ID   GQ268225; SV 1; circular; genomic DNA; STD; VRL; 1383 BP.
XX
AC   GQ268225;
XX
DT   19-NOV-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Sweet potato begomovirus strain SPBV-D-DNA-[3], complete genome.
XX
KW   .
XX
OS   Sweet potato begomovirus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1383
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   "Detection, diversity analysis and cloning of Brazilian sweet potato
RT   geminiviruses using rolling circle amplification";
RL   Unpublished.
XX
RN   [2]
RP   1-1383
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   ;
RL   Submitted (11-JUN-2009) to the INSDC.
RL   LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao
RL   Biologica, Brasilia, DF 70770-900, Brazil
XX
DR   MD5; 56a33018f5d03e2355c6a366caf3d5bd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1383
FT                   /organism="Sweet potato begomovirus"
FT                   /host="sweet potato"
FT                   /strain="SPBV-D-DNA-[3]"
FT                   /isolate="CNPH 1067"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /clone="1067/1-09"
FT                   /note="defective genome"
FT                   /db_xref="taxon:450633"
FT   gene            72..428
FT                   /gene="V2"
FT   misc_feature    72..428
FT                   /gene="V2"
FT                   /note="nonfunctional V2 due to mutation"
FT   gene            295..412
FT                   /gene="V1"
FT   misc_feature    295..412
FT                   /gene="V1"
FT                   /note="nonfunctional CP due to mutation; coat protein"
FT   gene            complement(387..1229)
FT                   /gene="C1"
FT   misc_feature    complement(387..1229)
FT                   /gene="C1"
FT                   /note="nonfunctional Rep due to mutation;
FT                   replication-associated protein"
FT   gene            complement(815..1072)
FT                   /gene="C4"
FT   CDS             complement(815..1072)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E5CYE8"
FT                   /protein_id="ACZ65970.1"
FT                   /translation="MGNLTSMCWCSSKANSSAQIADSSIWYHRTDRITFTPTSRELNPR
FT                   PMSSPTLTRTGIPSPGVNSRSTADLLEEASRLLMTQPQRL"
XX
SQ   Sequence 1383 BP; 367 A; 289 C; 332 G; 395 T; 0 other;
     accggtgccc gccgcgccct ttaaaagtgg gccccacaaa tggaccacgc gtcttttccg        60
     tactgtcttt aatgattact ttgctttata aggaccaatc aggtttccgt gcttgggcgc       120
     caagaatgga gcagttgtgg gaccctttgc agaacccact cccggatact ttatacggtt       180
     ttaggtgtat gctatccgta aaatacttgc agagtatttt gaagaaatac gagccaggaa       240
     ccttagggtt cgagctctgt tctgagttaa tccgtatatt cagggtcagg cagtatgaca       300
     gggcgaatgc gcgttacgca gagatttcat ccgtttgggg ggagaccggt aagacggagg       360
     ctgaacttcg agacagctat cgtgccctac actgggaatg ctgtcccaat ttctttaaag       420
     tgctttaggt attgggggtt gacgtcatca atgacgttat accaaacact gttgctatac       480
     acctttggac tcaggtccaa atgcccacac agataattat gtgggcctaa ggatctagcc       540
     caaactgttt tacctattct acttgggcct tctataacta tacttatggg cctatctggc       600
     cgcgcagcgg catccatgac attatcagca gcccaatcgc tgataatggc aggaacatta       660
     ttgaaagaag aaatcgaaaa aggggaagaa tatacagaag gaggaggaga aaaaatccta       720
     tctaaattac taactaaatt atgaaattga aataaatatt tttcagggag tttctcccta       780
     attatttgca acgcagcttc tttagaactt gcgtttagag cctctgcggc tgcgtcatta       840
     gcagtctgct ggcctcctct agcagatctg ccgtcgacct ggaattcacc ccaggtgatg       900
     gtatccccgt ccttgtcaac gtaggacttg acatcggacg aggatttagc tccctggatg       960
     ttggggtgaa agtgattcga tctgttcggt gataccagat cgaagaatct gctatttgtg      1020
     cagacgaatt tgccttcgaa ctgcaccagc acatggaggt gaggttcccc atcctcgtgc      1080
     agttctctag ctacgtgtat gtattttttg ttggtgggtg tttggatatt taggagttgg      1140
     gctaggcagt cctcttttga gagagaacaa cgtggataag taataaaata atttttggcc      1200
     tgaattttaa aacgttttgg aggagccatt tggagacacg cataagttca aatgaattgg      1260
     agactggaga caatatatag tatgtctcca aatggcattc tggtaattta gaagatcctt      1320
     ttagctttaa ttcaaattcc gacaactctg ggtccaccaa aaggcgggca ccgtattaat      1380
     att                                                                    1383
//