutation"
FT   gene            256..390
FT                   /gene="V1"
FT   misc_feature    256..390
FT                   /gene="V1"
FT                   /note="nonfunctional CP due to mutation; coat protein"
FT   gene            complement(385..1173)
FT                   /gene="C1"
FT   misc_feature    complement(385..1173)
FT                   /gene="C1"
FT                   /note="nonfunctional Rep due to mutation;
FT                   replication-associated protein"
FT   gene            complement(759..1022)
FT                   /gene="C4"
FT   CDS             complement(759..1022)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E5CYF2"
FT                   /protein_id="ACZ65974.1"
FT                   /translation="MKMGNLISMCFSSSRGITSARIKDSSTWSLQPGQHISTQTFRERN
FT                   PAPTSSPTSIRMETLWNGENSRSTADLLEEASRLLMTQQQRP"
XX
SQ   Sequence 1335 BP; 351 A; 279 C; 316 G; 389 T; 0 other;
     accggtgccc gcgtttgttt tatggtgggc cccacacggc acctttaatc attaaaaggc        60
     gcgtcaatta cgagactttg tcgccaagta tggatttgtg ggatcctttg cagaacccat       120
     tacctgagac tttatacggt ctacggtgta tgctttctgt gaaatacctg cagagtattt       180
     cggcgaaata cgagcctgga accctagggt tcgagctttg ctccgattta atccgcattt       240
     tgcgggttcg tcactatgac agggcgaatg cgcgttacgc ggagatttca tccgtatggg       300
     gggacaccgg caagacggag actgaacttc gagaccgcta tcgtgcctta cactgggaat       360
     gctgtcccaa ttgctgcccg aagtgacgtc atcaatgacg ttataccaag cactgttgct       420
     atacactttg ggactcaagt ccaggtgtcc acacaaataa ttatgaggac ctaacgaccg       480
     agcccatact gtttttccta ttctacttgg gccttctata acaatactaa tgggcctatc       540
     cggccgcgca gcggaatcca tgacattctc agcagcccag tcgctgataa tgtcaggtac       600
     attattgaaa gaagaagaag aaaaagggga agaatacaca gaaggaggag gagaaaaaat       660
     cctatctaaa tttgaaacta aattatgata ttgaaatata tatttttcag gaagtttttc       720
     cctgattatt tgtaacgcag cttctttata gcctgcattt agggcctctg ctgctgcgtc       780
     attagcagtc tgctggcctc ctctagcaga tctgccgtcg acctggaatt ctccccattc       840
     caaagtgtct ccatccttat cgacgtagga cttgacgtcg gagctggatt tcgctctctg       900
     aatgtttggg tggaaatgtg ctgaccgggt tggagagacc aagtcgaaga atctttgatt       960
     cgtgcactgg taattcccct cgaactggag aagcacatgg agatgaggtt gcccatcttc      1020
     atgcagttct ctgcatatct taatatattt tttatttgta ggggtttgta gttgaagaag      1080
     ctgctgaaga gtttcttctt tggatagaga acattgggga taagtgagaa aatagttttt      1140
     tgctttgata ttaaaacgcc cggctcttgg cattttgact aagtcaaatg gtggacacaa      1200
     aaactctata tgaattggtg gaacggtgga caatttatat gtgtccacca aatggcaaat      1260
     tggtaattta ggtaacttta atttgaatgg taagatccta ttggtcctcc ataaagcggg      1320
     caccgtatta atatt                                                       1335
//