ID GQ258980; SV 1; linear; genomic RNA; STD; VRL; 2327 BP. XX AC GQ258980; XX DT 19-MAY-2010 (Rel. 104, Created) DT 20-MAY-2010 (Rel. 104, Last updated, Version 2) XX DE Broome virus segment M1, complete sequence. XX KW . XX OS Broome virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus; OC unclassified Orthoreovirus. XX RN [1] RP 1-2327 RX DOI; 10.1016/j.virol.2009.11.048. RX PUBMED; 20350736. RA Thalmann C.M., Cummins D.M., Yu M., Lunt R., Pritchard L.I., Hansson E., RA Crameri S., Hyatt A., Wang L.F.; RT "Broome virus, a new fusogenic Orthoreovirus species isolated from an RT Australian fruit bat"; RL Virology 402(1):26-40(2010). XX RN [2] RP 1-2327 RA Thalmann C.M., Wang L.-F.; RT ; RL Submitted (10-JUN-2009) to the INSDC. RL Commonwealth Scientific and Industrial Research Organisation (CSIRO), RL Livestock Industries Australian Animal Health Laboratory, Private Bag 24, RL Geelong, Victoria 3220, Australia XX DR MD5; 6aa97913767993827fb381c7d0055a5a. XX CC GenBank Accession Numbers GQ258977-GQ258986 represent the complete CC genome of Broome virus from Pteropus scapulatus. XX FH Key Location/Qualifiers FH FT source 1..2327 FT /organism="Broome virus" FT /segment="M1" FT /host="Pteropus scapulatus (little red flying fox)" FT /mol_type="genomic RNA" FT /country="Australia" FT /db_xref="taxon:667093" FT CDS 21..2249 FT /codon_start=1 FT /product="core protein" FT /note="transcription factor; ssRNA and dsRNA binding; muA" FT /db_xref="GOA:D6MM23" FT /db_xref="InterPro:IPR012494" FT /db_xref="UniProtKB/TrEMBL:D6MM23" FT /protein_id="ACU68603.1" FT /translation="MAYVALPVPVASDALHGLKSTISNLLPDLHLDTCEHVYLLDQSIY FT IRQYERLSIGYDADMLTRAFLKRRWQSQSVIMYLPDKRGIIEYWRNNPRDRPDGLPKQL FT FGDIHTRSFEKALRDLKLTDFFSPCYVNNGGLKNLIAMLNPNDVVYSTTLDVIGAPIVM FT MFPQRYYDVMDNSLVKYYDIFKFGKRPKMAPPSRVYVGIVPSAGSGNSVSLNMDYWLPD FT ATDTTLLQLIQAYHAIYVNTSREVHPDVLGVMLRGEKHLKRAVDLSEARATRSLGITAK FT VARTMKTVNVSTCTVVDVHVRISCSVHEHLDVAKKLILIGVPEYILNHLEINHLGKLLY FT LRDEHGYFQKWFLLLVLFADRVYDTVKRKKIFISSPGYMDFFSMRITKLSCRRNQDIGV FT LRHGRLTSIAVAMNKGSFKSTILEFLNEFTVCDTRVFYGNTIQDSDEIGDSLHPTFEEQ FT LLTEMADHLDCFKSDVSALMRHANGTLDDDAICTIMYPIFMMLYKKVLVPEMQARMRAI FT NVSGRYLVLVHNDMEALGAGWGGELVRAYVNFDDEMNVLRRRGRIGDEWFQLALSRCYK FT MMATSTGTEPISLTLKRLFNPWFAIAPLIQDHPRNQTARVLAFYIPSGIMQKYGWCGCS FT QHTHVTITFIRGQMQDLQYLDGKDWRKYRARITVHPEVLDVVKDLRLIKTDVQWLSEPV FT PLDMFEGRVAMTPLQKYHMSLSCACKLPLAGFSYKAELTLAMVGEERH" XX SQ Sequence 2327 BP; 610 A; 383 C; 593 G; 741 T; 0 other; gtcaaaaacg catcgtcagc atggcatacg tggctttgcc cgttcctgtt gcatctgatg 60 ctcttcacgg cttaaagtcc actatttcta atttgttacc tgatttacat ctagatacat 120 gtgagcacgt gtatttatta gatcagtcaa tttacatccg tcagtatgaa cgactttcga 180 tcggttatga tgcggacatg ttgactagag ctttcttgaa gcgccgttgg caatctcaat 240 ctgtgattat gtatttacct gataaacggg gtatcattga gtattggcgt aataatccta 300 gggaccgacc tgatggctta cctaaacagc tatttggtga tattcatact agatcttttg 360 agaaagcttt acgtgattta aaattgactg atttcttttc gccgtgttat gtgaataatg 420 gaggattaaa gaatttgatt gctatgttaa atccaaatga tgtggtctat tcaacgactc 480 ttgatgtgat tggagcccca atagtaatga tgtttcctca gcgatattat gatgtgatgg 540 ataacagttt ggttaaatat tatgacattt ttaagtttgg caaacgccct aaaatggcac 600 caccgagcag ggtttatgta ggaatagtac catcagctgg ctctgggaat tctgtgagtt 660 taaatatgga ttattggcta cctgatgcga ctgataccac tttgctacaa ttgattcagg 720 cataccatgc tatttatgtt aatacatcgc gggaagttca tcctgatgtg cttggtgtta 780 tgttgcgggg tgaaaagcat ttaaagcgtg ctgtggatct tagtgaggca cgtgccacgc 840 gctcactagg gataaccgca aaagtggctc gtactatgaa gacagtaaat gtgtcaacat 900 gtactgtggt tgatgtgcat gtacggatat catgtagcgt gcatgagcat ttagatgttg 960 ccaaaaaatt aattcttatt ggtgtgcctg agtatatttt aaatcatttg gagattaatc 1020 atctggggaa gttgttatac ttgagagatg aacatggtta ttttcagaaa tggtttttgc 1080 tgctggtgtt atttgcggat agagtatatg acacagtgaa aaggaaaaag attttcatct 1140 ctagtccggg ttacatggac ttttttagca tgcgcattac taagctatca tgccggcgta 1200 atcaagatat tggtgtacta cgccatggtc gcttaactag catcgctgtc gctatgaata 1260 aggggagttt caagtcaacg attttggagt ttttgaatga gttcactgtg tgtgatactc 1320 gcgtgtttta tggaaatacg attcaagata gtgatgagat aggcgatagt ctgcatccca 1380 catttgagga gcaactgctg accgaaatgg ctgatcatct tgactgtttt aaatcggacg 1440 ttagtgcgct gatgcgacat gctaatggga cattggatga tgatgcaata tgcacaatta 1500 tgtatccgat attcatgatg ctatacaaga aggtgttggt acccgaaatg caggcgcgta 1560 tgcgtgcaat aaatgtgagc gggcgttact tggtacttgt gcataatgac atggaggctc 1620 tcggggctgg ttggggaggt gagctggtac gtgcttacgt aaactttgat gacgagatga 1680 atgttctgcg taggcgtgga cgtattgggg atgaatggtt tcagctggca ttgtctcgtt 1740 gttataaaat gatggcgact tcgactggga cggaaccaat atcgcttact ttgaagaggt 1800 tatttaatcc gtggtttgct attgctcctt tgattcagga tcatccacgg aatcagactg 1860 cacgggtgtt ggcattttac atccctagtg ggataatgca gaagtatggg tggtgtgggt 1920 gtagtcaaca tacacatgtg acgatcactt ttatacgtgg acagatgcaa gatttacagt 1980 atttggatgg taaggattgg cgtaaatatc gtgctagaat tactgtacat ccagaggtgc 2040 ttgatgttgt gaaggatcta cgattgatta agacagatgt gcaatggtta tctgaacctg 2100 tacccttgga catgtttgaa ggaagggttg caatgactcc tttgcaaaaa tatcatatgt 2160 cattaagttg cgcatgtaag ttaccattag cggggttttc atataaagcg gaattgacat 2220 tagcgatggt gggtgaggag cgtcattaat ggcggggtgt catggacggt gatacggcag 2280 tcagtttctg ccagggattg tcgatcatcg ttatgcgtgt cttcatc 2327 //