ID   GQ258984; SV 1; linear; genomic RNA; STD; VRL; 1231 BP.
XX
AC   GQ258984;
XX
DT   19-MAY-2010 (Rel. 104, Created)
DT   20-MAY-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Broome virus segment S2, complete sequence.
XX
KW   .
XX
OS   Broome virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
XX
RN   [1]
RP   1-1231
RX   DOI; 10.1016/j.virol.2009.11.048.
RX   PUBMED; 20350736.
RA   Thalmann C.M., Cummins D.M., Yu M., Lunt R., Pritchard L.I., Hansson E.,
RA   Crameri S., Hyatt A., Wang L.F.;
RT   "Broome virus, a new fusogenic Orthoreovirus species isolated from an
RT   Australian fruit bat";
RL   Virology 402(1):26-40(2010).
XX
RN   [2]
RP   1-1231
RA   Thalmann C.M., Wang L.-F.;
RT   ;
RL   Submitted (10-JUN-2009) to the INSDC.
RL   Commonwealth Scientific and Industrial Research Organisation (CSIRO),
RL   Livestock Industries Australian Animal Health Laboratory, Private Bag 24,
RL   Geelong, Victoria 3220, Australia
XX
DR   MD5; 5e2f399e811debae98523c6928865d2a.
XX
CC   GenBank Accession Numbers GQ258977-GQ258986 represent the complete
CC   genome of Broome virus from Pteropus scapulatus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1231
FT                   /organism="Broome virus"
FT                   /segment="S2"
FT                   /host="Pteropus scapulatus (little red flying fox)"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:667093"
FT   CDS             28..1191
FT                   /codon_start=1
FT                   /product="major outer capsid protein"
FT                   /note="sigma B"
FT                   /db_xref="GOA:D6MM27"
FT                   /db_xref="InterPro:IPR000153"
FT                   /db_xref="InterPro:IPR023634"
FT                   /db_xref="UniProtKB/TrEMBL:D6MM27"
FT                   /protein_id="ACU68607.1"
FT                   /translation="MEVRPLHLHCVAEGIYQSYDDLIPNYSTIEGWAGIGQYVPPEVIR
FT                   VGRAYVCTQCGGMLYYDRPDERDYYFPHHVCHQRYDRFNSPFQLLVRTARVTALLKRRT
FT                   AVMLREGMNAVLNANGQSGKDILTDDVSTNTKVTLTGDSGKTGEVEWSDVNISGALIGG
FT                   METDPDFWQRPIDELMSNGHVIQPAARIRHLFEVFGDVMKKKEVFYTLGVPCNYSSANV
FT                   DHFLGSSAYDLAESKFSVNINMQPRSYLLPVDDSKVLQWPFGTKDASKAFSARPINIAP
FT                   LVGNVSLLLNTTDSARGELTIRMDTSRKMRYFREFLTRIYDGWHRNHLAVVVPNGIACA
FT                   QSLMEREIYHYLKSPGDIACERQVSHKLFITGLSGVKKIAAYQFKDA"
XX
SQ   Sequence 1231 BP; 351 A; 199 C; 310 G; 371 T; 0 other;
     gtcaaaacta cttcacctat tgtaggcatg gaggttcgtc cgttacattt acattgtgtg        60
     gcagagggta tctatcagag ttacgatgat ttgattccga attattctac aattgagggt       120
     tgggctggca taggacaata tgtgccaccc gaagtaatcc gtgtgggtcg tgcttatgta       180
     tgtacacaat gtggtggtat gctttattat gataggccgg atgagaggga ttattatttt       240
     ccacatcatg tgtgccatca acgctatgat cgctttaatt ctccatttca gttgttggta       300
     cgaactgcga gagtcacggc gctattgaaa agaagaactg ctgttatgct tcgtgaaggg       360
     atgaatgctg tattaaacgc taatggacag agtggtaagg atattcttac tgatgatgtc       420
     agcactaata cgaaagtgac actaactggt gatagcggaa agactggtga agtggaatgg       480
     tccgatgtca atatcagtgg agcgttgatt ggtggaatgg aaacggatcc tgatttttgg       540
     cagagaccga ttgatgaact catgtcaaat ggtcatgtga ttcaacctgc agcacggatt       600
     cgtcatttat ttgaagtatt tggtgatgta atgaagaaga aggaagtgtt ttacacgctg       660
     ggtgtacctt gtaattattc atcagcgaat gtagatcact ttctcggttc aagtgcatat       720
     gatttggctg aatcaaaatt tagcgttaat ataaacatgc agccacgctc atatttattg       780
     cctgtggatg atagtaaggt attacagtgg ccttttggaa caaaggacgc ttccaaagcg       840
     ttttcagctc gtcctataaa tatagcacca ttggttggca atgtttcatt gctattgaat       900
     acgacggatt cggcaagggg tgaattaaca atacggatgg atacatcaag gaagatgcgt       960
     tattttagag agtttttaac tagaatatat gatggatggc atcggaatca cttagcagta      1020
     gtagtaccga atggcatagc atgcgctcag agtttgatgg aacgtgaaat atatcattac      1080
     ttgaagagtc ctggagatat agcttgtgaa aggcaagtgt ctcacaaatt atttattact      1140
     ggcctcagcg gagtgaagaa aatagctgcg taccaattta aagatgcgta aggacttacc      1200
     cttgcctgac agggtcggta ggttattcat c                                     1231
//