ID GQ258978; SV 1; linear; genomic RNA; STD; VRL; 3903 BP. XX AC GQ258978; XX DT 19-MAY-2010 (Rel. 104, Created) DT 20-MAY-2010 (Rel. 104, Last updated, Version 2) XX DE Broome virus segment L2, complete sequence. XX KW . XX OS Broome virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus; OC unclassified Orthoreovirus. XX RN [1] RP 1-3903 RX DOI; 10.1016/j.virol.2009.11.048. RX PUBMED; 20350736. RA Thalmann C.M., Cummins D.M., Yu M., Lunt R., Pritchard L.I., Hansson E., RA Crameri S., Hyatt A., Wang L.F.; RT "Broome virus, a new fusogenic Orthoreovirus species isolated from an RT Australian fruit bat"; RL Virology 402(1):26-40(2010). XX RN [2] RP 1-3903 RA Thalmann C.M., Wang L.-F.; RT ; RL Submitted (10-JUN-2009) to the INSDC. RL Commonwealth Scientific and Industrial Research Organisation (CSIRO), RL Livestock Industries Australian Animal Health Laboratory, Private Bag 24, RL Geelong, Victoria 3220, Australia XX DR MD5; ee129b0def7f709ea008fd19743bee2c. DR EuropePMC; PMC3147939; 21593159. XX CC GenBank Accession Numbers GQ258977-GQ258986 represent the complete CC genome of Broome virus from Pteropus scapulatus. XX FH Key Location/Qualifiers FH FT source 1..3903 FT /organism="Broome virus" FT /segment="L2" FT /host="Pteropus scapulatus (little red flying fox)" FT /mol_type="genomic RNA" FT /country="Australia" FT /db_xref="taxon:667093" FT CDS 14..3871 FT /codon_start=1 FT /product="mRNA-capping enzyme" FT /note="guanylyltransferase; methyltransferase; lambda C" FT /db_xref="GOA:D6MM21" FT /db_xref="InterPro:IPR010311" FT /db_xref="UniProtKB/TrEMBL:D6MM21" FT /protein_id="ACU68601.1" FT /translation="MAQFYGIRFGNTLNCPTQYRESVSYTYAKYCDDLSCLETKLPWRP FT LRNTRTNVVVAVQLFRPLQGTISSAYINEWPSEYESWVTWIKDRLACLRDILLQRFNMI FT DYYDALVNPIVANLICGLYLHSEPIGEIIESLFLRQTVYQDLRDMSVNVPGFLTYHSDS FT VELNAGRKYYRFNSYVYDDFDPCLFTKDCSNYGRVFFYRNDNDLMSSNIDALANGVVLC FT HYDRPSYGSHAIIPNVGNGVPFCGIVMDSVVGVMFEAVCEQLRNNQLASLSQQFSRLDE FT CYGFIRARMFESARDNVFIRLQQLGVLATNGFQLATRLDRYPTNKTIAELYQHLMFGSG FT DDFDVVVRPRVVYVFQDGPCVLDGLNDHYVRTTRRLGFNHGAITITDPVDGPIRVGIQY FT KHELVSKCDALSAMAEVSSSAIPIVFNDFWVGEPFTFSYVFSFLDLARDLHDIPNIPHE FT YFSLEHQYARDVFSKYRGLIDRSYYKDKAILRHVYSIKDPNDVLFMHDHMNVAYFGASG FT THPAREPTILREWRDGKLDGVSPPIKVTQFGYDVTKGMIIDVSVPFRSSVYTYIYSDID FT QVVDGGDDIDAATRVLFRCLDNMLGQLSHEGNITFKVNFPTTAVWRRLGQHYFPRFASF FT SIVKPMIANNIEIYVSCYGYETRRPRCDVRMGVHLFMASLYRRYAVFNRITDYLIPRGA FT LESSASGSGVFEINIPSHRVSASIDFMERAIAGMYALNYGGTIRMAHRDYYGVELLSLS FT GVKNEFAERRLARLDMCPKGDLRAILHQTRLIHYKPAEYFHDAATLWIAYTAFSNYMIY FT SLGVRQDTNLVADMGAGPEARILSLIPSDMPCLLLDVRPFAESLIGWKYETQFIIFDYL FT HDRWDNLPPFDTVICTLSLGAACASAQITMIEGIERFLNLCVLHGVKHILLQINCNLDG FT SSMGVRNELRIDDVNHQYNFLKYDRVEPYTDRRQVEHAIDKLSHCAYAWYTAPLDFDWV FT HFIWKGLSAVSTVGLQGCIELSRYMPFVVIDNPSTRLRYNNQPVVGQTFEFDIHGVNFV FT DDVVWWHDGVEVARYSNDVVTTLVGPIACTRRGNDIHVVWDLHMSGLFHLTLTDDELRG FT RIGSVFVEPPDPAIIFQPPTHWDQTVNGTKMVLNINTWYKLEVFVYSGDTRRVVNPDKY FT DLIDVAGTGYEFIWVCDRSDAFHRFVVHDTQSEAIGQYVHLELSDLTTHQWDETQVSLI FT SPPDRRRWQVESNGDVIATFNDGQIDVIPPNWVRQDISYSALDEFPTYMAPAGRYRLIR FT T" XX SQ Sequence 3903 BP; 988 A; 622 C; 965 G; 1328 T; 0 other; gtcaatttcc acgatggctc agttttatgg catacgtttc ggtaatacct taaactgtcc 60 aacacagtat cgagagtccg ttagttatac ttatgccaaa tattgtgatg atctatcttg 120 cttggagaca aagttacctt ggcgtccttt gcggaatacg aggacaaatg tagtagttgc 180 ggttcaatta ttccgtccat tacaaggtac gataagttcg gcttatatca atgaatggcc 240 atcggaatat gagtcatggg ttacatggat taaggatagg ttagcgtgtt tgcgggacat 300 tttactgcaa cgatttaata tgattgatta ttatgatgct cttgttaatc caatagtagc 360 taatcttata tgtggattgt atttacattc tgagcccatt ggtgaaataa ttgagtcttt 420 attcttgcgt caaacagttt atcaggattt acgtgatatg tcagtgaatg tgcctggttt 480 tctaacatac catagtgaca gtgttgagct gaatgcaggt aggaagtatt atcgttttaa 540 ctcatatgtg tatgatgatt ttgatccctg tctgttcact aaagattgta gtaattatgg 600 gagagtgttc ttttatcgta atgataatga cttaatgtct tcaaatattg atgctttggc 660 caatggtgtg gtgttatgtc attatgatcg acccagctac ggttcacatg ctattattcc 720 gaatgttggt aatggggttc ctttttgtgg aatagtgatg gatagtgtag tcggggtaat 780 gtttgaagct gtgtgtgaac aattacgtaa caatcagctt gcttcgctaa gtcaacaatt 840 ttcacgattg gatgaatgct atggtttcat cagggcacgg atgttcgaga gtgcgcgtga 900 taatgtgttc attcgtttac aacagttggg tgtacttgct acaaatggct ttcagttagc 960 gacacgtttg gatagatatc cgacaaataa gacgatcgct gaattatatc aacatttaat 1020 gtttggtagt ggggatgatt ttgacgttgt ggttagacct cgtgttgtgt atgtatttca 1080 agatgggccg tgtgttcttg atggtttaaa tgatcattat gtgcgtacta cgcgtcgatt 1140 aggatttaat catggtgcga ttacgattac tgatccggtt gatggcccta ttcgtgttgg 1200 catccagtat aaacatgaat tggtgtctaa gtgtgatgct ttaagtgcta tggctgaggt 1260 gtcgtcttct gcaatcccaa ttgtattcaa tgacttttgg gtcggtgaac cctttacttt 1320 tagttatgtt ttctccttct tggatttggc acgtgacttg catgacatac cgaatatacc 1380 tcatgaatat ttttcgttgg aacatcaata tgcgcgtgat gtatttagta agtatcgtgg 1440 attgattgac cgatcttatt acaaggacaa agctattttg cgtcatgtgt attcaattaa 1500 ggatcctaat gatgtgttat ttatgcacga tcatatgaat gtggcttatt ttggcgcatc 1560 tgggactcat cctgctcgtg aacctactat tcttcgagag tggcgagatg gcaagctgga 1620 tggtgtgtca ccaccaatta aagtgaccca gtttggttat gatgtcacaa agggtatgat 1680 catcgatgtt tctgtgcctt ttcgtagctc agtatatact tatatttata gtgatattga 1740 tcaagttgtt gatggtgggg atgatattga tgccgcgaca cgagtgctgt tccgttgctt 1800 ggataacatg ttgggtcagt tgtcacatga ggggaatatt acatttaagg tgaacttccc 1860 aacaacggca gtgtggcggc gtttaggaca acattatttt cctagatttg ctagtttttc 1920 tatagtgaaa ccaatgattg ccaataatat tgaaatttat gtgtcgtgtt atggttatga 1980 gacacgtcga cctaggtgtg acgtgcgtat gggcgtgcat ttgtttatgg cgagtttgta 2040 tcgtcgctat gcggtcttca atagaatcac tgattattta attccgagag gtgctctaga 2100 gagttcggct tctggatctg gagtgtttga aattaacatt ccgtcacata gggtctctgc 2160 ttcgattgat tttatggaac gagcgatagc aggtatgtat gcgcttaatt atggcggaac 2220 gattcggatg gctcatcgag attattatgg tgtggagtta ttatcattaa gtggggtgaa 2280 gaacgaattt gctgaacgtc gtttggcaag attggatatg tgtcctaaag gagatttgcg 2340 cgcaattttg catcagacta gattgattca ctacaaacca gccgaatatt tccatgatgc 2400 agccacatta tggatcgcat atactgcatt tagtaattac atgatttatt cgttgggagt 2460 acgtcaggat actaacttag tggctgacat gggtgctggg cctgaagctc gaattttatc 2520 tttgattcct agtgatatgc catgtttatt attagatgtg cgtccttttg ctgagtcttt 2580 aataggttgg aagtatgaaa cacaattcat catttttgat tatttgcatg accgttggga 2640 taatttgcca ccatttgata ctgttatctg cacattgagc ttaggtgcag cgtgcgctag 2700 tgctcagatt acgatgatag aaggaattga gcgtttttta aatttgtgtg tgctccatgg 2760 tgttaagcat attcttttgc aaattaactg taatttggat ggttctagta tgggtgtacg 2820 taatgagcta cgaattgatg atgtgaatca tcagtataat ttcttaaaat atgatagagt 2880 ggaaccatat actgatcgaa gacaggttga acatgccatt gacaagctat cccattgcgc 2940 ttacgcatgg tatacagctc cattggactt tgattgggtg catttcatat ggaaaggatt 3000 aagtgctgta tctactgtag gtttgcaggg ttgtatagaa ctgtcacggt acatgccgtt 3060 tgtggtgatt gataatccta gcacgcgtct gcgatataac aatcaacctg tggtcgggca 3120 gacttttgag tttgatatcc acggagtcaa ttttgttgat gatgtggtct ggtggcatga 3180 tggagtggag gtagctagat actccaatga tgtggttaca acgttggttg gacctattgc 3240 atgtaccaga cgggggaatg atatccatgt tgtgtgggat ttacatatgt cggggttatt 3300 tcatttgaca ttgactgatg acgaattgcg aggacgtata gggtcggtat tcgtggaacc 3360 accagatcct gcgattattt ttcaaccacc gacgcattgg gatcagacag ttaatggtac 3420 gaagatggtc ctaaatatta atacatggta taaattggaa gtgtttgtgt attcggggga 3480 tactcgtcgc gtcgttaatc ctgataagta tgacttgatt gatgttgctg gtactgggta 3540 tgagtttata tgggtatgtg ataggagcga tgctttccat agatttgtcg ttcatgatac 3600 gcagtctgaa gccattgggc aatatgttca tctcgaactt agtgatttaa ctacccatca 3660 atgggatgaa actcaggtat ctttgatttc accaccagat cggaggaggt ggcaggtgga 3720 aagtaacggt gatgtgattg ccacatttaa tgatgggcaa atagatgtga ttccacctaa 3780 ttgggtgcgg caagatatat cctacagtgc gttagatgag tttcctactt atatggcacc 3840 tgctggacga tacaggctga tccgaacgta ggccattgct agtgcgatgt ggatgtcttc 3900 atc 3903 //