ID GQ246941; SV 1; circular; genomic DNA; STD; VRL; 2744 BP. XX AC GQ246941; XX DT 07-JUL-2009 (Rel. 101, Created) DT 07-JUL-2009 (Rel. 101, Last updated, Version 1) XX DE Tomato leaf curl Vietnam virus isolate Haiphong 23 segment DNA A, complete DE sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2744 RA Thanh T.N., Vinh D.N., Mukherjee S.K.; RT ; RL Submitted (29-MAY-2009) to the INSDC. RL Plant Molecular Biology, International Center for Genetic Engineering and RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; 3045f70a59df5d96cb357bb1920d9385. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA A" FT /host="tomato" FT /isolate="Haiphong 23" FT /mol_type="genomic DNA" FT /country="Viet Nam:Dongthai" FT /db_xref="taxon:208177" FT gene 125..475 FT /gene="AV2" FT CDS 125..475 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:C6KJF5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C6KJF5" FT /protein_id="ACS94054.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKQKEVMGQSAHV FT PQAQDVQNVQKP" FT gene 285..1058 FT /gene="AV1" FT CDS 285..1058 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C6KJF6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C6KJF6" FT /protein_id="ACS94055.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYANRAVAPTVLVTNKRRSW FT VNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLTH FT RVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1055..1459) FT /gene="AC3" FT CDS complement(1055..1459) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:C6KJF7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C6KJF7" FT /protein_id="ACS94056.1" FT /translation="MDSRTGEPITATQAENGVFTWEITNPLYFKITELQNRPFLSNNDI FT VTVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVNSSHVIKFNLY" FT gene complement(1200..1607) FT /gene="AC2" FT CDS complement(1200..1607) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="RNAi suppressor" FT /db_xref="GOA:C6KJF8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C6KJF8" FT /protein_id="ACS94057.1" FT /translation="MQSSSASPSHSTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSAI FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQTLPVEQRHSDGQDPIQLQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT gene complement(1507..2595) FT /gene="AC1" FT CDS complement(1507..2595) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:C6KJF9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C6KJF9" FT /protein_id="ACS94058.1" FT /translation="MPPPKKFLINAKNYFLTYPHCSLSKEEALSQFLALTTPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFKCQNNRFFDLVSPTRSAHFHPNIQSAKSSTDVKAYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKATALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISLVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNNALKSWAIKNAVFVSITEPL FT YSSTYQSPAQDSQEENNQETED" FT gene complement(2145..2438) FT /gene="AC4" FT CDS complement(2145..2438) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C6KJG0" FT /protein_id="ACS94059.1" FT /translation="MGLLTCMSSSSSKENSNAKTTDSSISYPQPGQHISIRTFRALKAQ FT QMSKPTWTKTETCLIMEFSRSMEDRLEEVASLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2744 BP; 740 A; 567 C; 610 G; 827 T; 0 other; accggatggc cgcgattttt ttaccgtgga ccccgccact aaattttgtc ggccattaga 60 aacgctccct caaattatgc aacggcctcc tataaaactt ggtccccaag tactcattcc 120 aaacatgtgg gatccgcttt taaacgagtt tcccgaaacc gttcacggtt ttaggtgtat 180 gctagcgatt aaatatttgc aattagtaga aaatacatac tctcccgata cattagggta 240 cgacttaata cgtgatttaa tcttagtcat tcgtgccagg gattatgtcg aagcgtcccg 300 cagatatagt catttccact cccgcatcca aggtgcgtcg ccggctgaac ttcgacagcc 360 cgtatgccaa ccgtgctgtt gcccccactg tcctcgtcac aaacaaaagg aggtcatggg 420 tcaatcggcc catgtaccgc aagcccaaga tgtacagaat gtacaaaagc cctgatgttc 480 cacgaggatg tgaaggccca tgtaaagtcc agtcttatga acagcgtcat gatatagccc 540 atgtagggaa ggtaatttgt gtgtctgatg ttacacgtgg taacgggttg actcatcgtg 600 ttggtaagag gttctgtatt aagtcagttt atgttttggg taagatctgg atggatgaga 660 atattaagac gaagaatcat actaatacgg tcatgttctt tttagtacgt gatagaagac 720 cttatggaac tccccaagat tttggtcagg tgtttaacat gtatgataac gagccaagta 780 cagccacggt gaagaacgat aacagagatc gttttcaagt tcttcgtcga tttcaggcaa 840 ctgttactgg tggtcagtat gcaagcaagg agcaagcaat agtcaggaaa ttcatgaagg 900 tgaacaacca tgtgacgtat aatcatcaag aggctgctaa gtatgataac cacacagaga 960 atgctttgtt attgtatatg gcatgtactc atgctagtaa cccagtgtat gctacgttaa 1020 aaatcaggat ctatttctat gattctgttc agaattaata aagattaaat tttattacat 1080 gagaactgtt tacaaatgtt gtttgcgtta atgcgtccca taatacataa ttgactgctc 1140 taattacatt attcaaacta attacaccca aattattgag aaacttcaaa acttgtgtcc 1200 taaatactct taagaaacga ccagtctgaa ggtgtgagtt cgtccatatc cggaagtcca 1260 gaaaacattg gtgcatcccc agtgctttcc tcaggttgta gttgaattgg atcctgaccg 1320 tcactatgtc gttgttcgac aggaagggtc tgttttgtag ttccgttatc ttgaaataca 1380 ggggatttgt tatctcccag gtaaaaacgc cattctctgc ctgagttgca gtgatgggtt 1440 cccctgtgcg tgaatccatg gttggcgcag ttaattgcgc tgaaataaga acaaccacag 1500 ggaaggtcaa tcctccgtct cctggttatt ttcttcttgg ctatcctgtg ctggactttg 1560 ataggtactt gagtagagtg gctcggtgat gctgacgaag actgcattct ttattgccca 1620 cgactttaat gcattattct tttcctcgtc taggtattct ttatagcttg agttgggccc 1680 tggattgcac aggaagatag ctggaatgcc acctttaatt tgaaccggtt ttccgtactt 1740 tgtgttgctt tgccagtccc tttgggcccc cataaattct ttgaaatgct ttaggtagtg 1800 cggatcaacg tcatcaatta cgttatacca ggcatcatta ctgtacacct ttggactcaa 1860 atcaagatga ccacagagat aattgtgtgg acccaatgat cgagcccaca tcgtcttccc 1920 cgtcctgcta tcaccctcta tgactaaact tattggtcgt aatggccgcg cagcggaact 1980 gacgacgttc tctgcagccc actcttcgag ttcctctggg actcgatcaa acgaagaaga 2040 agaaaaagga gaaacgtaaa cctccattgg aggagtaaaa atcctatcta aattactatt 2100 taaattatga aactgtaaaa caaaatcttt gggagctttc tcccttaata tattgagggc 2160 cgtagctttg gaccctgaat tgattgcctc ggcatatgcg tcgttggcag actggcaacc 2220 tcctctagcc gatcttccat cgatctggaa aactccatga tcaagcacgt ctccgtcttt 2280 gtccatgtag gctttgacat ctgttgagct tttagcgctc tgaatgttcg gatggaaatg 2340 tgctgacctg gttggggata cgagatcgaa gaatctgttg ttttggcatt tgaattttcc 2400 ttcgaactgg atgaggacat gcaggtgagg agacccatct tcgtgtagtt ccctgcagat 2460 tcgaatgaat aatttattgg ttggtgtcgt tagggctaaa aattgggaaa gtgcctcttc 2520 tttgcttaat gagcaatgtg ggtatgtgag gaaataattt ttggcattta ttagaaattt 2580 tttgggcgga ggcatgttga cttggtcaat cgggtcctct caaacttagc tatgcaatcg 2640 gggaatgggt ccttatttat atgtgaggac ctaaatggca taatcgtaaa taatcatgtg 2700 aatttcaaaa ttcaaattcc aaaagcggtc atccgtataa tatt 2744 //