ID   GQ268224; SV 1; circular; genomic DNA; STD; VRL; 1390 BP.
XX
AC   GQ268224;
XX
DT   19-NOV-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Sweet potato begomovirus strain SPBV-D-DNA-[2], complete genome.
XX
KW   .
XX
OS   Sweet potato begomovirus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1390
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   "Detection, diversity analysis and cloning of Brazilian sweet potato
RT   geminiviruses using rolling circle amplification";
RL   Unpublished.
XX
RN   [2]
RP   1-1390
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   ;
RL   Submitted (11-JUN-2009) to the INSDC.
RL   LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao
RL   Biologica, Brasilia, DF 70770-900, Brazil
XX
DR   MD5; 27d64d45875061c8880cc3952e71083a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1390
FT                   /organism="Sweet potato begomovirus"
FT                   /host="sweet potato"
FT                   /strain="SPBV-D-DNA-[2]"
FT                   /isolate="CNPH 981"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /clone="981/2-24"
FT                   /note="defective genome"
FT                   /db_xref="taxon:450633"
FT   gene            complement(141..255)
FT                   /gene="C2"
FT   misc_feature    complement(141..255)
FT                   /gene="C2"
FT                   /note="nonfunctional TrAp due to mutation; trans-activating
FT                   protein"
FT   gene            complement(164..1162)
FT                   /gene="C1"
FT   misc_feature    complement(164..1162)
FT                   /gene="C1"
FT                   /note="nonfunctional Rep due to mutation;
FT                   replication-associated protein"
FT   gene            complement(844..1101)
FT                   /gene="C4"
FT   CDS             complement(844..1101)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E5CYE7"
FT                   /protein_id="ACZ65969.1"
FT                   /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA
FT                   PTSSPTSIRMETHRNGANSRSTADLLEEASRLLTTQQQKH"
XX
SQ   Sequence 1390 BP; 344 A; 306 C; 319 G; 421 T; 0 other;
     accggtgccc gccgcgccct ttaaaagtgg accccaccaa ttgacaacgc gtcctctccg        60
     tactctttca atgatgacat tgctttataa ggaccaatcc tgttccagtc tcggtcgcca       120
     agtatggctg aattgtggga cccacactat cctcgtcctt gtttcaggaa ctttcctctt       180
     ggccttcttc gctgctgcgt gtaatggctc ctgctccgga cacttcctct tgtacccaga       240
     aaggggattg gacatcgcag aatatagcgt ttgctgttgc ccaattcttg agtgctcctt       300
     gctctggctt gtctagccag agtttaaatg aggaaccctc tcctggattg cagaggaaga       360
     tagtgggaat tccgccttta atttgaactg gctttccgta tttacagttg gattgccagt       420
     ccttctgggc ccccatgaac tctttaaagt gctttaggta ttgggggttg acgtcatcaa       480
     tgacgttata ccaagcactg ttgctgtaca cctttggact caggtccaaa tgcccacaca       540
     gataattatg tgggcctaat gatctagccc aaactgtttt acctattcta cttgggcctt       600
     ctataacaat acttatgggc ctatttggcc gcgcagcggc atccatgaca ttctcagcag       660
     cccaatcact gataatgtca ggaacattat tgaaagaaga aatggaaaaa ggtgaagaat       720
     aaacagaagg aggaggagaa aaaatcctat ctaaattgct aagtaaatta tgatattgaa       780
     atataaattt ttcagggagt ttctccctga ttatttgtaa agcagcgtcc ttatttcctg       840
     catttaatgc ttctgctgct gcgtcgttag cagtctgctg gcctcctcta gcagatctgc       900
     cgtcgacctg gaattcgccc cattccgatg tgtctccatc cttatcgacg taggacttga       960
     cgtcggagct ggatttagct ctttgaatgt taggatggaa atgtgctgac ctggtttgag      1020
     agaccaggtc gaataggcgt tggttcgtgc actggaattt gccttcgaat tgcagaagca      1080
     catggagatg aggttgccca tcttcgtgta gttccctgca gttgggatat tttggatttg      1140
     ggctaatgct tcttcgttgg agatagagca ttggggatat gtaagaaaaa aatttttggc      1200
     atttatattg aacctcccgg ctctcggcat tttaaaaagc aatgggtgga cacacaaact      1260
     ctatatgaat tggtggaagg gtggacaatt tatatgtgtc cacctaatgg cattttggta      1320
     attagaacaa ctttaatttg aattcagaat tcctattggt ccgccataaa gcgggcaccg      1380
     tattaatatt                                                             1390
//