ID GQ229101; SV 1; linear; genomic RNA; STD; VRL; 3514 BP. XX AC GQ229101; XX DT 02-JUN-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate BA2-JB segment RNA2, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-3514 RA Jonson G.-M., Kim K.-H., Choi H.-S., Kim J.-S., Choi I.-R.; RT "Sequence and phylogenetic analyses of the complete sequence of RNA1 and RT RNA2 segments of Korean Rice stripe virus isolates and with those reported RT isolates from China and Japan"; RL Unpublished. XX RN [2] RP 1-3514 RA Jonson G.-M., Kim K.-H., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (29-MAY-2009) to the INSDC. RL Department of Agricultural Biotechnology and Plant Genomics and Breeding RL Institute, Seoul National University, 599 Gwanak-ro, Daehak-dong, RL Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; c2ce15a8120fc2cd4b4f2b26482ab43d. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA2" FT /host="Oryza sativa japonica" FT /isolate="BA2-JB" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:3052763" FT CDS 81..680 FT /codon_start=1 FT /product="NS2" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:D7NND4" FT /protein_id="ADE60710.1" FT /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDHYLNSLDAI FT WLMGCCEEFTDPALRAHALAIATESNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL FT ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV FT TNGIPISRNFNEIALPDPSPSDDYVLVGAHECPILM" FT CDS complement(980..3484) FT /codon_start=1 FT /product="putative membrane glycoprotein" FT /db_xref="GOA:D7NND5" FT /db_xref="InterPro:IPR009547" FT /db_xref="UniProtKB/TrEMBL:D7NND5" FT /protein_id="ADE60711.1" FT /translation="MHFKSYFIYTTIFNMAWGAPILFPDTHSWMRNREREPSEIVKVPC FT SARAPPCKLTYELNGYFIENGLICYNRASVNYFETCYTGNYDYKLPLRPSFSKFGGHVY FT LICDDAILQNVSLVGIQQTDYTSSPLLITNSNSEKISYSNLKTGFLGIVYAVETRACIQ FT PDQAKKPEEIMNHGVAIKPSCTDGVLYYINSACEVNVSDQTFSIPSCESVKLPTYDDTI FT EVCDKGGCQNVTCHPGEICDKYERMDMIMRIKNYQCSHIYRYSLYSIILFFVIVIVFTL FT ITIMNILFFLKPAFWLLKKVLYSMVGLCHRRPVVDEVSVDMSTVRVVDEAEEGLLVVED FT SIAPNTNVSEKVKRKGRKVENGLIFIPYILMILLLVCTAESCQDLVSSISNIERCTNNS FT CDFISKMKLTLLSTPQDFCFKTSTDVYKIRFNSVRVMCLSVPLYYTNSFKRVISREEWK FT CFEGEGCRTDGTHSIWGESTSLSFDYCVTDFHIFSYCPAYHYNWKRIEYEPTSSRACTI FT MKCMDTKFEIVGYIQKNGHVLKELGGITSKYDSPLVSISLSNYNSARMPREYAECDGKA FT YLRTANDLGSFDKELLGNIQCPTKEDAVVLSSKCKTKILSNEDLPVIRYIERDGVDMLE FT HVKSEPLKDVLVSSSGISLSTLDLFPVELNLQFKEAITSIITSKISLNGTSCKITGIER FT KFKKTTVSIESSNKVYLSDILACEGLAVCPMILNNIKKGTCITTTYYSVTIGSMIKCKF FT IYSGDTLMCKYDVSPLEITVISPGLDVSSFEAVKTSTTNWMELLAGIVKDNPKLSLVAS FT IIPIGLILKTIRSFLDDIRQVD" XX SQ Sequence 3514 BP; 1066 A; 737 C; 639 G; 1072 T; 0 other; acacaaagtc ctgggtatat aagccacata tatcatataa atctaacaga agtcgtccac 60 ggagaatctc gtcttcagca atggcattac tccttttcaa tgatcactac tatggttttc 120 tccataagta taaaagacat actggatcat atgataatct cttcaatttg aggtgctcta 180 aagaagacca ctatttgaac tctcttgatg ccatctggct catgggatgc tgtgaggagt 240 tcacagatcc agctcttaga gcacatgctc tcgccatagc aactgaatcc aacataggtt 300 tggttaacaa taatgccgtt atatctgatg agaggctgaa gtgctggctc tgtaaaaaac 360 catctcatca acagactgag catctgaaac tgatcttgtt gcccaatttg gtcaacgggt 420 ttcagtttgc tacagagtca tatcatatat gcctgaagga tcactctgga gatgacccta 480 cacaatatct tagtgaattc tcctttccca caggattaag agcctactac aagccacatc 540 agaagatgga gcataaacat atagttgtga ccaatggaat acccatctca aggaatttca 600 atgaaattgc tctccctgac ccatctccaa gtgatgacta tgtcttggtt ggagcacatg 660 agtgccctat tctaatgtga acttggaaga taatattgac tgtggcctac aggcacatac 720 acacactggc ctcaaacact aaaatggtgc tatgcatcaa tttataatct tatatcctcg 780 aaatggtgct acgcaccaca tccggatggt gagcctagct cactttgatt attgagtaaa 840 ttaatgaaaa caaacaagta taattgtaac tataatagct ttcttattat tatgtgatca 900 gtacgcttaa aactacacac taaagcttaa gagaagatta ctaatggaaa tatgagaata 960 cataagtgaa cctattggct taatcaacct gtctgatgtc atctagaaaa ctcctaatgg 1020 tcttcaaaat gagtcctatt ggtattattg aagccactag agataacttt gggttatcct 1080 tgactatccc ggctagcaat tccatccaat tggtggtgct ggtcttcaca gcttcaaaag 1140 agctcacatc aaggcccggc gatatcacgg tgatttccaa tggtgaaaca tcatacttgc 1200 acataagagt atcaccagag tatatgaatt tgcatttgat catggaacca attgtgaccg 1260 aatagtaagt tgttgttatg catgtgcctt ttttaatgtt gttcagtatc atagggcaaa 1320 ctgccaatcc ctcgcaggcc aagatatcac tgagatagac tttgtttgaa gattcaatgc 1380 ttacagttgt cttcttaaat ttcctctcta taccagtaat cttgcatgag gtcccattga 1440 gggatatctt actagttatt atactggtga tcgcttcctt gaattgcaag ttcagctcta 1500 ctggaaacaa atccaaagtg cttagagata taccagagct agagaccaac acatccttta 1560 agggttcact tttcacatgc tctagcatgt ccactccatc cctctctata tacctaataa 1620 ctggcaaatc ttcatttgaa agtatcttag ttttacactt actgctaaga acaacagcat 1680 cttctttagt tggacactgt atgttgccta gtaactcttt gtcaaaagac cccagatcat 1740 ttgcggtcct taaataagct ttcccatcac actctgcata ttctctaggc attctggcac 1800 tattatagtt tgacaatgat atagaaacta aagggctatc atacttacta gtaatgcctc 1860 ctagttcttt caacacatgt ccattttttt gaatataccc aactatttca aatttagtat 1920 ccatgcactt cattatggtg catgctctag aagatgttgg ttcatattct attctcttcc 1980 aattgtagtg gtatgctggg caataggaaa agatgtggaa atcagtgaca caataatcga 2040 agctcagact agtggattcc ccccatatcg agtgtgttcc atcagttctg caaccttccc 2100 cttcaaagca cttccattcc tctctagaga tcaccctttt gaaactgtta gtataataca 2160 gaggcactga taagcacata actcgaacac tattaaaacg tattttgtag acatcagtcg 2220 atgtcttgaa gcagaaatcc tgaggagtgc ttagtagggt cagtttcatt ttagagatga 2280 agtcacaact attatttgtg cacctctcta tattggaaat gcttgaaaca aggtcttgac 2340 aggattctgc agtacacact aatagtaaga tcatcaatat atatggtatg aatatcagtc 2400 cattctctac ttttctaccc ttccttttca ctttctcaga aacattagtg ttaggtgcaa 2460 tggagtcttc tacaactaat aggccctcct ctgcttcatc cactactcta actgttgaca 2520 tatctacgga tacttcatct acaacaggtc tcctatgaca tagcccaacc atagaatata 2580 gcaccttctt tagcagccaa aatgcaggtt ttaggaaaaa taagatattc attatggtga 2640 tgagagtgaa tactattact atgacaaaga acaagattat agagtacaat gaatatctgt 2700 agatgtggga gcattgataa ttctttattc tcattatcat gtccattctc tcatacttgt 2760 cacaaatctc tcctgggtga caagttacat tttgacaacc acccttatca caaacttcaa 2820 tagtatcatc ataagttgga agtttgactg attcacaaga agggatagaa aatgtttggt 2880 cactcacatt gacctcacat gcagaattga tataatacag cacaccatct gtgcaagagg 2940 gcttgattgc aacaccatga ttcatgattt cttctggttt cttagcttgg tcaggttgaa 3000 tgcatgccct agtctcaaca gcatacacta ttcccaagaa accagtttta agatttgagt 3060 atgaaatctt ttcagaattg gaattggtta tcaacagagg gcttgatgtg tagtctgttt 3120 gctgtatgcc taccagagac acattctgca gaatggcatc atcgcaaatg agatagacgt 3180 gaccaccgaa cttagagaaa gaaggacgga gaggcagctt gtaatcgtag tttccagtgt 3240 agcatgtctc aaagtagttc acactagccc tgttgtaaca aatcagacca ttttcaatga 3300 aatatccatt cagctcatag gttaatttgc agggaggggc tctggcactg caagggacct 3360 tgacaatctc agatggttcc ctctccctgt tcctcatcca agaatgggtg tcagggaaaa 3420 ggattggtgc accccacgcc atattaaaga ttgtggtgta gatgaaatat gatttaaaat 3480 gcatcttaga agaagttata cccagacttt gtgt 3514 //