ID GQ246940; SV 1; circular; genomic DNA; STD; VRL; 2747 BP. XX AC GQ246940; XX DT 07-JUL-2009 (Rel. 101, Created) DT 07-JUL-2009 (Rel. 101, Last updated, Version 1) XX DE Tomato leaf curl Vietnam virus isolate Hai Duong 120 segment DNA A, DE complete sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RA Thanh T.N., Vinh D.N., Mukherjee S.K.; RT ; RL Submitted (29-MAY-2009) to the INSDC. RL Plant Molecular Biology, International Center for Genetic Engineering and RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; 8f7fd6645e96c87b83867a2f4105bf7f. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA A" FT /host="tomato" FT /isolate="Hai Duong 120" FT /mol_type="genomic DNA" FT /country="Viet Nam:Binh Giang" FT /db_xref="taxon:208177" FT gene 130..480 FT /gene="AV2" FT CDS 130..480 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:C6KJE9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C6KJE9" FT /protein_id="ACS94048.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRAKDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PQAQDVQNVQKP" FT gene 290..1066 FT /gene="AV1" FT CDS 290..1066 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C6KJF0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C6KJF0" FT /protein_id="ACS94049.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVNRAVAPTVLVTNKRRSW FT VNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCIKSVYVFGVRSGMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDN FT EPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1063..1467) FT /gene="AC3" FT CDS complement(1063..1467) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:C6KJF1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C6KJF1" FT /protein_id="ACS94050.1" FT /translation="MDSRTGELITATQAENGVFTWEITNPLYFKITEIQNRPFLSNNDI FT VTVRIQFNYNLRKALGMHQCFLDFRIWTTSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWEALTQTTFVNSSHVIKYNLY" FT gene complement(1208..1615) FT /gene="AC2" FT CDS complement(1208..1615) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="RNAi suppressor" FT /db_xref="GOA:C6KJF2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C6KJF2" FT /protein_id="ACS94051.1" FT /translation="MQSSSASPNRCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSAL FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGNSKQTLPVEQRHSDGQDPIQLQ FT PEESTGDAPMFSGLPDMDDLTPSDWSFLKSI" FT gene complement(1515..2603) FT /gene="AC1" FT CDS complement(1515..2603) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:C6KJF3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C6KJF3" FT /protein_id="ACS94052.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLMQFEGKFQCKNQRFFDLISPSRSAHFHPNIQAAKSSTDVKAYM FT DKDGDVLDHGVFQIDGRSARGGCPVCNDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHLKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAVFVSITEPL FT YSSTYQSPAQDSEEENNQETED" FT gene complement(2153..2446) FT /gene="AC4" FT CDS complement(2153..2446) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C6KJF4" FT /protein_id="ACS94053.1" FT /translation="MELLTCMFSCNSKGNSNVKTKDSSISYPQAGQHISIRTFRQLKAQ FT QMSKPTWTKTETCLIMEFSKSMEDQLEEVAQSATTHMPRQSIQGPKHRPSIY" XX SQ Sequence 2747 BP; 729 A; 558 C; 609 G; 851 T; 0 other; accggatggc cgcgattttt tttagtggtc ccccccacta ttatttgtcg gccaatacag 60 acgctccctc aaagcttatt tgtgtaacgg tcccctataa aacttggtcc ccaagtactc 120 attccaaaca tgtgggatcc gcttttaaac gagtttcccg aaaccgttca cggttttagg 180 tgtatgctag ccattaaata tttgcaatta gtagaaaata catactctcc tgatacatta 240 gggtacgatt taatacgtga tttaatttta gtcattcgtg ccaaggatta tgtcgaagcg 300 tcccgcagat atagtcattt ccactcccgc atccaaggtg cgtcgccggc tgaacttcga 360 cagcccgtat gtcaaccgtg ctgttgcccc cactgtcctc gtcacaaaca aaaggaggtc 420 atgggtgaat cggcccatgt accgcaagcc caagatgtac agaatgtaca aaagccctga 480 tgttccacga ggatgtgaag gcccatgtaa agtccagtct tatgaacagc gtcatgatgt 540 agcccatgta gggaaggtaa tttgtgtgtc tgatgttaca cgtggtaatg ggttgactca 600 tcgtgttggt aagaggttct gtattaagtc agtttatgtt tttggggtaa gatctgggat 660 ggatgagaac attaagacga agaatcatac taatacggtc atgttctttt tagtacgtga 720 tagaagacct tttggaactc cccaagattt tggtcaggtg tttaacatgt atgataacga 780 gccaagtaca gccacggtga agaacgataa cagagatcgt tttcaagttc ttcgtcggtt 840 tcaggcaact gttactggtg gtcagtatgc aagcaaagag caagcaatag ttaggaagtt 900 tatgaaggtg aacaaccatg tgacttataa tcatcaagag gctgcgaagt atgataacca 960 cacagagaat gctctgttat tgtatatggc atgtactcat gctagtaacc cagtgtatgc 1020 tacgttaaaa atcaggatct atttctatga ttctgttcag aattaataaa gattatattt 1080 tattacatga gaactgttta caaatgttgt ttgcgttaat gcttcccata atacataatt 1140 tactgctcta attacattat tcaaactaat tacacccaaa ttattgagaa atttcaaaac 1200 ttgtgtccta aatactctta agaaacgacc agtctgaagg tgtgaggtcg tccatatccg 1260 gaagtccaga aaacattggt gcatccccag tgctttcctc aggttgtagt tgaattggat 1320 cctgaccgtc actatgtcgt tgttcgacag gaagggtctg ttttgaattt ccgttatctt 1380 gaaatacagg ggatttgtta tctcccaggt aaaaacgcca ttctctgcct gagttgcagt 1440 gatgagttcc cctgtgcgtg aatccatggt tggcgcagtt aagtgcgctg aaataggaac 1500 aaccacaggg aagatcaatc ctccgtctcc tggttatttt cttcttcgct atcctgtgct 1560 ggactttgat aggtacttga gtacagcggt tcggtgatgc tgacgaagac tgcattcttt 1620 attgcccacg actttaatgc agtattcttt tcctcgtcta ggtattcttt atagcttgag 1680 ttgggccctg gattgcacag gaagatagct ggaatgccac ctttaatttg aaccggtttc 1740 ccgtactttg tgttgctttg ccagtccctt tgggccccca tgaattcttt taaatgcttt 1800 aggtagtgcg gatcaacgtc atcgatgacg ttgaaccagg catcattact gtacaccttt 1860 ggactcaaat caagatgacc acacagataa ttgtgtggac ccagtgatcg agcccacatc 1920 gtcttccccg tcctgctatc accctctatg actatactta ttggtcgtaa tggccgcgca 1980 gcggaactga cgacgttctc tgcagcccac tcttcgagtt cttctgggac tcgatcaaac 2040 gaagaagaag aaaaaggcga aacgtaaacc tccattggag gagtaaaaat cctatctaaa 2100 ttactattta aattatggaa ttgtaaaaca aaatctttgg gagctttctc ccttaatata 2160 ttgagggccg atgctttgga ccctgaattg attgcctcgg catatgcgtc gttgcagact 2220 gggcaacctc ctctagctga tcttccatcg atttggaaaa ctccatgatc aagcacgtct 2280 ccgtctttgt ccatgtaggc tttgacatct gttgagcttt tagctgcctg aatgttcgga 2340 tggaaatgtg ctgacctgct tggggatatg agatcgaaga atctttggtt tttacattgg 2400 aatttccctt cgaattgcat gagaacatgc aggtgaggag ttccatcttc gtggaattct 2460 ctacagatgc ggataaatag tttatttact ggggtttcta ggtttttaag ttgggaaagt 2520 gcttcttctt tagtgagaga gcagtgtgga tatgtgagga aataattttt ggcatttatt 2580 ctgaatttat taggaggagc cattgactgg tcaatcggtg tctcttaaac ttggctatgc 2640 aattggtgtc tggtgtctta tttatatgtg gacaccaaat ggcattatcg taattcccaa 2700 aagaaattca aaatttaaat tggtaaagcg gccatccgta taatatt 2747 //