ID   GQ258983; SV 1; linear; genomic RNA; STD; VRL; 1316 BP.
XX
AC   GQ258983;
XX
DT   19-MAY-2010 (Rel. 104, Created)
DT   20-MAY-2010 (Rel. 104, Last updated, Version 2)
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DE   Broome virus segment S1, complete sequence.
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KW   .
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OS   Broome virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
XX
RN   [1]
RP   1-1316
RX   DOI; 10.1016/j.virol.2009.11.048.
RX   PUBMED; 20350736.
RA   Thalmann C.M., Cummins D.M., Yu M., Lunt R., Pritchard L.I., Hansson E.,
RA   Crameri S., Hyatt A., Wang L.F.;
RT   "Broome virus, a new fusogenic Orthoreovirus species isolated from an
RT   Australian fruit bat";
RL   Virology 402(1):26-40(2010).
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RN   [2]
RP   1-1316
RA   Thalmann C.M., Wang L.-F.;
RT   ;
RL   Submitted (10-JUN-2009) to the INSDC.
RL   Commonwealth Scientific and Industrial Research Organisation (CSIRO),
RL   Livestock Industries Australian Animal Health Laboratory, Private Bag 24,
RL   Geelong, Victoria 3220, Australia
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DR   MD5; 74f76bd40f748685b9dd982bb50bd629.
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CC   GenBank Accession Numbers GQ258977-GQ258986 represent the complete
CC   genome of Broome virus from Pteropus scapulatus.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1316
FT                   /organism="Broome virus"
FT                   /segment="S1"
FT                   /host="Pteropus scapulatus (little red flying fox)"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:667093"
FT   CDS             13..1254
FT                   /codon_start=1
FT                   /product="core protein"
FT                   /note="dsRNA binding; sigma A"
FT                   /db_xref="InterPro:IPR004317"
FT                   /db_xref="UniProtKB/TrEMBL:D6MM26"
FT                   /protein_id="ACU68606.1"
FT                   /translation="MARVDFYFLTTSWNDAYFPLNEKQINELLSSSCSVWQNQNFLSYV
FT                   NSRTNNYMSNNFPCVGAFWYQRSCMLSGFLLIATDGPIAWRNESFRRMSWIDGCFEQVA
FT                   VTGDTTQDVVPRSNVWLNMFDARCWVNRAFVLRRIYPQMLRLTLLNASLFGPMFFIDVV
FT                   PLMFDDPTQMWLTSLIGHDFKDISYRLIQSTYNLPFELDGLHDRCIRALTLLFILSYTG
FT                   VVHQNRTLLGYYFQSKTRGLSTDAWTLRYNTTGQRVRPLAPNQQYYGIRSPSWNYSNDL
FT                   CYLCALSSIVLSCRIAPLIRNDSVIPPARDQHGFSSPRGLPVFYFSLTVAANACLLNWR
FT                   DGQLITDGEYREMNQQMTLEQLRQRHALEVILAHDDDSMAGPDGCRRIKPFTARDWTPG
FT                   QSGAAIAALRGLVG"
XX
SQ   Sequence 1316 BP; 336 A; 236 C; 308 G; 436 T; 0 other;
     gtcaaagtac acatggcgcg cgtcgatttt tattttttga cgacatcgtg gaatgatgcg        60
     tattttccat taaacgaaaa gcaaattaat gaactattgt cctcgtcatg tagtgtctgg       120
     cagaatcaaa acttcctcag ttatgttaat tcgcgtacta acaattatat gagtaataat       180
     tttccctgtg ttggagcgtt ttggtatcag cgaagctgca tgttgagtgg gttcttatta       240
     attgctactg acggtcctat agcatggaga aatgaaagtt ttaggcgtat gtcttggatt       300
     gacggttgct ttgagcaggt ggctgtgact ggtgatacta ctcaagatgt ggtacctagg       360
     agtaatgtct ggctaaatat gtttgatgct aggtgttggg tgaatcgcgc atttgtgttg       420
     cggcgtatat accctcaaat gcttcgattg acattgctta atgctagttt gtttggtcct       480
     atgtttttta ttgatgttgt gccactcatg ttcgatgatc caacgcaaat gtggttaaca       540
     agtttgattg gccatgattt taaagatata tcttatagat tgattcaatc tacttataat       600
     ttaccctttg aattggatgg tctgcatgat agatgcatcc gagctctcac tttactattt       660
     atactatcat acacaggtgt agtccatcaa aatcggacat tattggggta ttatttccaa       720
     agtaaaacac gtggtttatc tactgatgct tggaccttac ggtataatac gaccggacaa       780
     cgcgtgcgtc cattggctcc taatcagcaa tattatggta ttaggtcacc atcatggaat       840
     tattctaatg atttatgtta tttgtgtgct ttgagtagta tagtgttgtc gtgtcgcatt       900
     gctccgttga tacgtaatga tagcgttatc ccacctgctc gtgatcaaca cggcttttct       960
     tcaccgcgtg gattacctgt tttttatttc agtctaactg ttgctgcgaa cgcgtgtttg      1020
     ttaaattggc gggatgggca gctgataacc gatggtgaat atcgtgaaat gaatcagcaa      1080
     atgacgttgg aacaattacg acaacggcat gctttagaag tgattttagc gcatgatgat      1140
     gattcaatgg cgggtccaga tggatgtagg agaataaaac catttacagc acgcgattgg      1200
     acgcccggtc aatcaggagc tgctattgcc gcgttacgcg gattagttgg ttgatcgtca      1260
     aaaaacatcg acgcattgct cagctggcaa ctgcgcacgc ggtgtacgta atcatc          1316
//