ID   GQ258981; SV 1; linear; genomic RNA; STD; VRL; 2076 BP.
XX
AC   GQ258981;
XX
DT   19-MAY-2010 (Rel. 104, Created)
DT   20-MAY-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Broome virus segment M2, complete sequence.
XX
KW   .
XX
OS   Broome virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
XX
RN   [1]
RP   1-2076
RX   DOI; 10.1016/j.virol.2009.11.048.
RX   PUBMED; 20350736.
RA   Thalmann C.M., Cummins D.M., Yu M., Lunt R., Pritchard L.I., Hansson E.,
RA   Crameri S., Hyatt A., Wang L.F.;
RT   "Broome virus, a new fusogenic Orthoreovirus species isolated from an
RT   Australian fruit bat";
RL   Virology 402(1):26-40(2010).
XX
RN   [2]
RP   1-2076
RA   Thalmann C.M., Wang L.-F.;
RT   ;
RL   Submitted (10-JUN-2009) to the INSDC.
RL   Commonwealth Scientific and Industrial Research Organisation (CSIRO),
RL   Livestock Industries Australian Animal Health Laboratory, Private Bag 24,
RL   Geelong, Victoria 3220, Australia
XX
DR   MD5; 947065b5a31a1fa0b82786e3851f1698.
DR   EuropePMC; PMC3147939; 21593159.
XX
CC   GenBank Accession Numbers GQ258977-GQ258986 represent the complete
CC   genome of Broome virus from Pteropus scapulatus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2076
FT                   /organism="Broome virus"
FT                   /segment="M2"
FT                   /host="Pteropus scapulatus (little red flying fox)"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:667093"
FT   CDS             26..2050
FT                   /codon_start=1
FT                   /product="major outer capsid protein"
FT                   /note="muB"
FT                   /db_xref="GOA:D6MM24"
FT                   /db_xref="InterPro:IPR009113"
FT                   /db_xref="InterPro:IPR015960"
FT                   /db_xref="InterPro:IPR015961"
FT                   /db_xref="InterPro:IPR015962"
FT                   /db_xref="InterPro:IPR036256"
FT                   /db_xref="UniProtKB/TrEMBL:D6MM24"
FT                   /protein_id="ACU68604.1"
FT                   /translation="MGNYSSIVQNYNIRGDGNVFRPTADQRSSAVPTLQLRPGILNPGG
FT                   LAWRLLEGQTDPTAPGALVQVTTLDYPTLNVCNANNKTGLLPVSGQFIKNVKEEVIVIE
FT                   QSAICEFQKLQNAIELNRDYLSEQGILPQSANFSDYVVYIDCYVGLSAEQASRNFLRSV
FT                   PTTTRSRTTAYITIVQAALAQLNKWESALREVMTILPTSTSFGELECDMKSVVAYVDAV
FT                   LPDDNLCRLYPEQAAAAIAMRTGAVRWKDTTTGDTPLQASNSITSVTQSVIGNAVPLGE
FT                   KSDASIESLALVAKSNPDLVCSDRPTMGSVWSMLVPSKDYNIRAIPVLEAMWLRTTGDK
FT                   VGFDISWEEKAFNNTYHIAIRTGMKALFLDEISSCVLSVDFKDKNYTTPQFNPSGKVVS
FT                   LLVLSSKLPLEQITKPDDIMGIVEVSNVTLRAAPSSTQGASVIATTSLTYVFEREVLPI
FT                   DKSVHSYLLCMFRSNEPTNATNYPWFDAWDANTTISMLTAGEVTLNGVVTDTIVPTSLI
FT                   GAYTPEVLASALPNDAGEIMTARAQILAEAIKREDDTMVDEASPFSAPILGQLALQTKT
FT                   IGVGSIRGWDPPRWLKQASRALQMFLGNPKSILSVTTPVLKDPNVWVGLAQGVYDAIST
FT                   KSMSAGWRKAADRLNAAQSVRQWKQKVLGKIQKGFPPST"
XX
SQ   Sequence 2076 BP; 580 A; 365 C; 532 G; 599 T; 0 other;
     gtcaaatttc cacgtggtgt ataggatggg gaattactct tcaatagtgc agaactacaa        60
     tatacgtggt gatggtaatg tgtttcgtcc gacggcggat caacgatcta gtgctgttcc       120
     aacgttgcaa ttaagacctg ggatactgaa tccaggtggt ttggcatgga gactgttgga       180
     gggacagacg gacccaactg ctcctggtgc attagttcaa gttaccacac ttgactatcc       240
     tactttaaat gtttgcaatg ctaataataa aactggactt ctgccagtaa gtggtcaatt       300
     tattaaaaat gtaaaagagg aagttatagt gatagagcaa agtgcgattt gcgaattcca       360
     aaaacttcaa aatgcaattg aattaaatag ggattattta tctgagcagg ggatattgcc       420
     tcaatctgct aattttagtg actatgtcgt gtatattgat tgttatgttg gattgtctgc       480
     tgagcaagct agtagaaatt ttctgcgaag tgtaccgacg actactcgta gtagaaccac       540
     tgcatatatc acgattgtgc aggctgcttt agcgcaatta aataaatggg aatcggcgct       600
     gcgtgaggtt atgaccatct tacctacatc aacttctttt ggtgaattgg agtgtgatat       660
     gaaaagtgtg gttgcgtatg ttgatgcagt tttgccagat gataacttgt gtaggttgta       720
     tccagagcag gctgctgcgg caatagccat gagaacaggt gcagtgcgtt ggaaagatac       780
     tacaacaggt gatacgcccc ttcaagcttc gaattcaatc acatcagtca cacaatctgt       840
     tattggcaat gctgttcctt tgggtgagaa atctgatgca agtatagagt ctttggcatt       900
     ggttgctaag agtaatcctg atttggtatg tagtgatagg ccgacgatgg gttcagtatg       960
     gtctatgttg gtgccatcca aagattataa tataagagca atacctgtgt tagaagcgat      1020
     gtggttaagg accaccggtg ataaagttgg gtttgatata tcctgggaag agaaggcctt      1080
     taataacaca tatcatattg cgattcgtac gggtatgaaa gcgttgtttt tagacgaaat      1140
     atcttcgtgc gtcttatctg tggattttaa agataaaaat tatactacac ctcaatttaa      1200
     tccaagtggt aaagttgttt cattgttggt gttgagttct aagctaccat tagaacagat      1260
     tacgaaaccg gatgacatta tgggtatcgt agaggtgtcg aacgtaacat tgcgtgccgc      1320
     ccccagttcc acacagggtg catcggtcat agcgacgaca agtttgacgt atgtttttga      1380
     acgtgaagtt ttgccgatag ataagtcggt gcacagttat ttattgtgca tgttcagatc      1440
     gaatgaacct actaatgcca caaattatcc atggtttgat gcttgggacg ctaatactac      1500
     gatttcgatg ttgacggcag gtgaggtaac gttaaatggg gtagtgactg atacgattgt      1560
     tccgacatca ctgataggtg cgtatacgcc agaggtgtta gcttcagctt tgcccaacga      1620
     tgcgggggag attatgacgg ctcgtgccca aattttggcc gaagcaatta aacgtgaaga      1680
     tgatacaatg gtggatgaag cttcgccatt ttctgcacct atattgggac agctggcatt      1740
     acagacgaaa acgattggag tagggtcaat tcgaggatgg gatccaccac gatggttgaa      1800
     gcaagctagc cgtgcgttgc aaatgttttt gggtaatccc aagagtatat tgagtgtaac      1860
     gacacccgtg ttgaaagatc ctaatgtgtg ggtcgggtta gcgcagggcg tatatgatgc      1920
     gattagtaca aaatctatgt cggcgggatg gcgtaaagct gctgatagat taaatgcggc      1980
     tcagtcggtc cgtcaatgga agcaaaaagt tctgggcaaa atacagaagg ggttcccacc      2040
     tagcacctag tgcccacacc gtggaaggca ttcatc                                2076
//