ID   GQ268223; SV 1; circular; genomic DNA; STD; VRL; 1356 BP.
XX
AC   GQ268223;
XX
DT   19-NOV-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Sweet potato begomovirus strain SPBV-D-DNA-[1], complete genome.
XX
KW   .
XX
OS   Sweet potato begomovirus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1356
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   "Detection, diversity analysis and cloning of Brazilian sweet potato
RT   geminiviruses using rolling circle amplification";
RL   Unpublished.
XX
RN   [2]
RP   1-1356
RA   Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H.,
RA   Faria J.C., Ribeiro S.G.;
RT   ;
RL   Submitted (11-JUN-2009) to the INSDC.
RL   LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao
RL   Biologica, Brasilia, DF 70770-900, Brazil
XX
DR   MD5; 7ff95853ea70af786999443170e812c5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1356
FT                   /organism="Sweet potato begomovirus"
FT                   /host="sweet potato"
FT                   /strain="SPBV-D-DNA-[1]"
FT                   /isolate="CNPH 1085"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /clone="1085/3-06"
FT                   /note="defective genome"
FT                   /db_xref="taxon:450633"
FT   gene            120..398
FT                   /gene="V1"
FT   misc_feature    120..398
FT                   /gene="V1"
FT                   /note="nonfunctional CP due to mutation; coat protein"
FT   gene            complement(351..1202)
FT                   /gene="C1"
FT   misc_feature    complement(351..1202)
FT                   /gene="C1"
FT                   /note="nonfunctional Rep due to mutation;
FT                   replication-associated protein"
FT   gene            complement(788..1045)
FT                   /gene="C4"
FT   CDS             complement(788..1045)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E5CYE6"
FT                   /protein_id="ACZ65968.1"
FT                   /translation="MGNLTSMCWCSSKANSSAQIADSSIWSHRTDRITFTPTSRELNPR
FT                   PMSSPTLTRTGIPSPGVNSRSTADLLEEASRLLMTQPQRL"
XX
SQ   Sequence 1356 BP; 354 A; 286 C; 333 G; 383 T; 0 other;
     accggtgccc gccgcgccct tttaaagtgg gccccacaat gggaccacgc gtcttttccg        60
     tactgtcttt aatgattact ttgctttata aggaccaatc aggtttccgt gcttgggcgg       120
     gaacgtttgt ctgtgtctcg gattttacta ggggaactgg gcttacccat cgcctgggta       180
     agcgtgtttg tgtgaagtcc atgggtatag atggtaaggt ctggatggat gacaatgtgg       240
     ccaagagaga tcacaccaat atcatcacgt attggctgat tcgtgacagg aggcccaata       300
     aggatccgct taactttggc cagatcttca cgacgtacga caatgagccc actactgcta       360
     agatccgaat gggcccccat gaattcctta aagtgcttta ggtattgggg gttgacgtca       420
     tcaatgacgt tataccaagc actgttgctg tatactttag ggcttagatc taaatgccca       480
     cacaaataat tatgaggccc caaagacctg gcccatactg ttttgcctat tctgcttggg       540
     ccttcaataa caatggatat gggtctatcc ggccgcgcag cggaatccat gacattttca       600
     gcggcccagt cgctgataat gtcaggaacg gcattgaaag aagaagatga aaaaggagaa       660
     gaatatacag aaggaggagg agaaaaaatc ctatctaaat tactaactaa attgtgaaat       720
     tgaaacaaat atttttcagg aagtttctcc ctaattattt gcaacgcagc ttctttagaa       780
     cctgcgttta gagcctctgc ggctgcgtca ttagcagtct gctggcctcc tctagcagat       840
     ctgccgtcga cctggaattc accccaggtg atggtatccc cgtccttgtc aacgtaggac       900
     ttgacatcgg acgaggattt agctccctgg atgttggggt gaaagtgatt cgatctgttc       960
     ggtgagacca gatcgaagaa tctgctattt gtgcagacga atttgccttc gaactgcacc      1020
     agcacatgga ggtgaggttc cccatcctcg tgcagttctc ttgctacgtg tatgtatttt      1080
     ttgttggtgg gtgtttcgat atttaggagt tgggctaggc agtcctcttt tgagagagaa      1140
     cagcgtggat aagtaataaa ataatttttg gcctgaattt taaaacgttt tggaggagcc      1200
     atttggagac acgcataagt tcaaatgaat tggagactgg agacaatata tagtatgtct      1260
     ccaaatggca ttctggtaat ttagaagatc cttttagctt taattcaaat tccgacaact      1320
     ctgggtccac caaaaggcgg gcaccgtatt aatatt                                1356
//