ID   GQ268228; SV 1; circular; genomic DNA; STD; VRL; 1352 BP.
XX
AC   GQ268228;
XX
DT   19-NOV-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Sweet potato begomovirus strain SPBV-D-DNA-[6], complete genome.
XX
KW   .
XX
OS   Sweet potato begomovirus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1352
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   "Detection, diversity analysis and cloning of Brazilian sweet potato
RT   geminiviruses using rolling circle amplification";
RL   Unpublished.
XX
RN   [2]
RP   1-1352
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   ;
RL   Submitted (13-JUN-2009) to the INSDC.
RL   LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao
RL   Biologica, Brasilia, DF 70770-900, Brazil
XX
DR   MD5; 4a1ccd6ea9c78a66b2da6ae8c1cfce2e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1352
FT                   /organism="Sweet potato begomovirus"
FT                   /host="sweet potato"
FT                   /strain="SPBV-D-DNA-[6]"
FT                   /isolate="CNPH 1090"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /clone="1090/2-06"
FT                   /note="defective genome"
FT                   /db_xref="taxon:450633"
FT   gene            complement(121..217)
FT                   /gene="C2"
FT   misc_feature    complement(121..217)
FT                   /gene="C2"
FT                   /note="nonfunctional TrAp due to mutation; trans-activating
FT                   protein"
FT   gene            complement(126..1124)
FT                   /gene="C1"
FT   misc_feature    complement(126..1124)
FT                   /gene="C1"
FT                   /note="nonfunctional Rep due to mutation;
FT                   replication-associated protein"
FT   gene            complement(806..1063)
FT                   /gene="C4"
FT   CDS             complement(806..1063)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E5CYF1"
FT                   /protein_id="ACZ65973.1"
FT                   /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA
FT                   PTSSPTSIRMETHWNGANSRSTADLLEEASRLLTTQQQKH"
XX
SQ   Sequence 1352 BP; 332 A; 291 C; 313 G; 416 T; 0 other;
     accggtgccc gccgcgccct tttaaagtgg gccccacaat gggaccacgc gtctttgccg        60
     tactgtcttt aatgattact ttgctttata aggaccaatc aggtttccgt gcttgggcgc       120
     caggttcagg agtcttcctc tggctcttct tggccgccgc gtgtattggt tcctgagtgg       180
     gacacttcct cttgtatcca gaaggggctg tcgacatcac agaaaactgc gtttttcaca       240
     gcccagttct tgagtgcttc ttgttctggc ttgtccagcc agagtttaaa tgaagagcct       300
     tctcctggat tgcagaggaa gatagtgggt attccacctt taatttgaac tggctttccg       360
     tatttacaat tgctttgcca gtctttctgg gcccccatga actctttaaa gtgctttaag       420
     tattgggggt tgacgtcatc aatgacgtta taccaagcac tgttgctata cacctttgga       480
     ctcaggtcca aatgcccaca cagataatta tgttggccta aggatctagc ccaaactgtt       540
     ttacctattc tacttgggcc ttctatgact atacttatgg gcctatctgg ccgcgcagcg       600
     gcatccatga cattctcagc agcccaatca ctgataatgt caggaacatt attgaaagaa       660
     gaaatggaaa aaggtgaaga ataaacagaa ggaggaggag aaaaaatcct atctaaattg       720
     ctaactaaat tatgatattg aaatataaat ttttcaggga gtttctccct gattatttgt       780
     aaagcagcgt ccttacttcc tgcatttaat gcttctgctg ctgcgtcgtt agcagtctgc       840
     tggcctcctc tagcagatct gccgtcgacc tggaattcgc cccattccaa tgtgtctcca       900
     tccttatcga cgtaggactt gacgtcggag ctggatttag ctctttgaat gttaggatgg       960
     aaatgtgctg acctggtttg agagaccagg tcgaataggc gttggttcgt gcactggaat      1020
     ttgccttcga attgcagaag cacatggaga tgaggttgcc catcttcgtg tagttccctg      1080
     cagttgggat attttggatt tgggctaatg cttcttcttt ggagatagag cattggggat      1140
     atgtaagaaa ataatttttg gcatttatat tgaacctccc ggctctcggc attttaaaaa      1200
     gcaatgggtg gacacacaaa ctctatatga attggtggaa gggtggacaa tttatatgtg      1260
     tccacctaat ggcattttgg taattagaac aactttaatt tgaattcaga aatcctattg      1320
     gtccgccata aagcgggcac cgtattaata tt                                    1352
//