ID   GQ258985; SV 1; linear; genomic RNA; STD; VRL; 1203 BP.
XX
AC   GQ258985;
XX
DT   19-MAY-2010 (Rel. 104, Created)
DT   20-MAY-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Broome virus segment S3, complete sequence.
XX
KW   .
XX
OS   Broome virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
XX
RN   [1]
RP   1-1203
RX   DOI; 10.1016/j.virol.2009.11.048.
RX   PUBMED; 20350736.
RA   Thalmann C.M., Cummins D.M., Yu M., Lunt R., Pritchard L.I., Hansson E.,
RA   Crameri S., Hyatt A., Wang L.F.;
RT   "Broome virus, a new fusogenic Orthoreovirus species isolated from an
RT   Australian fruit bat";
RL   Virology 402(1):26-40(2010).
XX
RN   [2]
RP   1-1203
RA   Thalmann C.M., Wang L.-F.;
RT   ;
RL   Submitted (10-JUN-2009) to the INSDC.
RL   Commonwealth Scientific and Industrial Research Organisation (CSIRO),
RL   Livestock Industries Australian Animal Health Laboratory, Private Bag 24,
RL   Geelong, Victoria 3220, Australia
XX
DR   MD5; 8e8673a92dc9e2f14589a3b03f036ff5.
XX
CC   GenBank Accession Numbers GQ258977-GQ258986 represent the complete
CC   genome of Broome virus from Pteropus scapulatus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1203
FT                   /organism="Broome virus"
FT                   /segment="S3"
FT                   /host="Pteropus scapulatus (little red flying fox)"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:667093"
FT   CDS             20..1126
FT                   /codon_start=1
FT                   /product="sigma-class non-structural protein"
FT                   /note="sigma NS"
FT                   /db_xref="GOA:D6MM28"
FT                   /db_xref="InterPro:IPR002507"
FT                   /db_xref="UniProtKB/TrEMBL:D6MM28"
FT                   /protein_id="ACU68608.1"
FT                   /translation="MATLRLPVARANQVNRSENVFTNLYLLKGAVSAEGQRVLKAANVY
FT                   FGGLRGAMRYLNPMNATAKERILMPVNVAKLRQRNQLSLFDRALIMMHVDGQTMCCGRH
FT                   GLSNLREVLSDVTNDNDEYILKILPTDVAYYHPVAVVRALALSSCGMLLSEDAMGYKDT
FT                   PIFHGMADLLIFKMALPYLLSEAGGEVHVKAPDVTVEMMLTDLDLLGAMDLSYGTEVSS
FT                   DQRFTSDQAHDGSRSINEFEDGRSTERQVIKLICCLLAYQLKLELDALKDMSADLKDTV
FT                   HLTSFGAQLLKQASFFAPIDVELCKLMLEINDSNRAMSPATISAKWGEIRSSSDHDLTG
FT                   FCVTMRGGNWVMSFLERVRLTVRPAKIA"
XX
SQ   Sequence 1203 BP; 308 A; 181 C; 352 G; 362 T; 0 other;
     gtcaaaaatt tgtggcacga tggctactct caggcttcct gttgcgcgtg ctaatcaggt        60
     gaataggagt gaaaatgtgt ttacaaattt atatttattg aagggggctg ttagtgcgga       120
     ggggcagcga gtcttaaagg cggctaatgt gtattttggt ggcttacggg gtgctatgcg       180
     ctatttgaat ccaatgaatg ccactgctaa ggaacgaatc ttgatgccgg ttaatgtggc       240
     gaaattgcgt cagcgtaacc aattgagctt atttgacaga gctttgataa tgatgcatgt       300
     ggatggtcaa actatgtgtt gtggtcggca tggattaagt aacttgagag aggttctaag       360
     tgacgtaacg aatgacaatg atgaatacat cttgaagatt ttgcctacgg atgttgcata       420
     ttatcacccg gttgcggtgg tgcgtgcttt ggcgttgtca agctgcggta tgcttttgtc       480
     tgaggatgcc atggggtata aggatacacc aattttccat ggtatggctg acttattgat       540
     atttaaaatg gcattgccct atttgttgtc tgaggctggg ggagaggttc acgtgaaagc       600
     acctgatgtg actgtggaga tgatgttgac agatctcgac ttattggggg ccatggattt       660
     gagttatggt acagaagtga gtagtgatca gagatttaca agtgatcaag cacatgatgg       720
     gtctaggtca attaatgagt ttgaagatgg tagatcaact gaacgtcagg tgattaagtt       780
     gatatgttgt ctattggcgt atcaattgaa gcttgagttg gatgcattga aagatatgag       840
     tgctgatttg aaggatacag tacatttgac gtcatttgga gcacagttac ttaagcaagc       900
     gagtttcttt gcccctattg atgtggaact gtgtaagcta atgttggaga ttaacgatag       960
     taatcgggcg atgagtccag cgacgatatc ggcgaaatgg ggagagatac gttcgtcatc      1020
     agatcatgac ttgactggtt tttgtgtgac catgagggga ggaaattggg taatgagctt      1080
     tcttgagcgg gtgaggttga ctgtacgacc tgctaagatt gcctgaatgg ggagcgcaag      1140
     gagatgcgag tggcctctgt tgtggtcgct gcacaggcca taacatactg tcatatattc      1200
     atc                                                                    1203
//